RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 TEN1Q86WV5 123 aa10.96□□□□□ -0.66
USP49-203ENST00000394253 R3HDMLQ9H3Y0 253 aa10.96□□□□□ -0.66
USP49-203ENST00000394253 RPL35AP18077 110 aaKnown RBP10.95□□□□□ -0.66
USP49-203ENST00000394253 MINOS1Q5TGZ0 78 aa10.95□□□□□ -0.66
USP49-203ENST00000394253 Q6ZVH6 145 aa10.95□□□□□ -0.66
USP49-203ENST00000394253 MINOS1-NBL1R4GNA1 71 aa10.95□□□□□ -0.66
USP49-203ENST00000394253 WFDC12Q8WWY7 111 aa10.95□□□□□ -0.66
USP49-203ENST00000394253 RNF166Q96A37 237 aaPredicted RBP10.95□□□□□ -0.66
USP49-203ENST00000394253 METRNQ9UJH8 293 aa10.95□□□□□ -0.66
USP49-203ENST00000394253 H0YGX0 51 aa10.95□□□□□ -0.66
USP49-203ENST00000394253 IGHV3-53P01767 116 aa10.95□□□□□ -0.66
USP49-203ENST00000394253 PFN1P07737 140 aaKnown RBP10.95□□□□□ -0.66
USP49-203ENST00000394253 HERV-K104P63124 156 aa10.95□□□□□ -0.66
USP49-203ENST00000394253 ZNF329Q86UD4 541 aa10.95□□□□□ -0.66
USP49-203ENST00000394253 Q86TA4 180 aa10.95□□□□□ -0.66
USP49-203ENST00000394253 OOSP1A8MZH6 123 aa10.95□□□□□ -0.66
USP49-203ENST00000394253 LINC01620Q4KN68 170 aa10.95□□□□□ -0.66
USP49-203ENST00000394253 SMRP1Q8NCR6 262 aa10.95□□□□□ -0.66
USP49-203ENST00000394253 Q8TAT8 98 aa10.95□□□□□ -0.66
USP49-203ENST00000394253 LOC101059948A0A1B0GTJ6 334 aa10.95□□□□□ -0.66
USP49-203ENST00000394253 COX6A1P12074 109 aa10.95□□□□□ -0.66
USP49-203ENST00000394253 RPP25LQ8N5L8 163 aaKnown RBP10.95□□□□□ -0.66
USP49-203ENST00000394253 LINC00527Q9UJ94 153 aa10.95□□□□□ -0.66
USP49-203ENST00000394253 IGKV1-8A0A0C4DH67 115 aa10.94□□□□□ -0.66
USP49-203ENST00000394253 ACACBO00763 2458 aa10.94□□□□□ -0.66
USP49-203ENST00000394253 NRXN2Q9P2S2 1712 aa10.94□□□□□ -0.66
USP49-203ENST00000394253 PRB1P04280 392 aa10.94□□□□□ -0.66
USP49-203ENST00000394253 NSUN5P1Q3KNT7 163 aa10.94□□□□□ -0.66
USP49-203ENST00000394253 PLA2G2FQ9BZM2 168 aa10.94□□□□□ -0.66
USP49-203ENST00000394253 PRB2P02812 416 aaPredicted RBP10.94□□□□□ -0.66
USP49-203ENST00000394253 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.94□□□□□ -0.66
USP49-203ENST00000394253 M0R1W7 72 aa10.94□□□□□ -0.66
USP49-203ENST00000394253 BTCP35070 178 aa10.94□□□□□ -0.66
USP49-203ENST00000394253 DAD1P61803 113 aa10.94□□□□□ -0.66
USP49-203ENST00000394253 COL24A1Q17RW2 1714 aa10.94□□□□□ -0.66
USP49-203ENST00000394253 CCL3L1P16619 93 aa10.94□□□□□ -0.66
USP49-203ENST00000394253 RNF114Q9Y508 228 aa10.94□□□□□ -0.66
USP49-203ENST00000394253 RS1O15537 224 aa10.94□□□□□ -0.66
USP49-203ENST00000394253 SIGLEC12Q96PQ1 595 aa10.94□□□□□ -0.66
USP49-203ENST00000394253 WFDC1Q9HC57 220 aa10.94□□□□□ -0.66
USP49-203ENST00000394253 IGKV1D-13A0A0B4J2D9 117 aa10.93□□□□□ -0.66
USP49-203ENST00000394253 IGKV1-13P0DP09 117 aa10.93□□□□□ -0.66
USP49-203ENST00000394253 PDE6GP18545 87 aa10.93□□□□□ -0.66
USP49-203ENST00000394253 FLG2Q5D862 2391 aaPredicted RBP10.93□□□□□ -0.66
USP49-203ENST00000394253 PSG7Q13046 419 aa10.93□□□□□ -0.66
USP49-203ENST00000394253 DEFB125Q8N687 156 aa10.93□□□□□ -0.66
USP49-203ENST00000394253 NDUFB8O95169 186 aa10.93□□□□□ -0.66
USP49-203ENST00000394253 C12orf74Q32Q52 190 aa10.93□□□□□ -0.66
USP49-203ENST00000394253 CDCP2Q5VXM1 449 aa10.93□□□□□ -0.66
USP49-203ENST00000394253 SIGLEC8Q9NYZ4 499 aa10.93□□□□□ -0.66
USP49-203ENST00000394253 ANKHD1Q8IWZ3 2542 aaKnown RBP10.93□□□□□ -0.66
USP49-203ENST00000394253 DEFB130BP0DP73 79 aa10.93□□□□□ -0.66
USP49-203ENST00000394253 DEFB130AP0DP74 79 aa10.93□□□□□ -0.66
USP49-203ENST00000394253 ZFYVE26Q68DK2 2539 aa10.93□□□□□ -0.66
USP49-203ENST00000394253 C9JQL5 133 aa10.93□□□□□ -0.66
USP49-203ENST00000394253 JMJD7-PLA2G4BH0Y9G9 81 aa10.92□□□□□ -0.66
USP49-203ENST00000394253 CELA2AP08217 269 aa10.92□□□□□ -0.66
USP49-203ENST00000394253 VWC2Q2TAL6 325 aa10.92□□□□□ -0.66
USP49-203ENST00000394253 NDUFC2-KCTD14E9PQ53 114 aa10.92□□□□□ -0.66
USP49-203ENST00000394253 NTN3O00634 580 aaPredicted RBP10.92□□□□□ -0.66
USP49-203ENST00000394253 DSCR9P59020 149 aa10.92□□□□□ -0.66
USP49-203ENST00000394253 WFDC11Q8NEX6 87 aa10.92□□□□□ -0.66
USP49-203ENST00000394253 ZNF492Q9P255 531 aa10.92□□□□□ -0.66
USP49-203ENST00000394253 NTN5Q8WTR8 489 aaPredicted RBP10.92□□□□□ -0.66
USP49-203ENST00000394253 FOXI2Q6ZQN5 318 aa10.92□□□□□ -0.66
USP49-203ENST00000394253 DEFB105AQ8NG35 78 aa10.92□□□□□ -0.66
USP49-203ENST00000394253 SDHAF1A6NFY7 115 aa10.92□□□□□ -0.66
USP49-203ENST00000394253 F5H768 121 aa10.91□□□□□ -0.66
USP49-203ENST00000394253 MRPL23Q16540 153 aaKnown RBP10.91□□□□□ -0.66
USP49-203ENST00000394253 TMEM14EPQ6UXP3 125 aa10.91□□□□□ -0.66
USP49-203ENST00000394253 IL15RAQ13261 267 aa10.91□□□□□ -0.66
USP49-203ENST00000394253 CTHRC1Q96CG8 243 aa10.91□□□□□ -0.66
USP49-203ENST00000394253 KIR2DL5BA0A0G2JN68 375 aa10.91□□□□□ -0.66
USP49-203ENST00000394253 KIR2DL5BA0A0G2JPC4 375 aa10.91□□□□□ -0.66
USP49-203ENST00000394253 C4orf48Q5BLP8 95 aa10.91□□□□□ -0.66
USP49-203ENST00000394253 KIR2DL5AQ8N109 375 aa10.91□□□□□ -0.66
USP49-203ENST00000394253 ARMS2P0C7Q2 107 aa10.91□□□□□ -0.66
USP49-203ENST00000394253 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.91□□□□□ -0.66
USP49-203ENST00000394253 C19orf48Q6RUI8 117 aa10.91□□□□□ -0.66
USP49-203ENST00000394253 SLC25A29Q8N8R3 303 aa10.91□□□□□ -0.66
USP49-203ENST00000394253 CLPSP04118 112 aa10.91□□□□□ -0.66
USP49-203ENST00000394253 CFC1BP0CG36 223 aa10.91□□□□□ -0.66
USP49-203ENST00000394253 CFC1P0CG37 223 aa10.91□□□□□ -0.66
USP49-203ENST00000394253 OPRPNQ99935 248 aaPredicted RBP10.91□□□□□ -0.66
USP49-203ENST00000394253 C20orf173Q96LM9 149 aa10.91□□□□□ -0.66
USP49-203ENST00000394253 REG4Q9BYZ8 158 aa10.91□□□□□ -0.66
USP49-203ENST00000394253 IGHV2-70DA0A0C4DH43 119 aa10.9□□□□□ -0.66
USP49-203ENST00000394253 APOC4P55056 127 aa10.9□□□□□ -0.66
USP49-203ENST00000394253 CASC2Q6XLA1 102 aa10.9□□□□□ -0.66
USP49-203ENST00000394253 PTPRSQ13332 1948 aa10.9□□□□□ -0.66
USP49-203ENST00000394253 DEFB104AQ8WTQ1 72 aa10.9□□□□□ -0.66
USP49-203ENST00000394253 MRPS18CQ9Y3D5 142 aaKnown RBP10.9□□□□□ -0.66
USP49-203ENST00000394253 TRAV3A0A0B4J244 114 aa10.9□□□□□ -0.66
USP49-203ENST00000394253 UBE2AP49459 152 aa10.9□□□□□ -0.66
USP49-203ENST00000394253 KIAA1671Q9BY89 1806 aa10.9□□□□□ -0.66
USP49-203ENST00000394253 LINC01560Q8TB33 94 aa10.9□□□□□ -0.66
USP49-203ENST00000394253 C20orf78Q9BR46 151 aa10.9□□□□□ -0.66
USP49-203ENST00000394253 LRRK2Q5S007 2527 aa10.9□□□□□ -0.66
USP49-203ENST00000394253 SMIM27A0A1W2PRY6 76 aa10.9□□□□□ -0.67
USP49-203ENST00000394253 H0YIZ8 118 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 164.7 ms