RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 OR10J3Q5JRS4 329 aa9.19□□□□□ -0.94
USP3-202ENST00000380324 SAPCD1Q5SSQ6 148 aa9.19□□□□□ -0.94
USP3-202ENST00000380324 IL17RELQ6ZVW7 336 aa9.19□□□□□ -0.94
USP3-202ENST00000380324 NPFFR1Q9GZQ6 430 aa9.19□□□□□ -0.94
USP3-202ENST00000380324 IGKV3-7A0A075B6H7 116 aa9.18□□□□□ -0.94
USP3-202ENST00000380324 PLA2G2AP14555 144 aa9.18□□□□□ -0.94
USP3-202ENST00000380324 CD33P20138 364 aa9.18□□□□□ -0.94
USP3-202ENST00000380324 PMCHP20382 165 aa9.18□□□□□ -0.94
USP3-202ENST00000380324 RPL11P62913 178 aaKnown RBP9.18□□□□□ -0.94
USP3-202ENST00000380324 ARL6IP6Q8N6S5 226 aa9.18□□□□□ -0.94
USP3-202ENST00000380324 WFDC11Q8NEX6 87 aa9.18□□□□□ -0.94
USP3-202ENST00000380324 C18orf32Q8TCD1 76 aa9.18□□□□□ -0.94
USP3-202ENST00000380324 C16orf92Q96LL3 132 aa9.18□□□□□ -0.94
USP3-202ENST00000380324 NDFIP1Q9BT67 221 aa9.18□□□□□ -0.94
USP3-202ENST00000380324 ITPR2Q14571 2701 aa9.18□□□□□ -0.94
USP3-202ENST00000380324 TMEM189A5PLL7 270 aa9.17□□□□□ -0.94
USP3-202ENST00000380324 PSMB8P28062 276 aa9.17□□□□□ -0.94
USP3-202ENST00000380324 FOXA3P55318 350 aaPredicted RBP9.17□□□□□ -0.94
USP3-202ENST00000380324 S100A12P80511 92 aa9.17□□□□□ -0.94
USP3-202ENST00000380324 KCNS1Q96KK3 526 aa9.17□□□□□ -0.94
USP3-202ENST00000380324 PRDM13Q9H4Q3 707 aa9.17□□□□□ -0.94
USP3-202ENST00000380324 A0A1B0GUT8 65 aa9.17□□□□□ -0.94
USP3-202ENST00000380324 A8MWP6 167 aa9.17□□□□□ -0.94
USP3-202ENST00000380324 EDN2P20800 178 aa9.17□□□□□ -0.94
USP3-202ENST00000380324 TM4SF20Q53R12 229 aa9.17□□□□□ -0.94
USP3-202ENST00000380324 Q6YL49 198 aa9.17□□□□□ -0.94
USP3-202ENST00000380324 MUC21A0A0G2JKD1 596 aa9.16□□□□□ -0.94
USP3-202ENST00000380324 MUC21A0A140T8X8 626 aa9.16□□□□□ -0.94
USP3-202ENST00000380324 FBLL1A6NHQ2 334 aaKnown RBP9.16□□□□□ -0.94
USP3-202ENST00000380324 LINC00587B1AMM8 73 aa9.16□□□□□ -0.94
USP3-202ENST00000380324 ESDP10768 282 aa9.16□□□□□ -0.94
USP3-202ENST00000380324 FAM209BQ5JX69 171 aa9.16□□□□□ -0.94
USP3-202ENST00000380324 MUC21Q5SSG8 566 aa9.16□□□□□ -0.94
USP3-202ENST00000380324 CYB5R2Q6BCY4 276 aa9.16□□□□□ -0.94
USP3-202ENST00000380324 RPLP1P05386 114 aaKnown RBP9.16□□□□□ -0.94
USP3-202ENST00000380324 ZNF705DP0CH99 300 aaPredicted RBP9.16□□□□□ -0.94
USP3-202ENST00000380324 ZNF705BP0CI00 300 aaPredicted RBP9.16□□□□□ -0.94
USP3-202ENST00000380324 AMTP48728 403 aa9.16□□□□□ -0.94
USP3-202ENST00000380324 C9orf139Q6ZV77 190 aa9.16□□□□□ -0.94
USP3-202ENST00000380324 Q6ZWC4 215 aa9.16□□□□□ -0.94
USP3-202ENST00000380324 ALKBH7Q9BT30 221 aaPredicted RBP9.16□□□□□ -0.94
USP3-202ENST00000380324 DAZ1Q9NQZ3 744 aaKnown RBP9.16□□□□□ -0.94
USP3-202ENST00000380324 PEF1Q9UBV8 284 aaKnown RBP9.16□□□□□ -0.94
USP3-202ENST00000380324 ACANP16112 2415 aa9.15□□□□□ -0.94
USP3-202ENST00000380324 J3QKU1 62 aa9.15□□□□□ -0.94
USP3-202ENST00000380324 HAX1O00165 279 aa9.15□□□□□ -0.94
USP3-202ENST00000380324 SCGB1D1O95968 90 aa9.15□□□□□ -0.94
USP3-202ENST00000380324 TMEM78Q5T7P6 136 aa9.15□□□□□ -0.94
USP3-202ENST00000380324 GPHB5Q86YW7 130 aa9.15□□□□□ -0.94
USP3-202ENST00000380324 ZNF738Q8NE65 137 aa9.15□□□□□ -0.94
USP3-202ENST00000380324 AGPAT4-IT1Q9H0P7 198 aa9.15□□□□□ -0.94
USP3-202ENST00000380324 CUBNO60494 3623 aa9.15□□□□□ -0.94
USP3-202ENST00000380324 A0A1W2PS18 150 aa9.15□□□□□ -0.95
USP3-202ENST00000380324 ORM1P02763 201 aa9.15□□□□□ -0.95
USP3-202ENST00000380324 NTF3P20783 257 aa9.15□□□□□ -0.95
USP3-202ENST00000380324 DEFB1P60022 68 aa9.15□□□□□ -0.95
USP3-202ENST00000380324 PAFAH1B2P68402 229 aa9.15□□□□□ -0.95
USP3-202ENST00000380324 RNASEKQ6P5S7 137 aaKnown RBP9.15□□□□□ -0.95
USP3-202ENST00000380324 COX8CQ7Z4L0 72 aa9.15□□□□□ -0.95
USP3-202ENST00000380324 FAM19A2Q8N3H0 131 aa9.15□□□□□ -0.95
USP3-202ENST00000380324 SIGLECL1Q8N7X8 197 aa9.15□□□□□ -0.95
USP3-202ENST00000380324 BORCS7Q96B45 105 aa9.15□□□□□ -0.95
USP3-202ENST00000380324 C20orf173Q96LM9 149 aa9.15□□□□□ -0.95
USP3-202ENST00000380324 RHPN1-AS1Q9BWJ2 59 aa9.15□□□□□ -0.95
USP3-202ENST00000380324 ZNF702PQ9H963 129 aa9.15□□□□□ -0.95
USP3-202ENST00000380324 ZNF580Q9UK33 172 aa9.15□□□□□ -0.95
USP3-202ENST00000380324 RBAKDNA6NC62 111 aa9.14□□□□□ -0.95
USP3-202ENST00000380324 M0QZ24 198 aa9.14□□□□□ -0.95
USP3-202ENST00000380324 SRD5A1P18405 259 aa9.14□□□□□ -0.95
USP3-202ENST00000380324 BMI1P35226 326 aa9.14□□□□□ -0.95
USP3-202ENST00000380324 Q6AWC8 147 aa9.14□□□□□ -0.95
USP3-202ENST00000380324 LYZL1Q6UWQ5 148 aa9.14□□□□□ -0.95
USP3-202ENST00000380324 PRSS57Q6UWY2 283 aa9.14□□□□□ -0.95
USP3-202ENST00000380324 PRO1933Q9H354 126 aa9.14□□□□□ -0.95
USP3-202ENST00000380324 IGHV7-4-1A0A0J9YVY3 117 aa9.14□□□□□ -0.95
USP3-202ENST00000380324 ZNF324O75467 553 aaPredicted RBP9.14□□□□□ -0.95
USP3-202ENST00000380324 RIGQ13278 110 aa9.14□□□□□ -0.95
USP3-202ENST00000380324 PDZD2O15018 2839 aa9.14□□□□□ -0.95
USP3-202ENST00000380324 LOC102724200A0A096LPH7 203 aaPredicted RBP9.13□□□□□ -0.95
USP3-202ENST00000380324 TMEM213A2RRL7 107 aa9.13□□□□□ -0.95
USP3-202ENST00000380324 FAM181BA6NEQ2 426 aa9.13□□□□□ -0.95
USP3-202ENST00000380324 GPX1P07203 203 aa9.13□□□□□ -0.95
USP3-202ENST00000380324 ZNF138P52744 262 aa9.13□□□□□ -0.95
USP3-202ENST00000380324 MRPL53Q96EL3 112 aaKnown RBP9.13□□□□□ -0.95
USP3-202ENST00000380324 PSMG3-AS1Q96PY0 264 aa9.13□□□□□ -0.95
USP3-202ENST00000380324 NRN1Q9NPD7 142 aa9.13□□□□□ -0.95
USP3-202ENST00000380324 RNF114Q9Y508 228 aa9.13□□□□□ -0.95
USP3-202ENST00000380324 UNC79Q9P2D8 2635 aa9.13□□□□□ -0.95
USP3-202ENST00000380324 J3KRW8 73 aa9.13□□□□□ -0.95
USP3-202ENST00000380324 DNLZQ5SXM8 178 aa9.13□□□□□ -0.95
USP3-202ENST00000380324 FABP5P3A8MUU1 101 aa9.12□□□□□ -0.95
USP3-202ENST00000380324 HSBP1O75506 76 aa9.12□□□□□ -0.95
USP3-202ENST00000380324 KRTDAPP60985 99 aa9.12□□□□□ -0.95
USP3-202ENST00000380324 KLF5Q13887 457 aaPredicted RBP9.12□□□□□ -0.95
USP3-202ENST00000380324 FAM106AQ4KMX7 169 aa9.12□□□□□ -0.95
USP3-202ENST00000380324 FER1L6-AS1Q8NA97 138 aa9.12□□□□□ -0.95
USP3-202ENST00000380324 NAGKQ9UJ70 344 aa9.12□□□□□ -0.95
USP3-202ENST00000380324 GCN1Q92616 2671 aaKnown RBP9.12□□□□□ -0.95
USP3-202ENST00000380324 SOCS3O14543 225 aa9.11□□□□□ -0.95
USP3-202ENST00000380324 FOXE3Q13461 319 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms