RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 ARL14EPLP0DKL9 152 aa4.94□□□□□ -1.62
UBBP1-201ENST00000392399 GCHFRP30047 84 aa4.94□□□□□ -1.62
UBBP1-201ENST00000392399 TSPOP30536 169 aa4.94□□□□□ -1.62
UBBP1-201ENST00000392399 PPT1P50897 306 aa4.94□□□□□ -1.62
UBBP1-201ENST00000392399 DEFB1P60022 68 aa4.94□□□□□ -1.62
UBBP1-201ENST00000392399 HIST1H1AQ02539 215 aaPredicted RBP4.94□□□□□ -1.62
UBBP1-201ENST00000392399 DEFB135Q30KP9 77 aa4.94□□□□□ -1.62
UBBP1-201ENST00000392399 AMTNQ6UX39 209 aa4.94□□□□□ -1.62
UBBP1-201ENST00000392399 CSNK1G2-AS1Q8NCQ2 148 aa4.94□□□□□ -1.62
UBBP1-201ENST00000392399 ODF3Q96PU9 254 aa4.94□□□□□ -1.62
UBBP1-201ENST00000392399 RARRES2Q99969 163 aa4.94□□□□□ -1.62
UBBP1-201ENST00000392399 NKX6-2Q9C056 277 aaPredicted RBP4.94□□□□□ -1.62
UBBP1-201ENST00000392399 Q9H3A6 140 aa4.94□□□□□ -1.62
UBBP1-201ENST00000392399 OTORQ9NRC9 128 aa4.94□□□□□ -1.62
UBBP1-201ENST00000392399 ARL2-SNX15V9GYD0 113 aa4.94□□□□□ -1.62
UBBP1-201ENST00000392399 TRBV7-9A0A0J9YWB2 115 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 SERTM2A0A1B0GWG4 89 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 A0A1W2PRE2 83 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 PGPA6NDG6 321 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 SMIM9A6NGZ8 99 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 PRAC2D3DTV9 90 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 NPIPB6E9PJ23 425 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 M0R3E3 92 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 IFNA1P01562 189 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 MIFP14174 115 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 CDKN1BP46527 198 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 PEA15Q15121 130 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 ZNF726P1Q15940 193 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 TOR2AQ5JU69 321 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 TMEM78Q5T7P6 136 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 C9orf47Q6ZRZ4 202 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 EXOC3-AS1Q8N2X6 119 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 OR11H2Q8NH07 326 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 CMTM2Q8TAZ6 248 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 PCNPQ8WW12 178 aaKnown RBP4.93□□□□□ -1.62
UBBP1-201ENST00000392399 IGF2BP2-AS1Q96M15 143 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 WWC2-AS2Q96NR7 200 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 NEU1Q99519 415 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 C20orf144Q9BQM9 153 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 TXNDC17Q9BRA2 123 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 SLC35B3Q9H1N7 401 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 XCL2Q9UBD3 114 aa4.93□□□□□ -1.62
UBBP1-201ENST00000392399 TMEM218A2RU14 115 aa4.92□□□□□ -1.62
UBBP1-201ENST00000392399 MAP1LC3B2A6NCE7 125 aa4.92□□□□□ -1.62
UBBP1-201ENST00000392399 FBLL1A6NHQ2 334 aaKnown RBP4.92□□□□□ -1.62
UBBP1-201ENST00000392399 K7EQM0 130 aa4.92□□□□□ -1.62
UBBP1-201ENST00000392399 EIF3GO75821 320 aaKnown RBP eCLIP4.92□□□□□ -1.62
UBBP1-201ENST00000392399 ZNF705DP0CH99 300 aaPredicted RBP4.92□□□□□ -1.62
UBBP1-201ENST00000392399 ZNF705BP0CI00 300 aaPredicted RBP4.92□□□□□ -1.62
UBBP1-201ENST00000392399 LEPP41159 167 aa4.92□□□□□ -1.62
UBBP1-201ENST00000392399 SUMO1P63165 101 aaKnown RBP4.92□□□□□ -1.62
UBBP1-201ENST00000392399 ZNF506Q5JVG8 444 aa4.92□□□□□ -1.62
UBBP1-201ENST00000392399 C10orf91Q5T1B1 145 aa4.92□□□□□ -1.62
UBBP1-201ENST00000392399 ZNF705AQ6ZN79 300 aaPredicted RBP4.92□□□□□ -1.62
UBBP1-201ENST00000392399 SSX7Q7RTT5 188 aa4.92□□□□□ -1.62
UBBP1-201ENST00000392399 IQCF2Q8IXL9 164 aa4.92□□□□□ -1.62
UBBP1-201ENST00000392399 TMEM256Q8N2U0 113 aa4.92□□□□□ -1.62
UBBP1-201ENST00000392399 C5orf17Q8NAS9 161 aa4.92□□□□□ -1.62
UBBP1-201ENST00000392399 IL17DQ8TAD2 202 aa4.92□□□□□ -1.62
UBBP1-201ENST00000392399 SFT2D1Q8WV19 159 aa4.92□□□□□ -1.62
UBBP1-201ENST00000392399 MAP1LC3BQ9GZQ8 125 aa4.92□□□□□ -1.62
UBBP1-201ENST00000392399 AGPAT4-IT1Q9H0P7 198 aa4.92□□□□□ -1.62
UBBP1-201ENST00000392399 RETNQ9HD89 108 aa4.92□□□□□ -1.62
UBBP1-201ENST00000392399 MANBALQ9NQG1 85 aa4.92□□□□□ -1.62
UBBP1-201ENST00000392399 CARHSP1Q9Y2V2 147 aaKnown RBP4.92□□□□□ -1.62
UBBP1-201ENST00000392399 GOLT1BQ9Y3E0 138 aa4.92□□□□□ -1.62
UBBP1-201ENST00000392399 LENEPQ9Y5L5 61 aa4.92□□□□□ -1.62
UBBP1-201ENST00000392399 RBFOX3A6NFN3 312 aa4.91□□□□□ -1.62
UBBP1-201ENST00000392399 DIRC3C9JPN6 131 aa4.91□□□□□ -1.62
UBBP1-201ENST00000392399 M0R2Z0 102 aa4.91□□□□□ -1.62
UBBP1-201ENST00000392399 CRXO43186 299 aaPredicted RBP4.91□□□□□ -1.62
UBBP1-201ENST00000392399 INSP01308 110 aa4.91□□□□□ -1.62
UBBP1-201ENST00000392399 CT45A10P0DMU9 189 aa4.91□□□□□ -1.62
UBBP1-201ENST00000392399 BCL2P10415 239 aa4.91□□□□□ -1.62
UBBP1-201ENST00000392399 CRISP2P16562 243 aa4.91□□□□□ -1.62
UBBP1-201ENST00000392399 FHITP49789 147 aa4.91□□□□□ -1.62
UBBP1-201ENST00000392399 ZNF138P52744 262 aa4.91□□□□□ -1.62
UBBP1-201ENST00000392399 SPINK13Q1W4C9 94 aa4.91□□□□□ -1.62
UBBP1-201ENST00000392399 TCEAL7Q9BRU2 100 aa4.91□□□□□ -1.62
UBBP1-201ENST00000392399 TMEM208Q9BTX3 173 aa4.91□□□□□ -1.62
UBBP1-201ENST00000392399 SEC11CQ9BY50 192 aa4.91□□□□□ -1.62
UBBP1-201ENST00000392399 C11orf68Q9H3H3 251 aaKnown RBP4.91□□□□□ -1.62
UBBP1-201ENST00000392399 EDA2RQ9HAV5 297 aa4.91□□□□□ -1.62
UBBP1-201ENST00000392399 ZNF492Q9P255 531 aa4.91□□□□□ -1.62
UBBP1-201ENST00000392399 EPDR1Q9UM22 224 aa4.91□□□□□ -1.62
UBBP1-201ENST00000392399 IGKV2-40A0A087WW87 121 aaPredicted RBP4.9□□□□□ -1.63
UBBP1-201ENST00000392399 LOC102723971A0A1B0GUV8 181 aa4.9□□□□□ -1.63
UBBP1-201ENST00000392399 TMEM189A5PLL7 270 aa4.9□□□□□ -1.63
UBBP1-201ENST00000392399 FAM74A7A6NL05 159 aa4.9□□□□□ -1.63
UBBP1-201ENST00000392399 F6UZH7 168 aa4.9□□□□□ -1.63
UBBP1-201ENST00000392399 H7BYZ3 331 aa4.9□□□□□ -1.63
UBBP1-201ENST00000392399 IGKV2D-40P01614 121 aaPredicted RBP4.9□□□□□ -1.63
UBBP1-201ENST00000392399 FGF8P55075 233 aaPredicted RBP4.9□□□□□ -1.63
UBBP1-201ENST00000392399 FXYD7P58549 80 aa4.9□□□□□ -1.63
UBBP1-201ENST00000392399 ERCC8Q13216 396 aa4.9□□□□□ -1.63
UBBP1-201ENST00000392399 C1orf158Q8N1D5 194 aa4.9□□□□□ -1.63
UBBP1-201ENST00000392399 HIST1H2BAQ96A08 127 aa4.9□□□□□ -1.63
UBBP1-201ENST00000392399 FAM19A4Q96LR4 140 aa4.9□□□□□ -1.63
UBBP1-201ENST00000392399 VGLL1Q99990 258 aa4.9□□□□□ -1.63
UBBP1-201ENST00000392399 SSBP4Q9BWG4 385 aaPredicted RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms