RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 TRAV26-2A0A0B4J265 109 aa9.67□□□□□ -0.86
SHOX-203ENST00000381578 HOXA3O43365 443 aaPredicted RBP9.67□□□□□ -0.86
SHOX-203ENST00000381578 IGHV1-46P01743 117 aa9.67□□□□□ -0.86
SHOX-203ENST00000381578 TMEM200BQ69YZ2 307 aa9.67□□□□□ -0.86
SHOX-203ENST00000381578 PRSS33Q8NF86 280 aa9.67□□□□□ -0.86
SHOX-203ENST00000381578 RNF125Q96EQ8 232 aa9.67□□□□□ -0.86
SHOX-203ENST00000381578 SPAG8Q99932 426 aaPredicted RBP9.67□□□□□ -0.86
SHOX-203ENST00000381578 M0R381 172 aa9.67□□□□□ -0.86
SHOX-203ENST00000381578 SMIM17P0DL12 118 aa9.67□□□□□ -0.86
SHOX-203ENST00000381578 MSMPQ1L6U9 139 aa9.67□□□□□ -0.86
SHOX-203ENST00000381578 LINC00312Q9Y6C7 94 aa9.67□□□□□ -0.86
SHOX-203ENST00000381578 SPRY2O43597 315 aa9.66□□□□□ -0.86
SHOX-203ENST00000381578 EFNA4P52798 201 aa9.66□□□□□ -0.86
SHOX-203ENST00000381578 RAXQ9Y2V3 346 aa9.66□□□□□ -0.86
SHOX-203ENST00000381578 F5H697 171 aa9.66□□□□□ -0.86
SHOX-203ENST00000381578 Q6AWC8 147 aa9.66□□□□□ -0.86
SHOX-203ENST00000381578 PTH2Q96A98 100 aa9.66□□□□□ -0.86
SHOX-203ENST00000381578 LYNX1G3V0Z9 82 aa9.66□□□□□ -0.86
SHOX-203ENST00000381578 LYNX1P0DP58 116 aa9.66□□□□□ -0.86
SHOX-203ENST00000381578 RUSC1-AS1Q66K80 236 aa9.66□□□□□ -0.86
SHOX-203ENST00000381578 PPP1R27Q86WC6 154 aa9.66□□□□□ -0.86
SHOX-203ENST00000381578 TRGV9Q99603 122 aa9.66□□□□□ -0.86
SHOX-203ENST00000381578 A0A1B0GW15 77 aa9.65□□□□□ -0.86
SHOX-203ENST00000381578 C19orf71A6NCJ1 209 aa9.65□□□□□ -0.86
SHOX-203ENST00000381578 GLMPQ8WWB7 406 aa9.65□□□□□ -0.86
SHOX-203ENST00000381578 SCGB3A1Q96QR1 104 aa9.65□□□□□ -0.86
SHOX-203ENST00000381578 IGKV1D-37A0A075B6S9 117 aa9.65□□□□□ -0.86
SHOX-203ENST00000381578 C12orf74Q32Q52 190 aa9.65□□□□□ -0.86
SHOX-203ENST00000381578 UFSP1Q6NVU6 142 aa9.65□□□□□ -0.86
SHOX-203ENST00000381578 LYPD2Q6UXB3 125 aa9.65□□□□□ -0.86
SHOX-203ENST00000381578 TRAV8-2A0A0B4J237 113 aa9.65□□□□□ -0.87
SHOX-203ENST00000381578 IGLL5B9A064 214 aa9.65□□□□□ -0.87
SHOX-203ENST00000381578 TNFRSF6BO95407 300 aa9.65□□□□□ -0.87
SHOX-203ENST00000381578 CEND1Q8N111 149 aa9.65□□□□□ -0.87
SHOX-203ENST00000381578 LINC01549A6NIU2 74 aa9.64□□□□□ -0.87
SHOX-203ENST00000381578 ZNF815PA8K554 130 aa9.64□□□□□ -0.87
SHOX-203ENST00000381578 GP9P14770 177 aa9.64□□□□□ -0.87
SHOX-203ENST00000381578 HLA-DMBP28068 263 aa9.64□□□□□ -0.87
SHOX-203ENST00000381578 CCDC144NLQ6NUI1 221 aa9.64□□□□□ -0.87
SHOX-203ENST00000381578 MDS2Q8NDY4 140 aa9.64□□□□□ -0.87
SHOX-203ENST00000381578 MLST8Q9BVC4 326 aa9.64□□□□□ -0.87
SHOX-203ENST00000381578 PRSS22Q9GZN4 317 aa9.64□□□□□ -0.87
SHOX-203ENST00000381578 ASPMQ8IZT6 3477 aa9.64□□□□□ -0.87
SHOX-203ENST00000381578 F8W1H4 67 aa9.64□□□□□ -0.87
SHOX-203ENST00000381578 ERCC8Q13216 396 aa9.64□□□□□ -0.87
SHOX-203ENST00000381578 MRAP2Q96G30 205 aa9.64□□□□□ -0.87
SHOX-203ENST00000381578 USP9YO00507 2555 aaPredicted RBP9.64□□□□□ -0.87
SHOX-203ENST00000381578 TET2Q6N021 2002 aaPredicted RBP9.64□□□□□ -0.87
SHOX-203ENST00000381578 APOBEC3AP31941 199 aaPredicted RBP9.64□□□□□ -0.87
SHOX-203ENST00000381578 TTC32Q5I0X7 151 aa9.64□□□□□ -0.87
SHOX-203ENST00000381578 NEGR1Q7Z3B1 354 aa9.64□□□□□ -0.87
SHOX-203ENST00000381578 TM4SF5O14894 197 aa9.63□□□□□ -0.87
SHOX-203ENST00000381578 ATP5LO75964 103 aa9.63□□□□□ -0.87
SHOX-203ENST00000381578 TRBV19A0A075B6N1 114 aa9.63□□□□□ -0.87
SHOX-203ENST00000381578 TMEM238LA0A1B0GVL6 79 aa9.63□□□□□ -0.87
SHOX-203ENST00000381578 A6NJY4 79 aa9.63□□□□□ -0.87
SHOX-203ENST00000381578 B5MCH6 92 aa9.63□□□□□ -0.87
SHOX-203ENST00000381578 POU2AF1Q16633 256 aa9.63□□□□□ -0.87
SHOX-203ENST00000381578 TMEM170BQ5T4T1 132 aa9.63□□□□□ -0.87
SHOX-203ENST00000381578 TEX29Q8N6K0 151 aa9.63□□□□□ -0.87
SHOX-203ENST00000381578 KLF12Q9Y4X4 402 aa9.63□□□□□ -0.87
SHOX-203ENST00000381578 ECSCRQ19T08 205 aa9.62□□□□□ -0.87
SHOX-203ENST00000381578 FOXI2Q6ZQN5 318 aa9.62□□□□□ -0.87
SHOX-203ENST00000381578 NXT2Q9NPJ8 142 aaKnown RBP9.62□□□□□ -0.87
SHOX-203ENST00000381578 FGF6P10767 208 aa9.62□□□□□ -0.87
SHOX-203ENST00000381578 WT1P19544 449 aaPredicted RBP9.62□□□□□ -0.87
SHOX-203ENST00000381578 PRSS2P07478 247 aa9.61□□□□□ -0.87
SHOX-203ENST00000381578 EGR2P11161 476 aaPredicted RBP9.61□□□□□ -0.87
SHOX-203ENST00000381578 TRBV20-1A0A075B6N2 111 aa9.61□□□□□ -0.87
SHOX-203ENST00000381578 IGHV3-64A0A075B6Q5 118 aa9.61□□□□□ -0.87
SHOX-203ENST00000381578 HLA-DRB4P13762 266 aa9.61□□□□□ -0.87
SHOX-203ENST00000381578 RAX2Q96IS3 184 aa9.61□□□□□ -0.87
SHOX-203ENST00000381578 HLA-DRB4X5D2U9 266 aa9.61□□□□□ -0.87
SHOX-203ENST00000381578 ZFYVE26Q68DK2 2539 aa9.61□□□□□ -0.87
SHOX-203ENST00000381578 FABP5P3A8MUU1 101 aa9.61□□□□□ -0.87
SHOX-203ENST00000381578 C16orf97H3BN30 126 aa9.61□□□□□ -0.87
SHOX-203ENST00000381578 LYRM7Q5U5X0 104 aa9.61□□□□□ -0.87
SHOX-203ENST00000381578 SIGLEC9Q9Y336 463 aa9.61□□□□□ -0.87
SHOX-203ENST00000381578 SLC25A15Q9Y619 301 aa9.61□□□□□ -0.87
SHOX-203ENST00000381578 GAS8-AS1O95177 125 aa9.6□□□□□ -0.87
SHOX-203ENST00000381578 MFAP4P55083 255 aa9.6□□□□□ -0.87
SHOX-203ENST00000381578 TMEM78Q5T7P6 136 aa9.6□□□□□ -0.87
SHOX-203ENST00000381578 THAP8Q8NA92 274 aa9.6□□□□□ -0.87
SHOX-203ENST00000381578 DLX4Q92988 240 aaPredicted RBP9.6□□□□□ -0.87
SHOX-203ENST00000381578 ABHD17AQ96GS6 310 aa9.6□□□□□ -0.87
SHOX-203ENST00000381578 SPANXB1Q9NS25 103 aaPredicted RBP9.6□□□□□ -0.87
SHOX-203ENST00000381578 SNCGO76070 127 aa9.6□□□□□ -0.87
SHOX-203ENST00000381578 ZNF562Q6V9R5 426 aa9.6□□□□□ -0.87
SHOX-203ENST00000381578 SIVA1O15304 175 aa9.6□□□□□ -0.87
SHOX-203ENST00000381578 RNF182Q8N6D2 247 aa9.6□□□□□ -0.87
SHOX-203ENST00000381578 C7orf69Q9H7B7 122 aa9.6□□□□□ -0.87
SHOX-203ENST00000381578 NBL1P41271 181 aa9.59□□□□□ -0.87
SHOX-203ENST00000381578 DLX6P56179 175 aa9.59□□□□□ -0.87
SHOX-203ENST00000381578 ZNF48Q96MX3 618 aaPredicted RBP9.59□□□□□ -0.87
SHOX-203ENST00000381578 IGHV4-39P01824 125 aa9.59□□□□□ -0.87
SHOX-203ENST00000381578 MT-ATP8P03928 68 aa9.59□□□□□ -0.87
SHOX-203ENST00000381578 ZNF833PQ6ZTB9 187 aa9.59□□□□□ -0.87
SHOX-203ENST00000381578 A8MWV9 139 aa9.59□□□□□ -0.87
SHOX-203ENST00000381578 ASCL5Q7RTU5 278 aa9.59□□□□□ -0.87
SHOX-203ENST00000381578 SHANK2-AS3Q9BTD1 123 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms