RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 FXYD7P58549 80 aa12.64□□□□□ -0.39
VPS16-203ENST00000380469 ZFAND3Q9H8U3 227 aa12.64□□□□□ -0.39
VPS16-203ENST00000380469 RBAKDNA6NC62 111 aa12.63□□□□□ -0.39
VPS16-203ENST00000380469 ATP6V0E1O15342 81 aa12.63□□□□□ -0.39
VPS16-203ENST00000380469 PPBPP02775 128 aa12.63□□□□□ -0.39
VPS16-203ENST00000380469 CACNG7P62955 275 aa12.63□□□□□ -0.39
VPS16-203ENST00000380469 SLC50A1Q9BRV3 221 aa12.63□□□□□ -0.39
VPS16-203ENST00000380469 CBY3A6NI87 242 aa12.63□□□□□ -0.39
VPS16-203ENST00000380469 SNAI2O43623 268 aa12.63□□□□□ -0.39
VPS16-203ENST00000380469 PAX8Q06710 450 aa12.63□□□□□ -0.39
VPS16-203ENST00000380469 C2orf91Q6ZV80 131 aa12.63□□□□□ -0.39
VPS16-203ENST00000380469 IFI27L1Q96BM0 104 aa12.63□□□□□ -0.39
VPS16-203ENST00000380469 MAP1LC3AQ9H492 121 aa12.63□□□□□ -0.39
VPS16-203ENST00000380469 HRNRQ86YZ3 2850 aaPredicted RBP12.62□□□□□ -0.39
VPS16-203ENST00000380469 PRAC2D3DTV9 90 aa12.62□□□□□ -0.39
VPS16-203ENST00000380469 NDUFS7O75251 213 aa12.62□□□□□ -0.39
VPS16-203ENST00000380469 KLK9Q2XQG4 91 aa12.62□□□□□ -0.39
VPS16-203ENST00000380469 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.62□□□□□ -0.39
VPS16-203ENST00000380469 ZNF575Q86XF7 245 aa12.62□□□□□ -0.39
VPS16-203ENST00000380469 CNFNQ9BYD5 112 aa12.62□□□□□ -0.39
VPS16-203ENST00000380469 KLK9Q9UKQ9 250 aa12.62□□□□□ -0.39
VPS16-203ENST00000380469 LINC01559Q495D7 138 aa12.62□□□□□ -0.39
VPS16-203ENST00000380469 ANKRD39Q53RE8 183 aa12.62□□□□□ -0.39
VPS16-203ENST00000380469 CLEC19AQ6UXS0 136 aa12.62□□□□□ -0.39
VPS16-203ENST00000380469 ERASQ7Z444 233 aa12.62□□□□□ -0.39
VPS16-203ENST00000380469 RNF182Q8N6D2 247 aa12.62□□□□□ -0.39
VPS16-203ENST00000380469 MSRB1Q9NZV6 116 aa12.62□□□□□ -0.39
VPS16-203ENST00000380469 IGHV3-66A0A0C4DH42 116 aa12.61□□□□□ -0.39
VPS16-203ENST00000380469 K7EP13 123 aa12.61□□□□□ -0.39
VPS16-203ENST00000380469 SAA4P35542 130 aa12.61□□□□□ -0.39
VPS16-203ENST00000380469 PRSS57Q6UWY2 283 aa12.61□□□□□ -0.39
VPS16-203ENST00000380469 PIP4P2Q8N4L2 257 aa12.61□□□□□ -0.39
VPS16-203ENST00000380469 EEF1AKMT3Q96AZ1 226 aa12.61□□□□□ -0.39
VPS16-203ENST00000380469 RNF185Q96GF1 192 aa12.61□□□□□ -0.39
VPS16-203ENST00000380469 WNK2Q9Y3S1 2297 aa12.61□□□□□ -0.39
VPS16-203ENST00000380469 TMEM97Q5BJF2 176 aa12.61□□□□□ -0.39
VPS16-203ENST00000380469 IL17RELQ6ZVW7 336 aa12.61□□□□□ -0.39
VPS16-203ENST00000380469 AJUBAQ96IF1 538 aa12.61□□□□□ -0.39
VPS16-203ENST00000380469 UBTD1Q9HAC8 227 aa12.61□□□□□ -0.39
VPS16-203ENST00000380469 NPFFR1Q9GZQ6 430 aa12.6□□□□□ -0.39
VPS16-203ENST00000380469 RELNP78509 3460 aa12.6□□□□□ -0.39
VPS16-203ENST00000380469 EFNA4P52798 201 aa12.6□□□□□ -0.39
VPS16-203ENST00000380469 SEC11AP67812 179 aa12.6□□□□□ -0.39
VPS16-203ENST00000380469 METTL26Q96S19 204 aa12.6□□□□□ -0.39
VPS16-203ENST00000380469 TRBV7-1A0A0A6YYK4 115 aa12.59□□□□□ -0.39
VPS16-203ENST00000380469 CLPSL1A2RUU4 121 aa12.59□□□□□ -0.39
VPS16-203ENST00000380469 G3V318 75 aa12.59□□□□□ -0.39
VPS16-203ENST00000380469 FGF6P10767 208 aa12.59□□□□□ -0.39
VPS16-203ENST00000380469 CCDC140Q96MF4 163 aa12.59□□□□□ -0.39
VPS16-203ENST00000380469 NXT2Q9NPJ8 142 aaKnown RBP12.59□□□□□ -0.39
VPS16-203ENST00000380469 A0A1W2PPR1 153 aa12.59□□□□□ -0.39
VPS16-203ENST00000380469 TMEM78Q5T7P6 136 aa12.59□□□□□ -0.39
VPS16-203ENST00000380469 CSMD1Q96PZ7 3565 aa12.58□□□□□ -0.4
VPS16-203ENST00000380469 IGHV3OR16-13A0A075B7E8 117 aa12.58□□□□□ -0.4
VPS16-203ENST00000380469 IGHV3-74A0A0B4J1X5 117 aa12.58□□□□□ -0.4
VPS16-203ENST00000380469 TNFRSF6BO95407 300 aa12.58□□□□□ -0.4
VPS16-203ENST00000380469 PPIFP30405 207 aaKnown RBP12.58□□□□□ -0.4
VPS16-203ENST00000380469 FOXE3Q13461 319 aa12.58□□□□□ -0.4
VPS16-203ENST00000380469 AMMECR1LQ6DCA0 310 aa12.58□□□□□ -0.4
VPS16-203ENST00000380469 BOD1L2Q8IYS8 172 aa12.58□□□□□ -0.4
VPS16-203ENST00000380469 RNASE8Q8TDE3 154 aaKnown RBP12.58□□□□□ -0.4
VPS16-203ENST00000380469 PSMG3-AS1Q96PY0 264 aa12.58□□□□□ -0.4
VPS16-203ENST00000380469 AGPAT4-IT1Q9H0P7 198 aa12.58□□□□□ -0.4
VPS16-203ENST00000380469 NBASA2RRP1 2371 aa12.58□□□□□ -0.4
VPS16-203ENST00000380469 CENPVL3A0A0U1RRI6 287 aa12.57□□□□□ -0.4
VPS16-203ENST00000380469 LINC01546A6NGU7 62 aa12.57□□□□□ -0.4
VPS16-203ENST00000380469 SMAD7O15105 426 aaKnown RBP12.57□□□□□ -0.4
VPS16-203ENST00000380469 LEPP41159 167 aa12.57□□□□□ -0.4
VPS16-203ENST00000380469 PEF1Q9UBV8 284 aaKnown RBP12.57□□□□□ -0.4
VPS16-203ENST00000380469 LINC01548A6NM66 108 aa12.57□□□□□ -0.4
VPS16-203ENST00000380469 NPFFO15130 113 aa12.57□□□□□ -0.4
VPS16-203ENST00000380469 FCER1GP30273 86 aa12.57□□□□□ -0.4
VPS16-203ENST00000380469 SMIM15Q7Z3B0 74 aa12.57□□□□□ -0.4
VPS16-203ENST00000380469 WFDC3Q8IUB2 231 aa12.57□□□□□ -0.4
VPS16-203ENST00000380469 OR9G4Q8NGQ1 327 aa12.57□□□□□ -0.4
VPS16-203ENST00000380469 MRPL53Q96EL3 112 aaKnown RBP12.57□□□□□ -0.4
VPS16-203ENST00000380469 A1L4Q6 167 aa12.56□□□□□ -0.4
VPS16-203ENST00000380469 C7orf71A4D174 169 aa12.56□□□□□ -0.4
VPS16-203ENST00000380469 SIVA1O15304 175 aa12.56□□□□□ -0.4
VPS16-203ENST00000380469 ATP5G2Q06055 141 aa12.56□□□□□ -0.4
VPS16-203ENST00000380469 C18orf15Q96N68 181 aa12.56□□□□□ -0.4
VPS16-203ENST00000380469 HIF1ANQ9NWT6 349 aa12.56□□□□□ -0.4
VPS16-203ENST00000380469 IGHV3-49A0A0A0MS15 119 aa12.56□□□□□ -0.4
VPS16-203ENST00000380469 IGKV3D-20A0A0C4DH25 116 aa12.56□□□□□ -0.4
VPS16-203ENST00000380469 ZNF207O43670 478 aaKnown RBP12.56□□□□□ -0.4
VPS16-203ENST00000380469 EVI2AP22794 236 aa12.56□□□□□ -0.4
VPS16-203ENST00000380469 LMO4P61968 165 aa12.56□□□□□ -0.4
VPS16-203ENST00000380469 TRAV8-2A0A0B4J237 113 aa12.55□□□□□ -0.4
VPS16-203ENST00000380469 A6NDN8 102 aa12.55□□□□□ -0.4
VPS16-203ENST00000380469 TCTAP57738 103 aa12.55□□□□□ -0.4
VPS16-203ENST00000380469 C8orf86Q6ZUL3 223 aa12.55□□□□□ -0.4
VPS16-203ENST00000380469 COL25A1Q9BXS0 654 aaPredicted RBP12.55□□□□□ -0.4
VPS16-203ENST00000380469 BPESC1Q9GZL8 116 aa12.55□□□□□ -0.4
VPS16-203ENST00000380469 DKK2Q9UBU2 259 aa12.55□□□□□ -0.4
VPS16-203ENST00000380469 GAS8-AS1O95177 125 aa12.55□□□□□ -0.4
VPS16-203ENST00000380469 PSMG4Q5JS54 123 aa12.55□□□□□ -0.4
VPS16-203ENST00000380469 C5orf56Q8N8D9 126 aa12.55□□□□□ -0.4
VPS16-203ENST00000380469 UQCRFS1P47985 274 aa12.54□□□□□ -0.4
VPS16-203ENST00000380469 NMUP48645 174 aa12.54□□□□□ -0.4
VPS16-203ENST00000380469 OR4X2Q8NGF9 303 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms