RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 PARLQ9H300 379 aa4.53□□□□□ -1.68
CASC3-202ENST00000394114 THYN1Q9P016 225 aa4.53□□□□□ -1.68
CASC3-202ENST00000394114 HIVEP2P31629 2446 aa4.53□□□□□ -1.68
CASC3-202ENST00000394114 FBN3Q75N90 2809 aa4.53□□□□□ -1.68
CASC3-202ENST00000394114 GGCTO75223 188 aaKnown RBP4.53□□□□□ -1.68
CASC3-202ENST00000394114 TFPI2P48307 235 aa4.53□□□□□ -1.68
CASC3-202ENST00000394114 ADIRFQ15847 76 aa4.53□□□□□ -1.68
CASC3-202ENST00000394114 TVP23CQ96ET8 276 aa4.53□□□□□ -1.68
CASC3-202ENST00000394114 PAXXQ9BUH6 204 aa4.53□□□□□ -1.68
CASC3-202ENST00000394114 MRPL32Q9BYC8 188 aaKnown RBP4.53□□□□□ -1.68
CASC3-202ENST00000394114 GNB4Q9HAV0 340 aa4.53□□□□□ -1.68
CASC3-202ENST00000394114 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.53□□□□□ -1.68
CASC3-202ENST00000394114 PMCHP20382 165 aa4.53□□□□□ -1.68
CASC3-202ENST00000394114 CLEC19AQ6UXS0 136 aa4.53□□□□□ -1.68
CASC3-202ENST00000394114 C19orf24Q9BVV8 132 aa4.53□□□□□ -1.68
CASC3-202ENST00000394114 CST9LQ9H4G1 147 aa4.53□□□□□ -1.68
CASC3-202ENST00000394114 HIGD1AQ9Y241 93 aa4.53□□□□□ -1.68
CASC3-202ENST00000394114 ATRQ13535 2644 aa4.52□□□□□ -1.69
CASC3-202ENST00000394114 GGTLC3B5MD39 225 aa4.52□□□□□ -1.69
CASC3-202ENST00000394114 TMEM250H0YL14 139 aa4.52□□□□□ -1.69
CASC3-202ENST00000394114 K7ERU9 68 aa4.52□□□□□ -1.69
CASC3-202ENST00000394114 IGHV3-11P01762 117 aa4.52□□□□□ -1.69
CASC3-202ENST00000394114 TRGV3P03979 118 aa4.52□□□□□ -1.69
CASC3-202ENST00000394114 CTSGP08311 255 aa4.52□□□□□ -1.69
CASC3-202ENST00000394114 ZNF329Q86UD4 541 aa4.52□□□□□ -1.69
CASC3-202ENST00000394114 ZNF491Q8N8L2 437 aa4.52□□□□□ -1.69
CASC3-202ENST00000394114 SMR3AQ99954 134 aa4.52□□□□□ -1.69
CASC3-202ENST00000394114 SLC25A39Q9BZJ4 359 aaPredicted RBP4.52□□□□□ -1.69
CASC3-202ENST00000394114 TMEM167BQ9NRX6 74 aa4.52□□□□□ -1.69
CASC3-202ENST00000394114 WNK1Q9H4A3 2382 aa4.52□□□□□ -1.69
CASC3-202ENST00000394114 IGHV3OR16-13A0A075B7E8 117 aa4.52□□□□□ -1.69
CASC3-202ENST00000394114 IGHV3-74A0A0B4J1X5 117 aa4.52□□□□□ -1.69
CASC3-202ENST00000394114 GAGE12JA6NER3 117 aa4.52□□□□□ -1.69
CASC3-202ENST00000394114 PPP5D1E7EU14 171 aa4.52□□□□□ -1.69
CASC3-202ENST00000394114 TSPAN13O95857 204 aa4.52□□□□□ -1.69
CASC3-202ENST00000394114 CRYBB3P26998 211 aa4.52□□□□□ -1.69
CASC3-202ENST00000394114 TMEM241Q24JQ0 296 aa4.52□□□□□ -1.69
CASC3-202ENST00000394114 C10orf99Q6UWK7 81 aa4.52□□□□□ -1.69
CASC3-202ENST00000394114 ZNF664Q8N3J9 261 aa4.52□□□□□ -1.69
CASC3-202ENST00000394114 PTH2Q96A98 100 aa4.52□□□□□ -1.69
CASC3-202ENST00000394114 FXYD5Q96DB9 178 aa4.52□□□□□ -1.69
CASC3-202ENST00000394114 KLK15Q9H2R5 256 aa4.52□□□□□ -1.69
CASC3-202ENST00000394114 SDF2L1Q9HCN8 221 aa4.52□□□□□ -1.69
CASC3-202ENST00000394114 TRBV20OR9-2A0A075B6H5 130 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 IGHV3-49A0A0A0MS15 119 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 K7EN84 100 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 ZNF207O43670 478 aaKnown RBP4.51□□□□□ -1.69
CASC3-202ENST00000394114 TOMM40O96008 361 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 FSHBP01225 129 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 IGHG2P01859 326 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 NHLRC4P0CG21 123 aaPredicted RBP4.51□□□□□ -1.69
CASC3-202ENST00000394114 TPPP2P59282 170 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 ZNF343Q6P1L6 599 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 NECAP1Q8NC96 275 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 ZNF502Q8TBZ5 544 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 Q8WTZ3 238 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 HIST1H2BAQ96A08 127 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 LINC00479Q96M42 142 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 OR5B12Q96R08 314 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 NAT8Q9UHE5 227 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 VPREB3Q9UKI3 123 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 PSG8Q9UQ74 426 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.51□□□□□ -1.69
CASC3-202ENST00000394114 NSD1Q96L73 2696 aaPredicted RBP4.51□□□□□ -1.69
CASC3-202ENST00000394114 TRBV9A0A0B4J1U6 114 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 IGHV3-66A0A0C4DH42 116 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 TRBV12-3P01733 135 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 RPL23P62829 140 aaKnown RBP4.51□□□□□ -1.69
CASC3-202ENST00000394114 GNG5P63218 68 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 SMAGPQ0VAQ4 97 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 RHEBQ15382 184 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 PSG3Q16557 428 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 FAM24BQ8N5W8 94 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 C17orf77Q96MU5 243 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 WWC2-AS2Q96NR7 200 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 PPDPFQ9H3Y8 114 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 SMCO4Q9NRQ5 59 aa4.51□□□□□ -1.69
CASC3-202ENST00000394114 TRAV30A0A087WSZ9 112 aa4.5□□□□□ -1.69
CASC3-202ENST00000394114 IFITM10A6NMD0 228 aa4.5□□□□□ -1.69
CASC3-202ENST00000394114 RS1O15537 224 aa4.5□□□□□ -1.69
CASC3-202ENST00000394114 SCGB1A1P11684 91 aa4.5□□□□□ -1.69
CASC3-202ENST00000394114 FOLR2P14207 255 aa4.5□□□□□ -1.69
CASC3-202ENST00000394114 SRP14P37108 136 aaKnown RBP4.5□□□□□ -1.69
CASC3-202ENST00000394114 PLP1P60201 277 aa4.5□□□□□ -1.69
CASC3-202ENST00000394114 ATP5G2Q06055 141 aa4.5□□□□□ -1.69
CASC3-202ENST00000394114 SIGLECL1Q8N7X8 197 aa4.5□□□□□ -1.69
CASC3-202ENST00000394114 VN1R17PQ8TDU5 208 aa4.5□□□□□ -1.69
CASC3-202ENST00000394114 MRPL27Q9P0M9 148 aaKnown RBP4.5□□□□□ -1.69
CASC3-202ENST00000394114 ANK3Q12955 4377 aaKnown RBP4.5□□□□□ -1.69
CASC3-202ENST00000394114 WI2-2373I1.2A0A1W2PRP0 233 aa4.5□□□□□ -1.69
CASC3-202ENST00000394114 IGF1P05019 195 aa4.5□□□□□ -1.69
CASC3-202ENST00000394114 YPEL3P61236 119 aaPredicted RBP4.5□□□□□ -1.69
CASC3-202ENST00000394114 KLF5Q13887 457 aaPredicted RBP4.5□□□□□ -1.69
CASC3-202ENST00000394114 TOMM20LQ6UXN7 152 aa4.5□□□□□ -1.69
CASC3-202ENST00000394114 Q6YL49 198 aa4.5□□□□□ -1.69
CASC3-202ENST00000394114 OR9G4Q8NGQ1 327 aa4.5□□□□□ -1.69
CASC3-202ENST00000394114 EEF1AKMT3Q96AZ1 226 aa4.5□□□□□ -1.69
CASC3-202ENST00000394114 SHANK2-AS3Q9BTD1 123 aa4.5□□□□□ -1.69
CASC3-202ENST00000394114 MAP1LC3CQ9BXW4 147 aa4.5□□□□□ -1.69
CASC3-202ENST00000394114 SELENOKQ9Y6D0 94 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms