RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 CCL18P55774 89 aa9.99□□□□□ -0.81
CHD3-203ENST00000380358 SYS1-DBNDD2H3BUS1 97 aa9.98□□□□□ -0.81
CHD3-203ENST00000380358 RHODO00212 210 aa9.98□□□□□ -0.81
CHD3-203ENST00000380358 LINC00271P0C7V0 271 aa9.98□□□□□ -0.81
CHD3-203ENST00000380358 CAMK2N2Q96S95 79 aa9.98□□□□□ -0.81
CHD3-203ENST00000380358 PATJQ8NI35 1801 aa9.98□□□□□ -0.81
CHD3-203ENST00000380358 LINC01549A6NIU2 74 aa9.98□□□□□ -0.81
CHD3-203ENST00000380358 GPHB5Q86YW7 130 aa9.98□□□□□ -0.81
CHD3-203ENST00000380358 HIST1H2BLQ99880 126 aa9.98□□□□□ -0.81
CHD3-203ENST00000380358 TMEM258P61165 79 aa9.98□□□□□ -0.81
CHD3-203ENST00000380358 GGNQ86UU5 652 aa9.98□□□□□ -0.81
CHD3-203ENST00000380358 RNF138Q8WVD3 245 aa9.98□□□□□ -0.81
CHD3-203ENST00000380358 U3KQE9 123 aa9.98□□□□□ -0.81
CHD3-203ENST00000380358 BCORQ6W2J9 1755 aa9.98□□□□□ -0.81
CHD3-203ENST00000380358 SRRM5B3KS81 715 aa9.98□□□□□ -0.81
CHD3-203ENST00000380358 CCL24O00175 119 aa9.98□□□□□ -0.81
CHD3-203ENST00000380358 SEC61GP60059 68 aa9.98□□□□□ -0.81
CHD3-203ENST00000380358 IGKV1D-17A0A075B6S4 117 aa9.98□□□□□ -0.81
CHD3-203ENST00000380358 C3orf79P0CE67 100 aa9.98□□□□□ -0.81
CHD3-203ENST00000380358 K7ERJ3 54 aa9.98□□□□□ -0.81
CHD3-203ENST00000380358 RNF144BQ7Z419 303 aa9.98□□□□□ -0.81
CHD3-203ENST00000380358 SDHAF1A6NFY7 115 aa9.97□□□□□ -0.81
CHD3-203ENST00000380358 SLURP1P55000 103 aa9.97□□□□□ -0.81
CHD3-203ENST00000380358 TET1Q8NFU7 2136 aa9.97□□□□□ -0.81
CHD3-203ENST00000380358 LAIR2Q6ISS4 152 aa9.97□□□□□ -0.81
CHD3-203ENST00000380358 NDUFA12Q9UI09 145 aa9.97□□□□□ -0.81
CHD3-203ENST00000380358 ARFGEF1Q9Y6D6 1849 aa9.97□□□□□ -0.81
CHD3-203ENST00000380358 ACYP1P07311 99 aa9.97□□□□□ -0.81
CHD3-203ENST00000380358 PKD1L3Q7Z443 1732 aa9.97□□□□□ -0.81
CHD3-203ENST00000380358 GVINP1Q7Z2Y8 2422 aa9.97□□□□□ -0.81
CHD3-203ENST00000380358 VWCEQ96DN2 955 aa9.97□□□□□ -0.81
CHD3-203ENST00000380358 GREB1Q4ZG55 1949 aa9.97□□□□□ -0.81
CHD3-203ENST00000380358 CDKN1BP46527 198 aa9.97□□□□□ -0.81
CHD3-203ENST00000380358 CD200R1LQ6Q8B3 271 aa9.97□□□□□ -0.81
CHD3-203ENST00000380358 C2orf66Q6UXQ4 117 aa9.97□□□□□ -0.81
CHD3-203ENST00000380358 COX7B2Q8TF08 81 aa9.97□□□□□ -0.81
CHD3-203ENST00000380358 KIF13BQ9NQT8 1826 aa9.97□□□□□ -0.81
CHD3-203ENST00000380358 TNCP24821 2201 aa9.97□□□□□ -0.81
CHD3-203ENST00000380358 H0YIZ8 118 aa9.96□□□□□ -0.81
CHD3-203ENST00000380358 FAM104BQ5XKR9 115 aa9.96□□□□□ -0.81
CHD3-203ENST00000380358 CARD19Q96LW7 228 aa9.96□□□□□ -0.81
CHD3-203ENST00000380358 REG4Q9BYZ8 158 aa9.96□□□□□ -0.81
CHD3-203ENST00000380358 LY75O60449 1722 aa9.96□□□□□ -0.81
CHD3-203ENST00000380358 GNRH2O43555 120 aa9.96□□□□□ -0.81
CHD3-203ENST00000380358 AMBPP02760 352 aa9.96□□□□□ -0.81
CHD3-203ENST00000380358 IGFBP3P17936 291 aaPredicted RBP9.96□□□□□ -0.81
CHD3-203ENST00000380358 MRPS18CQ9Y3D5 142 aaKnown RBP9.96□□□□□ -0.81
CHD3-203ENST00000380358 ZFP36P26651 326 aaKnown RBP9.96□□□□□ -0.81
CHD3-203ENST00000380358 AMTNQ6UX39 209 aa9.96□□□□□ -0.81
CHD3-203ENST00000380358 WDR83OSQ9Y284 106 aa9.96□□□□□ -0.81
CHD3-203ENST00000380358 TAF1LQ8IZX4 1826 aa9.96□□□□□ -0.81
CHD3-203ENST00000380358 NRXN3Q9Y4C0 1643 aa9.96□□□□□ -0.81
CHD3-203ENST00000380358 TRAV4A0A0B4J268 109 aa9.96□□□□□ -0.82
CHD3-203ENST00000380358 GYPEP15421 78 aa9.96□□□□□ -0.82
CHD3-203ENST00000380358 PLXNA1Q9UIW2 1896 aa9.96□□□□□ -0.82
CHD3-203ENST00000380358 IGHV1-24A0A0C4DH33 117 aa9.96□□□□□ -0.82
CHD3-203ENST00000380358 IGKV2-24A0A0C4DH68 120 aa9.96□□□□□ -0.82
CHD3-203ENST00000380358 IGHV4-59P01825 116 aa9.96□□□□□ -0.82
CHD3-203ENST00000380358 IGKV4-1P06312 121 aa9.96□□□□□ -0.82
CHD3-203ENST00000380358 ZFP36L1Q07352 338 aaKnown RBP9.96□□□□□ -0.82
CHD3-203ENST00000380358 COL22A1Q8NFW1 1626 aaPredicted RBP9.95□□□□□ -0.82
CHD3-203ENST00000380358 HLA-DMBP28068 263 aa9.95□□□□□ -0.82
CHD3-203ENST00000380358 GAGE12HA6NDE8 117 aa9.95□□□□□ -0.82
CHD3-203ENST00000380358 PROP1O75360 226 aa9.95□□□□□ -0.82
CHD3-203ENST00000380358 IGHG2P01859 326 aa9.95□□□□□ -0.82
CHD3-203ENST00000380358 NDUFS7O75251 213 aa9.95□□□□□ -0.82
CHD3-203ENST00000380358 CARHSP1Q9Y2V2 147 aaKnown RBP9.95□□□□□ -0.82
CHD3-203ENST00000380358 GBF1Q92538 1859 aa9.95□□□□□ -0.82
CHD3-203ENST00000380358 MARF1Q9Y4F3 1742 aaKnown RBP9.95□□□□□ -0.82
CHD3-203ENST00000380358 WISP3O95389 354 aaPredicted RBP9.94□□□□□ -0.82
CHD3-203ENST00000380358 TEX22C9J3V5 150 aa9.94□□□□□ -0.82
CHD3-203ENST00000380358 FOXE3Q13461 319 aa9.94□□□□□ -0.82
CHD3-203ENST00000380358 Q86TA4 180 aa9.94□□□□□ -0.82
CHD3-203ENST00000380358 UBE2CO00762 179 aa9.94□□□□□ -0.82
CHD3-203ENST00000380358 CNOT1A5YKK6 2376 aaKnown RBP9.94□□□□□ -0.82
CHD3-203ENST00000380358 FAM231BA6NCW3 169 aa9.93□□□□□ -0.82
CHD3-203ENST00000380358 DEFB112Q30KQ8 113 aa9.93□□□□□ -0.82
CHD3-203ENST00000380358 TMEM75Q8N9X5 138 aa9.93□□□□□ -0.82
CHD3-203ENST00000380358 GP9P14770 177 aa9.93□□□□□ -0.82
CHD3-203ENST00000380358 TPSG1Q9NRR2 321 aa9.93□□□□□ -0.82
CHD3-203ENST00000380358 IGKV3D-7A0A0C4DH55 119 aa9.93□□□□□ -0.82
CHD3-203ENST00000380358 A0A0J9YWU9 116 aa9.93□□□□□ -0.82
CHD3-203ENST00000380358 LINC01551Q86U37 167 aa9.93□□□□□ -0.82
CHD3-203ENST00000380358 TSSC4Q9Y5U2 329 aaPredicted RBP9.93□□□□□ -0.82
CHD3-203ENST00000380358 NDUFB1O75438 58 aa9.93□□□□□ -0.82
CHD3-203ENST00000380358 KLHDC3Q9BQ90 382 aa9.93□□□□□ -0.82
CHD3-203ENST00000380358 PTPRDP23468 1912 aa9.93□□□□□ -0.82
CHD3-203ENST00000380358 ADAMTSL3P82987 1691 aa9.92□□□□□ -0.82
CHD3-203ENST00000380358 IGHV2-70DA0A0C4DH43 119 aa9.92□□□□□ -0.82
CHD3-203ENST00000380358 ROS1P08922 2347 aa9.91□□□□□ -0.82
CHD3-203ENST00000380358 RETNQ9HD89 108 aa9.91□□□□□ -0.82
CHD3-203ENST00000380358 KLF2Q9Y5W3 355 aaPredicted RBP9.91□□□□□ -0.82
CHD3-203ENST00000380358 DIAPH2-AS1Q14236 149 aa9.91□□□□□ -0.82
CHD3-203ENST00000380358 CASC2Q6XLA1 102 aa9.91□□□□□ -0.82
CHD3-203ENST00000380358 PFN1P07737 140 aaKnown RBP9.91□□□□□ -0.82
CHD3-203ENST00000380358 MRPL51Q4U2R6 128 aaKnown RBP9.91□□□□□ -0.82
CHD3-203ENST00000380358 DAND5Q8N907 189 aa9.91□□□□□ -0.82
CHD3-203ENST00000380358 PKDREJQ9NTG1 2253 aa9.91□□□□□ -0.82
CHD3-203ENST00000380358 IFITM1P13164 125 aa9.91□□□□□ -0.82
CHD3-203ENST00000380358 HIST3H2BBQ8N257 126 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms