RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 V9GYV3 84 aa15.27■□□□□ 0.03
HDDC3-202ENST00000394272 K7EQG2 157 aa15.26■□□□□ 0.03
HDDC3-202ENST00000394272 LINC00322Q6ZN03 302 aaPredicted RBP15.26■□□□□ 0.03
HDDC3-202ENST00000394272 PFN1P07737 140 aaKnown RBP15.25■□□□□ 0.03
HDDC3-202ENST00000394272 ID1P41134 155 aa15.25■□□□□ 0.03
HDDC3-202ENST00000394272 ERCC8Q13216 396 aa15.25■□□□□ 0.03
HDDC3-202ENST00000394272 PRR27Q6MZM9 219 aa15.25■□□□□ 0.03
HDDC3-202ENST00000394272 C9orf47Q6ZRZ4 202 aa15.25■□□□□ 0.03
HDDC3-202ENST00000394272 COX8CQ7Z4L0 72 aa15.25■□□□□ 0.03
HDDC3-202ENST00000394272 WFDC3Q8IUB2 231 aa15.25■□□□□ 0.03
HDDC3-202ENST00000394272 Q8TAT8 98 aa15.25■□□□□ 0.03
HDDC3-202ENST00000394272 PRR25Q96S07 402 aa15.25■□□□□ 0.03
HDDC3-202ENST00000394272 BIN3Q9NQY0 253 aa15.25■□□□□ 0.03
HDDC3-202ENST00000394272 SIGLEC8Q9NYZ4 499 aa15.25■□□□□ 0.03
HDDC3-202ENST00000394272 ZNF492Q9P255 531 aa15.25■□□□□ 0.03
HDDC3-202ENST00000394272 ZC2HC1AQ96GY0 325 aa15.25■□□□□ 0.03
HDDC3-202ENST00000394272 AGPAT4-IT1Q9H0P7 198 aa15.25■□□□□ 0.03
HDDC3-202ENST00000394272 SORL1Q92673 2214 aa15.24■□□□□ 0.03
HDDC3-202ENST00000394272 C19orf71A6NCJ1 209 aa15.24■□□□□ 0.03
HDDC3-202ENST00000394272 TFPI2P48307 235 aa15.24■□□□□ 0.03
HDDC3-202ENST00000394272 DEFB114Q30KQ6 69 aa15.24■□□□□ 0.03
HDDC3-202ENST00000394272 SAPCD1Q5SSQ6 148 aa15.24■□□□□ 0.03
HDDC3-202ENST00000394272 NUDT10Q8NFP7 164 aa15.24■□□□□ 0.03
HDDC3-202ENST00000394272 NUDT11Q96G61 164 aa15.24■□□□□ 0.03
HDDC3-202ENST00000394272 C8orf49Q96NF6 230 aa15.24■□□□□ 0.03
HDDC3-202ENST00000394272 IMMP2LQ96T52 175 aa15.24■□□□□ 0.03
HDDC3-202ENST00000394272 DYNLRB2Q8TF09 96 aa15.23■□□□□ 0.03
HDDC3-202ENST00000394272 GPR61Q9BZJ8 451 aa15.23■□□□□ 0.03
HDDC3-202ENST00000394272 PPP1R14DQ9NXH3 145 aa15.23■□□□□ 0.03
HDDC3-202ENST00000394272 PAFAH1B2P68402 229 aa15.23■□□□□ 0.03
HDDC3-202ENST00000394272 TMEM61Q8N0U2 210 aa15.23■□□□□ 0.03
HDDC3-202ENST00000394272 ATRQ13535 2644 aa15.22■□□□□ 0.03
HDDC3-202ENST00000394272 DEFB1P60022 68 aa15.22■□□□□ 0.03
HDDC3-202ENST00000394272 TENM1Q9UKZ4 2725 aa15.22■□□□□ 0.03
HDDC3-202ENST00000394272 TRAV2A0A0B4J234 112 aa15.21■□□□□ 0.03
HDDC3-202ENST00000394272 CXCL1P09341 107 aa15.21■□□□□ 0.03
HDDC3-202ENST00000394272 ZNF705DP0CH99 300 aaPredicted RBP15.21■□□□□ 0.03
HDDC3-202ENST00000394272 ZNF705BP0CI00 300 aaPredicted RBP15.21■□□□□ 0.03
HDDC3-202ENST00000394272 CRIP1P50238 77 aa15.21■□□□□ 0.03
HDDC3-202ENST00000394272 TMEM78Q5T7P6 136 aa15.21■□□□□ 0.03
HDDC3-202ENST00000394272 RBPMS2Q6ZRY4 209 aaKnown RBP15.21■□□□□ 0.03
HDDC3-202ENST00000394272 CITED1Q99966 193 aa15.21■□□□□ 0.03
HDDC3-202ENST00000394272 IL36BQ9NZH7 164 aa15.21■□□□□ 0.03
HDDC3-202ENST00000394272 TGIF2-C20orf24A0A0A6YYL0 155 aa15.2■□□□□ 0.02
HDDC3-202ENST00000394272 ZNF705GA8MUZ8 300 aaPredicted RBP15.2■□□□□ 0.02
HDDC3-202ENST00000394272 NPIPB6E9PJ23 425 aa15.2■□□□□ 0.02
HDDC3-202ENST00000394272 ZNF688P0C7X2 276 aa15.2■□□□□ 0.02
HDDC3-202ENST00000394272 S100PP25815 95 aa15.2■□□□□ 0.02
HDDC3-202ENST00000394272 ZNF138P52744 262 aa15.2■□□□□ 0.02
HDDC3-202ENST00000394272 SNRPD3P62318 126 aaKnown RBP15.2■□□□□ 0.02
HDDC3-202ENST00000394272 CD300EQ496F6 205 aaPredicted RBP15.2■□□□□ 0.02
HDDC3-202ENST00000394272 OR8A1Q8NGG7 326 aa15.2■□□□□ 0.02
HDDC3-202ENST00000394272 NDFIP1Q9BT67 221 aa15.2■□□□□ 0.02
HDDC3-202ENST00000394272 TRBV24-1A0A075B6N3 115 aa15.2■□□□□ 0.02
HDDC3-202ENST00000394272 GATCO43716 136 aaKnown RBP15.2■□□□□ 0.02
HDDC3-202ENST00000394272 OR10J6PQ8NGY7 276 aa15.2■□□□□ 0.02
HDDC3-202ENST00000394272 PYGO2Q9BRQ0 406 aa15.2■□□□□ 0.02
HDDC3-202ENST00000394272 F6UB75 175 aa15.19■□□□□ 0.02
HDDC3-202ENST00000394272 KCNIP4Q6PIL6 250 aa15.19■□□□□ 0.02
HDDC3-202ENST00000394272 LINC00477Q96M19 166 aa15.19■□□□□ 0.02
HDDC3-202ENST00000394272 CT45A10P0DMU9 189 aa15.18■□□□□ 0.02
HDDC3-202ENST00000394272 FAM3BP58499 235 aaPredicted RBP15.18■□□□□ 0.02
HDDC3-202ENST00000394272 PSMG4Q5JS54 123 aa15.18■□□□□ 0.02
HDDC3-202ENST00000394272 LENEPQ9Y5L5 61 aa15.18■□□□□ 0.02
HDDC3-202ENST00000394272 TRAV25A0A0B4J276 109 aa15.18■□□□□ 0.02
HDDC3-202ENST00000394272 CA1P00915 261 aaPredicted RBP15.18■□□□□ 0.02
HDDC3-202ENST00000394272 P01737 135 aa15.18■□□□□ 0.02
HDDC3-202ENST00000394272 KRTAP24-1Q3LI83 254 aa15.18■□□□□ 0.02
HDDC3-202ENST00000394272 DAZAP1Q96EP5 407 aaKnown RBP15.18■□□□□ 0.02
HDDC3-202ENST00000394272 RAB5AP20339 215 aa15.17■□□□□ 0.02
HDDC3-202ENST00000394272 HIST1H1AQ02539 215 aaPredicted RBP15.17■□□□□ 0.02
HDDC3-202ENST00000394272 SMUG1Q53HV7 270 aa15.17■□□□□ 0.02
HDDC3-202ENST00000394272 CT83Q5H943 113 aa15.17■□□□□ 0.02
HDDC3-202ENST00000394272 RPP21Q9H633 154 aaKnown RBP15.17■□□□□ 0.02
HDDC3-202ENST00000394272 A0A1W2PPQ1 181 aa15.16■□□□□ 0.02
HDDC3-202ENST00000394272 ZNF80P51504 273 aaPredicted RBP15.16■□□□□ 0.02
HDDC3-202ENST00000394272 LINC00482Q8N8I6 264 aa15.16■□□□□ 0.02
HDDC3-202ENST00000394272 SPAG8Q99932 426 aaPredicted RBP15.16■□□□□ 0.02
HDDC3-202ENST00000394272 SMIM27A0A1W2PRY6 76 aa15.16■□□□□ 0.02
HDDC3-202ENST00000394272 PF4P02776 101 aa15.16■□□□□ 0.02
HDDC3-202ENST00000394272 FAM162BQ5T6X4 162 aa15.16■□□□□ 0.02
HDDC3-202ENST00000394272 GDF5OSQ5U4N7 250 aa15.16■□□□□ 0.02
HDDC3-202ENST00000394272 OR4B1Q8NGF8 309 aa15.16■□□□□ 0.02
HDDC3-202ENST00000394272 FAM210BQ96KR6 192 aa15.16■□□□□ 0.02
HDDC3-202ENST00000394272 FAM19A4Q96LR4 140 aa15.16■□□□□ 0.02
HDDC3-202ENST00000394272 AGRNO00468 2067 aa15.15■□□□□ 0.02
HDDC3-202ENST00000394272 IZUMO1RA6ND01 250 aa15.15■□□□□ 0.02
HDDC3-202ENST00000394272 PRIMA1Q86XR5 153 aa15.15■□□□□ 0.02
HDDC3-202ENST00000394272 ZNF256Q9Y2P7 627 aaPredicted RBP15.15■□□□□ 0.02
HDDC3-202ENST00000394272 SH2D1AO60880 128 aa15.14■□□□□ 0.01
HDDC3-202ENST00000394272 TSKUQ8WUA8 353 aa15.14■□□□□ 0.01
HDDC3-202ENST00000394272 TRAV9-1A0A075B6T8 112 aa15.14■□□□□ 0.01
HDDC3-202ENST00000394272 A0A0J9YX75 114 aa15.14■□□□□ 0.01
HDDC3-202ENST00000394272 SAP30O75446 220 aa15.14■□□□□ 0.01
HDDC3-202ENST00000394272 TRBV7-9A0A0J9YWB2 115 aa15.13■□□□□ 0.01
HDDC3-202ENST00000394272 OR4C46A6NHA9 309 aa15.13■□□□□ 0.01
HDDC3-202ENST00000394272 A8MWL6 223 aa15.12■□□□□ 0.01
HDDC3-202ENST00000394272 IGLV1-51P01701 117 aa15.12■□□□□ 0.01
HDDC3-202ENST00000394272 FOXI2Q6ZQN5 318 aa15.12■□□□□ 0.01
HDDC3-202ENST00000394272 ZFAND2AQ8N6M9 145 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms