RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 KLHDC3Q9BQ90 382 aa9.96□□□□□ -0.81
KCNQ3-201ENST00000388996 GUSBP1Q15486 140 aa9.96□□□□□ -0.81
KCNQ3-201ENST00000388996 GFRA4Q9GZZ7 299 aa9.96□□□□□ -0.81
KCNQ3-201ENST00000388996 UBE2E1P51965 193 aa9.96□□□□□ -0.82
KCNQ3-201ENST00000388996 K7ENP7 123 aa9.96□□□□□ -0.82
KCNQ3-201ENST00000388996 SRSF4Q08170 494 aaKnown RBP9.95□□□□□ -0.82
KCNQ3-201ENST00000388996 ADAMTS20P59510 1910 aa9.95□□□□□ -0.82
KCNQ3-201ENST00000388996 HGFACQ04756 655 aa9.95□□□□□ -0.82
KCNQ3-201ENST00000388996 CYTL1Q9NRR1 136 aa9.95□□□□□ -0.82
KCNQ3-201ENST00000388996 ZNF581Q9P0T4 197 aa9.95□□□□□ -0.82
KCNQ3-201ENST00000388996 IGFL4Q6B9Z1 124 aa9.95□□□□□ -0.82
KCNQ3-201ENST00000388996 TRAV13-1A0A0B4J241 112 aa9.95□□□□□ -0.82
KCNQ3-201ENST00000388996 INS-IGF2F8WCM5 200 aa9.95□□□□□ -0.82
KCNQ3-201ENST00000388996 F5H768 121 aa9.94□□□□□ -0.82
KCNQ3-201ENST00000388996 SMKR1H3BMG3 65 aa9.94□□□□□ -0.82
KCNQ3-201ENST00000388996 NDUFB8O95169 186 aa9.94□□□□□ -0.82
KCNQ3-201ENST00000388996 RHODO00212 210 aa9.94□□□□□ -0.82
KCNQ3-201ENST00000388996 FAM110DQ8TAY7 271 aaPredicted RBP9.94□□□□□ -0.82
KCNQ3-201ENST00000388996 TMEM158Q8WZ71 300 aa9.94□□□□□ -0.82
KCNQ3-201ENST00000388996 IGHV1-69DA0A0B4J2H0 117 aa9.94□□□□□ -0.82
KCNQ3-201ENST00000388996 SYS1-DBNDD2H3BUS1 97 aa9.94□□□□□ -0.82
KCNQ3-201ENST00000388996 ATP6V0E1O15342 81 aa9.94□□□□□ -0.82
KCNQ3-201ENST00000388996 IGHV1-69P01742 117 aa9.94□□□□□ -0.82
KCNQ3-201ENST00000388996 GAGE2EQ4V326 116 aa9.94□□□□□ -0.82
KCNQ3-201ENST00000388996 GAGE2DQ9UEU5 116 aa9.94□□□□□ -0.82
KCNQ3-201ENST00000388996 LY6G5BQ8NDX9 201 aa9.94□□□□□ -0.82
KCNQ3-201ENST00000388996 MAST4O15021 2626 aa9.94□□□□□ -0.82
KCNQ3-201ENST00000388996 C1orf194Q5T5A4 169 aa9.93□□□□□ -0.82
KCNQ3-201ENST00000388996 CFHR2P36980 270 aa9.93□□□□□ -0.82
KCNQ3-201ENST00000388996 C6orf226Q5I0X4 101 aa9.93□□□□□ -0.82
KCNQ3-201ENST00000388996 FOXL2NBQ6ZUU3 175 aa9.93□□□□□ -0.82
KCNQ3-201ENST00000388996 DEFB104AQ8WTQ1 72 aa9.93□□□□□ -0.82
KCNQ3-201ENST00000388996 LINC01619G3V211 115 aa9.93□□□□□ -0.82
KCNQ3-201ENST00000388996 KLF12Q9Y4X4 402 aa9.93□□□□□ -0.82
KCNQ3-201ENST00000388996 ZFAND6Q6FIF0 208 aa9.93□□□□□ -0.82
KCNQ3-201ENST00000388996 COL4A4P53420 1690 aaPredicted RBP9.93□□□□□ -0.82
KCNQ3-201ENST00000388996 DKK1O94907 266 aa9.93□□□□□ -0.82
KCNQ3-201ENST00000388996 LYL1P12980 280 aa9.93□□□□□ -0.82
KCNQ3-201ENST00000388996 YPEL3P61236 119 aaPredicted RBP9.93□□□□□ -0.82
KCNQ3-201ENST00000388996 COLCA2A8K830 154 aa9.93□□□□□ -0.82
KCNQ3-201ENST00000388996 DAD1P61803 113 aa9.93□□□□□ -0.82
KCNQ3-201ENST00000388996 BCL6BQ8N143 479 aaPredicted RBP9.93□□□□□ -0.82
KCNQ3-201ENST00000388996 PFN1P07737 140 aaKnown RBP9.93□□□□□ -0.82
KCNQ3-201ENST00000388996 IGFL3Q6UXB1 125 aa9.93□□□□□ -0.82
KCNQ3-201ENST00000388996 TRPT1Q86TN4 253 aaKnown RBP9.92□□□□□ -0.82
KCNQ3-201ENST00000388996 MRPL27Q9P0M9 148 aaKnown RBP9.92□□□□□ -0.82
KCNQ3-201ENST00000388996 ZNF562Q6V9R5 426 aa9.92□□□□□ -0.82
KCNQ3-201ENST00000388996 hDV102S1A0JD36 115 aa9.92□□□□□ -0.82
KCNQ3-201ENST00000388996 ESDP10768 282 aa9.92□□□□□ -0.82
KCNQ3-201ENST00000388996 AMN1Q8IY45 258 aa9.92□□□□□ -0.82
KCNQ3-201ENST00000388996 ZNF833PQ6ZTB9 187 aa9.92□□□□□ -0.82
KCNQ3-201ENST00000388996 CT83Q5H943 113 aa9.91□□□□□ -0.82
KCNQ3-201ENST00000388996 PRIMA1Q86XR5 153 aa9.91□□□□□ -0.82
KCNQ3-201ENST00000388996 CITED1Q99966 193 aa9.91□□□□□ -0.82
KCNQ3-201ENST00000388996 C2orf82Q6UX34 121 aa9.91□□□□□ -0.82
KCNQ3-201ENST00000388996 ZNF492Q9P255 531 aa9.91□□□□□ -0.82
KCNQ3-201ENST00000388996 RNF144BQ7Z419 303 aa9.91□□□□□ -0.82
KCNQ3-201ENST00000388996 A0A087X0K7 114 aa9.91□□□□□ -0.82
KCNQ3-201ENST00000388996 C5orf24Q7Z6I8 188 aa9.91□□□□□ -0.82
KCNQ3-201ENST00000388996 CENPEQ02224 2701 aa9.91□□□□□ -0.82
KCNQ3-201ENST00000388996 HOXD3P31249 432 aaPredicted RBP9.91□□□□□ -0.82
KCNQ3-201ENST00000388996 SIGMAR1Q99720 223 aa9.9□□□□□ -0.82
KCNQ3-201ENST00000388996 CFPP27918 469 aa9.9□□□□□ -0.82
KCNQ3-201ENST00000388996 MAPK1IP1LQ8NDC0 245 aa9.9□□□□□ -0.82
KCNQ3-201ENST00000388996 NDUFA4L2Q9NRX3 87 aa9.9□□□□□ -0.82
KCNQ3-201ENST00000388996 ATRQ13535 2644 aa9.9□□□□□ -0.82
KCNQ3-201ENST00000388996 C8orf49Q96NF6 230 aa9.9□□□□□ -0.82
KCNQ3-201ENST00000388996 NCOR1P1Q9H4R4 102 aa9.9□□□□□ -0.82
KCNQ3-201ENST00000388996 PTPRSQ13332 1948 aa9.9□□□□□ -0.82
KCNQ3-201ENST00000388996 DEFB131AP59861 70 aa9.9□□□□□ -0.82
KCNQ3-201ENST00000388996 KIR3DS1Q14943 382 aa9.9□□□□□ -0.82
KCNQ3-201ENST00000388996 LY6G6EA0A0G2JKS1 128 aa9.9□□□□□ -0.82
KCNQ3-201ENST00000388996 U3KQA8 63 aa9.9□□□□□ -0.82
KCNQ3-201ENST00000388996 APOC4P55056 127 aa9.9□□□□□ -0.82
KCNQ3-201ENST00000388996 Q96MF0 132 aa9.9□□□□□ -0.83
KCNQ3-201ENST00000388996 TNFRSF6BO95407 300 aa9.89□□□□□ -0.83
KCNQ3-201ENST00000388996 CEACAM8P31997 349 aaPredicted RBP9.89□□□□□ -0.83
KCNQ3-201ENST00000388996 C8orf86Q6ZUL3 223 aa9.89□□□□□ -0.83
KCNQ3-201ENST00000388996 KLK9Q9UKQ9 250 aa9.89□□□□□ -0.83
KCNQ3-201ENST00000388996 J3QLI3 93 aa9.89□□□□□ -0.83
KCNQ3-201ENST00000388996 XCL2Q9UBD3 114 aa9.89□□□□□ -0.83
KCNQ3-201ENST00000388996 LINC00205P59089 165 aa9.89□□□□□ -0.83
KCNQ3-201ENST00000388996 TMEM256Q8N2U0 113 aa9.89□□□□□ -0.83
KCNQ3-201ENST00000388996 NKAPP1Q8N9T2 125 aa9.89□□□□□ -0.83
KCNQ3-201ENST00000388996 HAPLN4Q86UW8 402 aa9.89□□□□□ -0.83
KCNQ3-201ENST00000388996 TRBV25-1A0A075B6N4 114 aa9.89□□□□□ -0.83
KCNQ3-201ENST00000388996 IGKV1-6A0A0C4DH72 117 aa9.89□□□□□ -0.83
KCNQ3-201ENST00000388996 CFHR3Q02985 330 aa9.89□□□□□ -0.83
KCNQ3-201ENST00000388996 TMEM141Q96I45 108 aa9.89□□□□□ -0.83
KCNQ3-201ENST00000388996 LURAP1LQ8IV03 231 aa9.89□□□□□ -0.83
KCNQ3-201ENST00000388996 SPINK13Q1W4C9 94 aa9.88□□□□□ -0.83
KCNQ3-201ENST00000388996 ZC2HC1BQ5TFG8 222 aa9.88□□□□□ -0.83
KCNQ3-201ENST00000388996 LIME1Q9H400 295 aa9.88□□□□□ -0.83
KCNQ3-201ENST00000388996 SSBP2P81877 361 aaPredicted RBP9.88□□□□□ -0.83
KCNQ3-201ENST00000388996 SP5Q6BEB4 398 aaPredicted RBP9.88□□□□□ -0.83
KCNQ3-201ENST00000388996 NAA38Q9BRA0 125 aaKnown RBP9.88□□□□□ -0.83
KCNQ3-201ENST00000388996 REG4Q9BYZ8 158 aa9.88□□□□□ -0.83
KCNQ3-201ENST00000388996 ZNRD1Q9P1U0 126 aa9.88□□□□□ -0.83
KCNQ3-201ENST00000388996 I3L3M4 83 aa9.88□□□□□ -0.83
KCNQ3-201ENST00000388996 Q6ZRM9 215 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms