RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 MEF2BQ02080 365 aaPredicted RBP8.17□□□□□ -1.1
PDGFD-202ENST00000393158 C11orf52Q96A22 123 aa8.17□□□□□ -1.1
PDGFD-202ENST00000393158 SFRP2Q96HF1 295 aa8.17□□□□□ -1.1
PDGFD-202ENST00000393158 DUX3Q96PT4 197 aa8.17□□□□□ -1.1
PDGFD-202ENST00000393158 CITED2Q99967 270 aaPredicted RBP8.17□□□□□ -1.1
PDGFD-202ENST00000393158 HIGD1AQ9Y241 93 aa8.17□□□□□ -1.1
PDGFD-202ENST00000393158 ARL2-SNX15V9GYD0 113 aa8.17□□□□□ -1.1
PDGFD-202ENST00000393158 COX7A2P2O60397 106 aa8.17□□□□□ -1.1
PDGFD-202ENST00000393158 IGLV2-8P01709 118 aa8.17□□□□□ -1.1
PDGFD-202ENST00000393158 TM4SF20Q53R12 229 aa8.17□□□□□ -1.1
PDGFD-202ENST00000393158 GBGT1Q8N5D6 347 aa8.17□□□□□ -1.1
PDGFD-202ENST00000393158 OR1L4Q8NGR5 311 aa8.17□□□□□ -1.1
PDGFD-202ENST00000393158 TRBV19A0A075B6N1 114 aa8.16□□□□□ -1.1
PDGFD-202ENST00000393158 J3KRW8 73 aa8.16□□□□□ -1.1
PDGFD-202ENST00000393158 OR7C2O60412 319 aa8.16□□□□□ -1.1
PDGFD-202ENST00000393158 A0A087X0K7 114 aa8.16□□□□□ -1.1
PDGFD-202ENST00000393158 KIAA1644Q3SXP7 199 aa8.16□□□□□ -1.1
PDGFD-202ENST00000393158 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.16□□□□□ -1.1
PDGFD-202ENST00000393158 PQLC2Q6ZP29 291 aa8.16□□□□□ -1.1
PDGFD-202ENST00000393158 WNK1Q9H4A3 2382 aa8.16□□□□□ -1.1
PDGFD-202ENST00000393158 H3BTX0 84 aa8.16□□□□□ -1.1
PDGFD-202ENST00000393158 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.16□□□□□ -1.1
PDGFD-202ENST00000393158 SAMD10Q9BYL1 202 aa8.16□□□□□ -1.1
PDGFD-202ENST00000393158 VAX2Q9UIW0 290 aa8.16□□□□□ -1.1
PDGFD-202ENST00000393158 A0A0G2JLM5 398 aa8.15□□□□□ -1.1
PDGFD-202ENST00000393158 LGALS9O00182 355 aa8.15□□□□□ -1.1
PDGFD-202ENST00000393158 PRB4P10163 310 aaPredicted RBP8.15□□□□□ -1.1
PDGFD-202ENST00000393158 HOXD3P31249 432 aaPredicted RBP8.15□□□□□ -1.1
PDGFD-202ENST00000393158 SLURP1P55000 103 aa8.15□□□□□ -1.1
PDGFD-202ENST00000393158 ELOBQ15370 118 aa8.15□□□□□ -1.1
PDGFD-202ENST00000393158 ZNF418Q8TF45 676 aaPredicted RBP8.15□□□□□ -1.1
PDGFD-202ENST00000393158 SMIM12Q96EX1 92 aa8.15□□□□□ -1.1
PDGFD-202ENST00000393158 IGF2BP2-AS1Q96M15 143 aa8.15□□□□□ -1.1
PDGFD-202ENST00000393158 TIMM8BQ9Y5J9 83 aaPredicted RBP8.15□□□□□ -1.1
PDGFD-202ENST00000393158 COL6A5A8TX70 2615 aa8.15□□□□□ -1.1
PDGFD-202ENST00000393158 AGRNO00468 2067 aa8.15□□□□□ -1.1
PDGFD-202ENST00000393158 SCO2A0A1W2PP80 73 aa8.15□□□□□ -1.1
PDGFD-202ENST00000393158 HBE1P02100 147 aa8.15□□□□□ -1.1
PDGFD-202ENST00000393158 C8orf86Q6ZUL3 223 aa8.15□□□□□ -1.11
PDGFD-202ENST00000393158 LINC00479Q96M42 142 aa8.15□□□□□ -1.11
PDGFD-202ENST00000393158 SMDT1Q9H4I9 107 aa8.15□□□□□ -1.11
PDGFD-202ENST00000393158 COL7A1Q02388 2944 aa8.15□□□□□ -1.11
PDGFD-202ENST00000393158 IGHV3-66A0A0C4DH42 116 aa8.14□□□□□ -1.11
PDGFD-202ENST00000393158 A0A1W2PPV4 95 aa8.14□□□□□ -1.11
PDGFD-202ENST00000393158 CHEK1O14757 476 aa8.14□□□□□ -1.11
PDGFD-202ENST00000393158 HLA-DMBP28068 263 aa8.14□□□□□ -1.11
PDGFD-202ENST00000393158 C20orf173Q96LM9 149 aa8.14□□□□□ -1.11
PDGFD-202ENST00000393158 PAXXQ9BUH6 204 aa8.14□□□□□ -1.11
PDGFD-202ENST00000393158 MANBALQ9NQG1 85 aa8.14□□□□□ -1.11
PDGFD-202ENST00000393158 A0A1W2PRE2 83 aa8.14□□□□□ -1.11
PDGFD-202ENST00000393158 ID1P41134 155 aa8.14□□□□□ -1.11
PDGFD-202ENST00000393158 YPEL4Q96NS1 127 aa8.14□□□□□ -1.11
PDGFD-202ENST00000393158 PRKDCP78527 4128 aaKnown RBP8.14□□□□□ -1.11
PDGFD-202ENST00000393158 IGHV3-49A0A0A0MS15 119 aa8.14□□□□□ -1.11
PDGFD-202ENST00000393158 GRIFINA4D1Z8 144 aa8.14□□□□□ -1.11
PDGFD-202ENST00000393158 K7EN84 100 aa8.14□□□□□ -1.11
PDGFD-202ENST00000393158 CKS1BP61024 79 aa8.14□□□□□ -1.11
PDGFD-202ENST00000393158 KRTAP24-1Q3LI83 254 aa8.14□□□□□ -1.11
PDGFD-202ENST00000393158 AMMECR1LQ6DCA0 310 aa8.14□□□□□ -1.11
PDGFD-202ENST00000393158 EXOC3-AS1Q8N2X6 119 aa8.14□□□□□ -1.11
PDGFD-202ENST00000393158 DCANP1Q8TF63 244 aa8.14□□□□□ -1.11
PDGFD-202ENST00000393158 NIPSNAP3BQ9BS92 247 aa8.14□□□□□ -1.11
PDGFD-202ENST00000393158 SLC35B3Q9H1N7 401 aa8.14□□□□□ -1.11
PDGFD-202ENST00000393158 RNF114Q9Y508 228 aa8.14□□□□□ -1.11
PDGFD-202ENST00000393158 IGHV3OR16-13A0A075B7E8 117 aa8.13□□□□□ -1.11
PDGFD-202ENST00000393158 IGHV3-74A0A0B4J1X5 117 aa8.13□□□□□ -1.11
PDGFD-202ENST00000393158 C11orf94C9JXX5 98 aa8.13□□□□□ -1.11
PDGFD-202ENST00000393158 K7EMT4 169 aa8.13□□□□□ -1.11
PDGFD-202ENST00000393158 DLX4Q92988 240 aaPredicted RBP8.13□□□□□ -1.11
PDGFD-202ENST00000393158 C11orf44Q8N8P7 122 aa8.13□□□□□ -1.11
PDGFD-202ENST00000393158 KLF12Q9Y4X4 402 aa8.13□□□□□ -1.11
PDGFD-202ENST00000393158 IGHV7-4-1A0A0J9YVY3 117 aa8.13□□□□□ -1.11
PDGFD-202ENST00000393158 NBEAP1P0C6P0 100 aa8.13□□□□□ -1.11
PDGFD-202ENST00000393158 ANXA2RQ3ZCQ2 193 aa8.13□□□□□ -1.11
PDGFD-202ENST00000393158 TMEM183AQ8IXX5 376 aa8.13□□□□□ -1.11
PDGFD-202ENST00000393158 TVP23CQ96ET8 276 aa8.13□□□□□ -1.11
PDGFD-202ENST00000393158 AURKAIP1Q9NWT8 199 aaPredicted RBP8.13□□□□□ -1.11
PDGFD-202ENST00000393158 RABAC1Q9UI14 185 aa8.13□□□□□ -1.11
PDGFD-202ENST00000393158 PGPEP1LA6NFU8 196 aa8.12□□□□□ -1.11
PDGFD-202ENST00000393158 SLC35B1P78383 322 aa8.12□□□□□ -1.11
PDGFD-202ENST00000393158 ADIRFQ15847 76 aa8.12□□□□□ -1.11
PDGFD-202ENST00000393158 IGFL4Q6B9Z1 124 aa8.12□□□□□ -1.11
PDGFD-202ENST00000393158 OR11H1Q8NG94 326 aa8.12□□□□□ -1.11
PDGFD-202ENST00000393158 HUWE1Q7Z6Z7 4374 aaKnown RBP8.12□□□□□ -1.11
PDGFD-202ENST00000393158 CSN3P07498 182 aa8.12□□□□□ -1.11
PDGFD-202ENST00000393158 GNG5P63218 68 aa8.12□□□□□ -1.11
PDGFD-202ENST00000393158 UBE2L3P68036 154 aaKnown RBP8.12□□□□□ -1.11
PDGFD-202ENST00000393158 FOXL1Q12952 345 aa8.12□□□□□ -1.11
PDGFD-202ENST00000393158 C1orf194Q5T5A4 169 aa8.12□□□□□ -1.11
PDGFD-202ENST00000393158 SMIM20Q8N5G0 67 aa8.12□□□□□ -1.11
PDGFD-202ENST00000393158 PARLQ9H300 379 aa8.12□□□□□ -1.11
PDGFD-202ENST00000393158 ZNF331Q9NQX6 463 aaPredicted RBP8.12□□□□□ -1.11
PDGFD-202ENST00000393158 TMEM250H0YL14 139 aa8.12□□□□□ -1.11
PDGFD-202ENST00000393158 GCGP01275 180 aa8.12□□□□□ -1.11
PDGFD-202ENST00000393158 HIST1H1EP10412 219 aaKnown RBP8.12□□□□□ -1.11
PDGFD-202ENST00000393158 GTF2H5Q6ZYL4 71 aa8.12□□□□□ -1.11
PDGFD-202ENST00000393158 NIT1Q86X76 327 aa8.12□□□□□ -1.11
PDGFD-202ENST00000393158 LAMTOR2Q9Y2Q5 125 aa8.12□□□□□ -1.11
PDGFD-202ENST00000393158 GAGE12BA1L429 117 aa8.11□□□□□ -1.11
PDGFD-202ENST00000393158 K7EQM0 130 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms