RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 LOC107984156A0A0G2JMH3 177 aa10.92□□□□□ -0.66
SDC1-202ENST00000381150 FAM104BQ5XKR9 115 aa10.92□□□□□ -0.66
SDC1-202ENST00000381150 ARL17AQ8IVW1 177 aa10.92□□□□□ -0.66
SDC1-202ENST00000381150 ZNF418Q8TF45 676 aaPredicted RBP10.92□□□□□ -0.66
SDC1-202ENST00000381150 TMEM30BQ3MIR4 351 aa10.92□□□□□ -0.66
SDC1-202ENST00000381150 PRR30Q53SZ7 412 aaPredicted RBP10.92□□□□□ -0.66
SDC1-202ENST00000381150 TMEM200BQ69YZ2 307 aa10.92□□□□□ -0.66
SDC1-202ENST00000381150 AAMDCQ9H7C9 122 aa10.92□□□□□ -0.66
SDC1-202ENST00000381150 NGBQ9NPG2 151 aa10.92□□□□□ -0.66
SDC1-202ENST00000381150 ARHGAP32A7KAX9 2087 aa10.92□□□□□ -0.66
SDC1-202ENST00000381150 TRBV25-1A0A075B6N4 114 aa10.91□□□□□ -0.66
SDC1-202ENST00000381150 GFRALQ6UXV0 394 aa10.91□□□□□ -0.66
SDC1-202ENST00000381150 SPAG8Q99932 426 aaPredicted RBP10.91□□□□□ -0.66
SDC1-202ENST00000381150 RALYQ9UKM9 306 aaKnown RBP10.91□□□□□ -0.66
SDC1-202ENST00000381150 UFC1Q9Y3C8 167 aa10.91□□□□□ -0.66
SDC1-202ENST00000381150 AGRNO00468 2067 aa10.91□□□□□ -0.66
SDC1-202ENST00000381150 CCDC144NLQ6NUI1 221 aa10.91□□□□□ -0.66
SDC1-202ENST00000381150 THAP8Q8NA92 274 aa10.91□□□□□ -0.66
SDC1-202ENST00000381150 TMEM8BA6NDV4 472 aa10.9□□□□□ -0.66
SDC1-202ENST00000381150 TMEM178BH3BS89 294 aa10.9□□□□□ -0.66
SDC1-202ENST00000381150 IGLV2-11P01706 119 aa10.9□□□□□ -0.66
SDC1-202ENST00000381150 SCNM1Q9BWG6 230 aa10.9□□□□□ -0.66
SDC1-202ENST00000381150 SH2D1AO60880 128 aa10.9□□□□□ -0.66
SDC1-202ENST00000381150 GAGE13Q4V321 117 aa10.9□□□□□ -0.66
SDC1-202ENST00000381150 ZNF833PQ6ZTB9 187 aa10.9□□□□□ -0.66
SDC1-202ENST00000381150 J3KRW8 73 aa10.9□□□□□ -0.67
SDC1-202ENST00000381150 LYPD2Q6UXB3 125 aa10.9□□□□□ -0.67
SDC1-202ENST00000381150 TRGV9Q99603 122 aa10.9□□□□□ -0.67
SDC1-202ENST00000381150 C20orf78Q9BR46 151 aa10.9□□□□□ -0.67
SDC1-202ENST00000381150 MAP1LC3AQ9H492 121 aa10.9□□□□□ -0.67
SDC1-202ENST00000381150 IGHV3OR16-13A0A075B7E8 117 aa10.89□□□□□ -0.67
SDC1-202ENST00000381150 IGHV3-74A0A0B4J1X5 117 aa10.89□□□□□ -0.67
SDC1-202ENST00000381150 IGKCP01834 107 aa10.89□□□□□ -0.67
SDC1-202ENST00000381150 SMIM17P0DL12 118 aa10.89□□□□□ -0.67
SDC1-202ENST00000381150 SHISA9B4DS77 424 aa10.89□□□□□ -0.67
SDC1-202ENST00000381150 NDUFB3O43676 98 aa10.89□□□□□ -0.67
SDC1-202ENST00000381150 TMEM158Q8WZ71 300 aa10.89□□□□□ -0.67
SDC1-202ENST00000381150 SRSF8Q9BRL6 282 aaKnown RBP10.89□□□□□ -0.67
SDC1-202ENST00000381150 CYSLTR1Q9Y271 337 aa10.89□□□□□ -0.67
SDC1-202ENST00000381150 ZNF785A8K8V0 405 aa10.89□□□□□ -0.67
SDC1-202ENST00000381150 H3BVH4 76 aa10.89□□□□□ -0.67
SDC1-202ENST00000381150 K7ENP7 123 aa10.89□□□□□ -0.67
SDC1-202ENST00000381150 TRBV19A0A075B6N1 114 aa10.88□□□□□ -0.67
SDC1-202ENST00000381150 APOMO95445 188 aa10.88□□□□□ -0.67
SDC1-202ENST00000381150 CRYBA4P53673 196 aa10.88□□□□□ -0.67
SDC1-202ENST00000381150 RNASE6Q93091 150 aaKnown RBP10.88□□□□□ -0.67
SDC1-202ENST00000381150 TLN1Q9Y490 2541 aaKnown RBP10.88□□□□□ -0.67
SDC1-202ENST00000381150 TRAV26-2A0A0B4J265 109 aa10.87□□□□□ -0.67
SDC1-202ENST00000381150 E7EQL1 145 aa10.87□□□□□ -0.67
SDC1-202ENST00000381150 NDUFS8O00217 210 aa10.87□□□□□ -0.67
SDC1-202ENST00000381150 HLA-DMBP28068 263 aa10.87□□□□□ -0.67
SDC1-202ENST00000381150 HES1Q14469 280 aa10.87□□□□□ -0.67
SDC1-202ENST00000381150 GEMIN7Q9H840 131 aaKnown RBP10.87□□□□□ -0.67
SDC1-202ENST00000381150 CTSZQ9UBR2 303 aa10.87□□□□□ -0.67
SDC1-202ENST00000381150 ATRXP46100 2492 aa10.87□□□□□ -0.67
SDC1-202ENST00000381150 IGLL5B9A064 214 aa10.87□□□□□ -0.67
SDC1-202ENST00000381150 MRPL35Q9NZE8 188 aaKnown RBP10.87□□□□□ -0.67
SDC1-202ENST00000381150 FOXC1Q12948 553 aa10.87□□□□□ -0.67
SDC1-202ENST00000381150 SYT8Q8NBV8 401 aa10.87□□□□□ -0.67
SDC1-202ENST00000381150 SPANXB1Q9NS25 103 aaPredicted RBP10.87□□□□□ -0.67
SDC1-202ENST00000381150 IGHV3-66A0A0C4DH42 116 aa10.86□□□□□ -0.67
SDC1-202ENST00000381150 IGLV2-23P01705 113 aa10.86□□□□□ -0.67
SDC1-202ENST00000381150 EGR2P11161 476 aaPredicted RBP10.86□□□□□ -0.67
SDC1-202ENST00000381150 DLX6P56179 175 aa10.86□□□□□ -0.67
SDC1-202ENST00000381150 CEND1Q8N111 149 aa10.86□□□□□ -0.67
SDC1-202ENST00000381150 TTC9CQ8N5M4 171 aa10.86□□□□□ -0.67
SDC1-202ENST00000381150 MAPKAPK5-AS1Q8N8E1 139 aa10.86□□□□□ -0.67
SDC1-202ENST00000381150 MRPL16Q9NX20 251 aaKnown RBP10.86□□□□□ -0.67
SDC1-202ENST00000381150 SPRY2O43597 315 aa10.85□□□□□ -0.67
SDC1-202ENST00000381150 PSMB2P49721 201 aa10.85□□□□□ -0.67
SDC1-202ENST00000381150 EFNA4P52798 201 aa10.85□□□□□ -0.67
SDC1-202ENST00000381150 PTH2Q96A98 100 aa10.85□□□□□ -0.67
SDC1-202ENST00000381150 DPM2O94777 84 aa10.85□□□□□ -0.67
SDC1-202ENST00000381150 C12orf74Q32Q52 190 aa10.85□□□□□ -0.67
SDC1-202ENST00000381150 SCGB1D4Q6XE38 83 aa10.85□□□□□ -0.67
SDC1-202ENST00000381150 FOXI2Q6ZQN5 318 aa10.85□□□□□ -0.67
SDC1-202ENST00000381150 PPP1R27Q86WC6 154 aa10.85□□□□□ -0.67
SDC1-202ENST00000381150 GLMPQ8WWB7 406 aa10.85□□□□□ -0.67
SDC1-202ENST00000381150 RNF125Q96EQ8 232 aa10.85□□□□□ -0.67
SDC1-202ENST00000381150 DCHS2Q6V1P9 2916 aa10.85□□□□□ -0.67
SDC1-202ENST00000381150 SIVA1O15304 175 aa10.85□□□□□ -0.67
SDC1-202ENST00000381150 SPINK8P0C7L1 97 aa10.85□□□□□ -0.67
SDC1-202ENST00000381150 LOXP28300 417 aaPredicted RBP10.85□□□□□ -0.67
SDC1-202ENST00000381150 ZNF562Q6V9R5 426 aa10.85□□□□□ -0.67
SDC1-202ENST00000381150 SIGLEC15Q6ZMC9 328 aa10.85□□□□□ -0.67
SDC1-202ENST00000381150 MYOZ3Q8TDC0 251 aa10.85□□□□□ -0.67
SDC1-202ENST00000381150 RPEQ96AT9 228 aa10.85□□□□□ -0.67
SDC1-202ENST00000381150 KAAG1Q9UBP8 84 aa10.85□□□□□ -0.67
SDC1-202ENST00000381150 SPG11Q96JI7 2443 aa10.84□□□□□ -0.67
SDC1-202ENST00000381150 ANXA2RQ3ZCQ2 193 aa10.84□□□□□ -0.67
SDC1-202ENST00000381150 LINC00311Q8N616 119 aa10.84□□□□□ -0.67
SDC1-202ENST00000381150 C8orf31Q8N9H6 132 aa10.84□□□□□ -0.67
SDC1-202ENST00000381150 HIF1ANQ9NWT6 349 aa10.84□□□□□ -0.67
SDC1-202ENST00000381150 IGHV3-49A0A0A0MS15 119 aa10.84□□□□□ -0.67
SDC1-202ENST00000381150 TNFRSF6BO95407 300 aa10.84□□□□□ -0.67
SDC1-202ENST00000381150 IGKV1-17P01599 117 aa10.84□□□□□ -0.67
SDC1-202ENST00000381150 SRSF9Q13242 221 aaKnown RBP eCLIP10.84□□□□□ -0.67
SDC1-202ENST00000381150 ODF1Q14990 250 aa10.84□□□□□ -0.67
SDC1-202ENST00000381150 F8W1H4 67 aa10.83□□□□□ -0.67
SDC1-202ENST00000381150 ARL3P36405 182 aa10.83□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms