RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 JOSD1Q15040 202 aaPredicted RBP2.67□□□□□ -1.98
VPS13C-203ENST00000395896 TMEM256Q8N2U0 113 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 ST20Q9HBF5 79 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 TGIF2-C20orf24A0A0A6YYL0 155 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 A8MWV9 139 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.67□□□□□ -1.98
VPS13C-203ENST00000395896 BRD3OSQ6XYD6 125 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 SMG1Q96Q15 3661 aaKnown RBP2.67□□□□□ -1.98
VPS13C-203ENST00000395896 ACTL10Q5JWF8 245 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 Q6ZPA2 131 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 BCL6BQ8N143 479 aaPredicted RBP2.67□□□□□ -1.98
VPS13C-203ENST00000395896 SPAG8Q99932 426 aaPredicted RBP2.67□□□□□ -1.98
VPS13C-203ENST00000395896 INSP01308 110 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 CTSGP08311 255 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 ZNF414Q96IQ9 312 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 DUX5Q96PT3 197 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 C20orf144Q9BQM9 153 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 C2orf88Q9BSF0 95 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 CYSLTR1Q9Y271 337 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 OR11H12B2RN74 326 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 GCSAMLQ5JQS6 135 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 Q86TA4 180 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 NUDT10Q8NFP7 164 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 NUDT11Q96G61 164 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 LINC00587B1AMM8 73 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 RNF223E7ERA6 249 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 LY6LH3BQJ8 138 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 IGHG4P01861 327 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 CFHR4Q92496 578 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 MRAP2Q96G30 205 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 HSPB9Q9BQS6 159 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 TSSC4Q9Y5U2 329 aaPredicted RBP2.67□□□□□ -1.98
VPS13C-203ENST00000395896 RELNP78509 3460 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 ADCYAP1P18509 176 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 IFI27P40305 119 aaPredicted RBP2.67□□□□□ -1.98
VPS13C-203ENST00000395896 UQCRFS1P47985 274 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 GTF2H5Q6ZYL4 71 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 OR8A1Q8NGG7 326 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 MBD6Q96DN6 1003 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 PRELID3AQ96N28 172 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 FOXC2Q99958 501 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 MIEN1Q9BRT3 115 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 TNFRSF18Q9Y5U5 241 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 IGHV3-35A0A0C4DH35 117 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 CBY3A6NI87 242 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 LINC00518Q8N0U6 118 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 EXOC3-AS1Q8N2X6 119 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 TBX15Q96SF7 602 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 NDUFAF3Q9BU61 184 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 MDKP21741 143 aaPredicted RBP2.67□□□□□ -1.98
VPS13C-203ENST00000395896 DPH3P1Q9H4G8 78 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 YAE1D1Q9NRH1 226 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 KLF17Q5JT82 389 aaPredicted RBP2.66□□□□□ -1.98
VPS13C-203ENST00000395896 TMEM219Q86XT9 240 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 STHQ8IWL8 128 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 OR11H1Q8NG94 326 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 OR11H2Q8NH07 326 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 NUDT3O95989 172 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 LINC00205P59089 165 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 DUX4L9Q6RFH8 374 aaPredicted RBP2.66□□□□□ -1.98
VPS13C-203ENST00000395896 SCGB1D4Q6XE38 83 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 C22orf34Q6ZV56 151 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 NUP35Q8NFH5 326 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 FOXA3P55318 350 aaPredicted RBP2.66□□□□□ -1.98
VPS13C-203ENST00000395896 ZNF502Q8TBZ5 544 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 HIST1H2BLQ99880 126 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 M0R381 172 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 FOSL1P15407 271 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 PGLYRP4Q96LB8 373 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 VSIRQ9H7M9 311 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 PRSS46E5RG02 174 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 LTAP01374 205 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 IGLC2P0DOY2 106 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 SLC25A34Q6PIV7 304 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 ATRAIDQ6UW56 229 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 C8orf86Q6ZUL3 223 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 IGKV1OR2-108A0A075B7D4 117 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 SMIM27A0A1W2PRY6 76 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 TEX22C9J3V5 150 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 TFF1P04155 84 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 LGALS1P09382 135 aaKnown RBP2.66□□□□□ -1.98
VPS13C-203ENST00000395896 CD7P09564 240 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 DDTP30046 118 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 ZNF329Q86UD4 541 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 HAPLN4Q86UW8 402 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 HAX1O00165 279 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 FOXI2Q6ZQN5 318 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 FAM167A-AS1Q96KT0 104 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 ODF3Q96PU9 254 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 H0Y8G0 127 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 VCYO14598 125 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 SRSF3P84103 164 aaKnown RBP2.66□□□□□ -1.98
VPS13C-203ENST00000395896 KLRD1Q13241 179 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 Q8N7P7 452 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 SLC25A2Q9BXI2 301 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 M0R3E3 92 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 SLC17A3O00476 420 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 ZNF415Q09FC8 603 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 COL5A1-AS1Q5SY13 56 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 KLHL30-AS1Q8NEE0 82 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms