RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 ZFP36P26651 326 aaKnown RBP8.12□□□□□ -1.11
PKP4-201ENST00000389757 C9orf66Q5T8R8 295 aa8.12□□□□□ -1.11
PKP4-201ENST00000389757 ATP6V0BQ99437 205 aa8.12□□□□□ -1.11
PKP4-201ENST00000389757 TRAV12-2A0A075B6T6 113 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 GAGE12BA1L429 117 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 SLC25A20O43772 301 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 GAGE7O76087 117 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 GAGE12FP0CL80 117 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 GAGE12GP0CL81 117 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 GAGE12IP0CL82 117 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 PLNP26678 52 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 LINC00158P58513 81 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 HAPLN4Q86UW8 402 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 ZNF491Q8N8L2 437 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 A8MWV9 139 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 GHRHP01286 108 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 AMN1Q8IY45 258 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 C8orf49Q96NF6 230 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 IGHV3-64A0A075B6Q5 118 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 HIST1H2BKO60814 126 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 HIST1H2BJP06899 126 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 HIST1H2BOP23527 126 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 HIST1H2BBP33778 126 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 HIST1H2BDP58876 126 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 HIST1H2BCP62807 126 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 HIST2H2BEQ16778 126 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.11□□□□□ -1.11
PKP4-201ENST00000389757 HIST1H2BHQ93079 126 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 HIST1H2BNQ99877 126 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 HIST1H2BMQ99879 126 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 CBY1Q9Y3M2 126 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 GAGE12JA6NER3 117 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 C19orf84I3L1E1 186 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 GAGE1Q13065 139 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 GAGE4Q13068 117 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 GAGE5Q13069 117 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 GAGE13Q4V321 117 aa8.11□□□□□ -1.11
PKP4-201ENST00000389757 C11orf68Q9H3H3 251 aaKnown RBP8.11□□□□□ -1.11
PKP4-201ENST00000389757 PRR25Q96S07 402 aa8.1□□□□□ -1.11
PKP4-201ENST00000389757 DMRT1Q9Y5R6 373 aa8.1□□□□□ -1.11
PKP4-201ENST00000389757 A0A0U1RRA0 63 aa8.1□□□□□ -1.11
PKP4-201ENST00000389757 ZNF815PA8K554 130 aa8.1□□□□□ -1.11
PKP4-201ENST00000389757 CXCL1P09341 107 aa8.1□□□□□ -1.11
PKP4-201ENST00000389757 CTAG1AP78358 180 aa8.1□□□□□ -1.11
PKP4-201ENST00000389757 SS18Q15532 418 aa8.1□□□□□ -1.11
PKP4-201ENST00000389757 LRRC75A-AS1Q8N1F1 130 aa8.1□□□□□ -1.11
PKP4-201ENST00000389757 NCOR2Q9Y618 2525 aa8.1□□□□□ -1.11
PKP4-201ENST00000389757 ZNF843Q8N446 348 aa8.1□□□□□ -1.11
PKP4-201ENST00000389757 OR2K2Q8NGT1 345 aa8.1□□□□□ -1.11
PKP4-201ENST00000389757 RASL10AQ92737 203 aa8.1□□□□□ -1.11
PKP4-201ENST00000389757 LAMTOR2Q9Y2Q5 125 aa8.1□□□□□ -1.11
PKP4-201ENST00000389757 HIVEP2P31629 2446 aa8.1□□□□□ -1.11
PKP4-201ENST00000389757 OBSL1O75147 1896 aa8.1□□□□□ -1.11
PKP4-201ENST00000389757 LINC00587B1AMM8 73 aa8.1□□□□□ -1.11
PKP4-201ENST00000389757 LOXL1Q08397 574 aaPredicted RBP8.1□□□□□ -1.11
PKP4-201ENST00000389757 MSMPQ1L6U9 139 aa8.1□□□□□ -1.11
PKP4-201ENST00000389757 FOXI2Q6ZQN5 318 aa8.1□□□□□ -1.11
PKP4-201ENST00000389757 FNDC4Q9H6D8 234 aaPredicted RBP8.1□□□□□ -1.11
PKP4-201ENST00000389757 SSBP2P81877 361 aaPredicted RBP8.09□□□□□ -1.11
PKP4-201ENST00000389757 TRAV2A0A0B4J234 112 aa8.09□□□□□ -1.11
PKP4-201ENST00000389757 TRAV13-1A0A0B4J241 112 aa8.09□□□□□ -1.11
PKP4-201ENST00000389757 IGHV3-16A0A0C4DH30 117 aa8.09□□□□□ -1.11
PKP4-201ENST00000389757 SMKR1H3BMG3 65 aa8.09□□□□□ -1.11
PKP4-201ENST00000389757 SLURP1P55000 103 aa8.09□□□□□ -1.11
PKP4-201ENST00000389757 GUSBP1Q15486 140 aa8.09□□□□□ -1.11
PKP4-201ENST00000389757 ANXA2RQ3ZCQ2 193 aa8.09□□□□□ -1.11
PKP4-201ENST00000389757 SHANK1Q9Y566 2161 aa8.09□□□□□ -1.11
PKP4-201ENST00000389757 K7ERU9 68 aa8.09□□□□□ -1.11
PKP4-201ENST00000389757 C6orf226Q5I0X4 101 aa8.09□□□□□ -1.11
PKP4-201ENST00000389757 DMRTA1Q5VZB9 504 aa8.09□□□□□ -1.11
PKP4-201ENST00000389757 MRAPQ8TCY5 172 aa8.09□□□□□ -1.11
PKP4-201ENST00000389757 TRAV9-2A0A087WT02 112 aa8.08□□□□□ -1.12
PKP4-201ENST00000389757 FAM231BA6NCW3 169 aa8.08□□□□□ -1.12
PKP4-201ENST00000389757 GGTLC3B5MD39 225 aa8.08□□□□□ -1.12
PKP4-201ENST00000389757 PLP1P60201 277 aa8.08□□□□□ -1.12
PKP4-201ENST00000389757 Q8N7P7 452 aa8.08□□□□□ -1.12
PKP4-201ENST00000389757 C5orf56Q8N8D9 126 aa8.08□□□□□ -1.12
PKP4-201ENST00000389757 SCGB1A1P11684 91 aa8.08□□□□□ -1.12
PKP4-201ENST00000389757 Q8N9W7 124 aa8.08□□□□□ -1.12
PKP4-201ENST00000389757 PLEKHB2Q96CS7 222 aa8.08□□□□□ -1.12
PKP4-201ENST00000389757 CT83Q5H943 113 aa8.08□□□□□ -1.12
PKP4-201ENST00000389757 S100A7L2Q5SY68 101 aa8.08□□□□□ -1.12
PKP4-201ENST00000389757 SPAG8Q99932 426 aaPredicted RBP8.08□□□□□ -1.12
PKP4-201ENST00000389757 PTPN13Q12923 2485 aa8.08□□□□□ -1.12
PKP4-201ENST00000389757 LOC102724200A0A096LPH7 203 aaPredicted RBP8.08□□□□□ -1.12
PKP4-201ENST00000389757 TMEM158Q8WZ71 300 aa8.08□□□□□ -1.12
PKP4-201ENST00000389757 SPXQ9BT56 116 aa8.08□□□□□ -1.12
PKP4-201ENST00000389757 SIRPDQ9H106 197 aa8.08□□□□□ -1.12
PKP4-201ENST00000389757 TRBV25-1A0A075B6N4 114 aa8.07□□□□□ -1.12
PKP4-201ENST00000389757 PRSS46E5RG02 174 aa8.07□□□□□ -1.12
PKP4-201ENST00000389757 AJUBAQ96IF1 538 aa8.07□□□□□ -1.12
PKP4-201ENST00000389757 TNFRSF6BO95407 300 aa8.07□□□□□ -1.12
PKP4-201ENST00000389757 IGLV1-47P01700 117 aa8.07□□□□□ -1.12
PKP4-201ENST00000389757 GP9P14770 177 aa8.07□□□□□ -1.12
PKP4-201ENST00000389757 PRR20EP86478 221 aa8.07□□□□□ -1.12
PKP4-201ENST00000389757 PRR20CP86479 221 aa8.07□□□□□ -1.12
PKP4-201ENST00000389757 PRR20DP86480 221 aa8.07□□□□□ -1.12
PKP4-201ENST00000389757 PRR20BP86481 221 aa8.07□□□□□ -1.12
PKP4-201ENST00000389757 PRR20AP86496 221 aa8.07□□□□□ -1.12
PKP4-201ENST00000389757 LINC00518Q8N0U6 118 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms