RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 SMPXQ9UHP9 88 aa15.1■□□□□ 0.01
PDLIM5-205ENST00000380180 FAM231BA6NCW3 169 aa15.1■□□□□ 0.01
PDLIM5-205ENST00000380180 EDN2P20800 178 aa15.1■□□□□ 0.01
PDLIM5-205ENST00000380180 MRPL53Q96EL3 112 aaKnown RBP15.1■□□□□ 0.01
PDLIM5-205ENST00000380180 PGLYRP4Q96LB8 373 aa15.1■□□□□ 0.01
PDLIM5-205ENST00000380180 HLA-DQA1P01909 254 aa15.09■□□□□ 0.01
PDLIM5-205ENST00000380180 LGALS1P09382 135 aaKnown RBP15.09■□□□□ 0.01
PDLIM5-205ENST00000380180 RPL11P62913 178 aaKnown RBP15.09■□□□□ 0.01
PDLIM5-205ENST00000380180 RBPMS2Q6ZRY4 209 aaKnown RBP15.09■□□□□ 0.01
PDLIM5-205ENST00000380180 CLEC5AQ9NY25 188 aa15.09■□□□□ 0.01
PDLIM5-205ENST00000380180 AKAP9Q99996 3911 aa15.09■□□□□ 0.01
PDLIM5-205ENST00000380180 FAM181BA6NEQ2 426 aa15.09■□□□□ 0.01
PDLIM5-205ENST00000380180 DNAJC9-AS1A6NH13 148 aa15.09■□□□□ 0.01
PDLIM5-205ENST00000380180 GRIFINA4D1Z8 144 aa15.08■□□□□ 0
PDLIM5-205ENST00000380180 FAM162BQ5T6X4 162 aa15.08■□□□□ 0
PDLIM5-205ENST00000380180 GDF5OSQ5U4N7 250 aa15.08■□□□□ 0
PDLIM5-205ENST00000380180 ATP5L2Q7Z4Y8 100 aa15.08■□□□□ 0
PDLIM5-205ENST00000380180 C20orf173Q96LM9 149 aa15.08■□□□□ 0
PDLIM5-205ENST00000380180 AGPAT4-IT1Q9H0P7 198 aa15.08■□□□□ 0
PDLIM5-205ENST00000380180 SELENOKQ9Y6D0 94 aa15.08■□□□□ 0
PDLIM5-205ENST00000380180 A0A1B0GXF2 115 aa15.07■□□□□ 0
PDLIM5-205ENST00000380180 SOCS3O14543 225 aa15.07■□□□□ 0
PDLIM5-205ENST00000380180 SH2D1AO60880 128 aa15.07■□□□□ 0
PDLIM5-205ENST00000380180 S100A2P29034 98 aa15.07■□□□□ 0
PDLIM5-205ENST00000380180 CAMPP49913 170 aa15.07■□□□□ 0
PDLIM5-205ENST00000380180 ZNF80P51504 273 aaPredicted RBP15.07■□□□□ 0
PDLIM5-205ENST00000380180 FOXA3P55318 350 aaPredicted RBP15.07■□□□□ 0
PDLIM5-205ENST00000380180 KIAA1644Q3SXP7 199 aa15.07■□□□□ 0
PDLIM5-205ENST00000380180 KLHDC1Q8N7A1 406 aa15.07■□□□□ 0
PDLIM5-205ENST00000380180 NDFIP1Q9BT67 221 aa15.07■□□□□ 0
PDLIM5-205ENST00000380180 NRN1Q9NPD7 142 aa15.07■□□□□ 0
PDLIM5-205ENST00000380180 UFC1Q9Y3C8 167 aa15.07■□□□□ 0
PDLIM5-205ENST00000380180 IGHV4OR15-8A0A075B7B6 117 aa15.07■□□□□ 0
PDLIM5-205ENST00000380180 A0A087WW49 117 aa15.07■□□□□ 0
PDLIM5-205ENST00000380180 C12orf57Q99622 126 aa15.07■□□□□ 0
PDLIM5-205ENST00000380180 ESM1Q9NQ30 184 aa15.07■□□□□ 0
PDLIM5-205ENST00000380180 IGKV3-7A0A075B6H7 116 aa15.06■□□□□ 0
PDLIM5-205ENST00000380180 A0A1B0GUS0 222 aa15.06■□□□□ 0
PDLIM5-205ENST00000380180 FABP4P15090 132 aa15.06■□□□□ 0
PDLIM5-205ENST00000380180 CRISP2P16562 243 aa15.06■□□□□ 0
PDLIM5-205ENST00000380180 APCSP02743 223 aa15.05■□□□□ 0
PDLIM5-205ENST00000380180 SLAQ13239 276 aa15.05■□□□□ 0
PDLIM5-205ENST00000380180 Q6ZSV7 163 aa15.05■□□□□ 0
PDLIM5-205ENST00000380180 HIST1H2BLQ99880 126 aa15.05■□□□□ 0
PDLIM5-205ENST00000380180 TMEM213A2RRL7 107 aa15.05■□□□□ -0
PDLIM5-205ENST00000380180 HBBP68871 147 aa15.05■□□□□ -0
PDLIM5-205ENST00000380180 TMEM78Q5T7P6 136 aa15.05■□□□□ -0
PDLIM5-205ENST00000380180 C9orf47Q6ZRZ4 202 aa15.05■□□□□ -0
PDLIM5-205ENST00000380180 ZNF738Q8NE65 137 aa15.05■□□□□ -0
PDLIM5-205ENST00000380180 TMEM189A5PLL7 270 aa15.04■□□□□ -0
PDLIM5-205ENST00000380180 BMI1P35226 326 aa15.04■□□□□ -0
PDLIM5-205ENST00000380180 TMEM256Q8N2U0 113 aa15.04■□□□□ -0
PDLIM5-205ENST00000380180 OR10D4PQ8NGN7 298 aa15.04■□□□□ -0
PDLIM5-205ENST00000380180 SRD5A1P18405 259 aa15.04■□□□□ -0
PDLIM5-205ENST00000380180 ZNF138P52744 262 aa15.04■□□□□ -0
PDLIM5-205ENST00000380180 SYNJ2BPP57105 145 aa15.04■□□□□ -0
PDLIM5-205ENST00000380180 C18orf65Q6ZTR6 163 aa15.04■□□□□ -0
PDLIM5-205ENST00000380180 SSBP4Q9BWG4 385 aaPredicted RBP15.04■□□□□ -0
PDLIM5-205ENST00000380180 TMSB15BA0A087X1C1 80 aa15.03■□□□□ -0
PDLIM5-205ENST00000380180 A8MWP6 167 aa15.03■□□□□ -0
PDLIM5-205ENST00000380180 ZNF705DP0CH99 300 aaPredicted RBP15.03■□□□□ -0
PDLIM5-205ENST00000380180 ZNF705BP0CI00 300 aaPredicted RBP15.03■□□□□ -0
PDLIM5-205ENST00000380180 HOXD3P31249 432 aaPredicted RBP15.03■□□□□ -0
PDLIM5-205ENST00000380180 TP53TG3Q9ULZ0 132 aa15.03■□□□□ -0
PDLIM5-205ENST00000380180 NF1P21359 2839 aa15.02■□□□□ -0
PDLIM5-205ENST00000380180 SMIM6P0DI80 62 aa15.02■□□□□ -0
PDLIM5-205ENST00000380180 REC114Q7Z4M0 266 aa15.02■□□□□ -0
PDLIM5-205ENST00000380180 FABP5P3A8MUU1 101 aa15.02□□□□□ -0.01
PDLIM5-205ENST00000380180 LGALS9O00182 355 aa15.02□□□□□ -0.01
PDLIM5-205ENST00000380180 NUPR1O60356 82 aa15.02□□□□□ -0.01
PDLIM5-205ENST00000380180 AMBPP02760 352 aa15.02□□□□□ -0.01
PDLIM5-205ENST00000380180 TCTEX1D4Q5JR98 221 aa15.02□□□□□ -0.01
PDLIM5-205ENST00000380180 MTORP42345 2549 aa15.01□□□□□ -0.01
PDLIM5-205ENST00000380180 HAX1O00165 279 aa15.01□□□□□ -0.01
PDLIM5-205ENST00000380180 SRIP30626 198 aa15.01□□□□□ -0.01
PDLIM5-205ENST00000380180 Q0VG73 95 aa15.01□□□□□ -0.01
PDLIM5-205ENST00000380180 PPP1R14DQ9NXH3 145 aa15.01□□□□□ -0.01
PDLIM5-205ENST00000380180 CUBNO60494 3623 aa15.01□□□□□ -0.01
PDLIM5-205ENST00000380180 A0A1B0GUT8 65 aa15□□□□□ -0.01
PDLIM5-205ENST00000380180 ARMS2P0C7Q2 107 aa15□□□□□ -0.01
PDLIM5-205ENST00000380180 PRR31Q5SQ13 230 aa15□□□□□ -0.01
PDLIM5-205ENST00000380180 PACRGQ96M98 296 aaPredicted RBP15□□□□□ -0.01
PDLIM5-205ENST00000380180 F2Z2F3 143 aa15□□□□□ -0.01
PDLIM5-205ENST00000380180 OVOL1O14753 267 aa15□□□□□ -0.01
PDLIM5-205ENST00000380180 DEFB1P60022 68 aa15□□□□□ -0.01
PDLIM5-205ENST00000380180 DEFB136Q30KP8 78 aa15□□□□□ -0.01
PDLIM5-205ENST00000380180 ZNF575Q86XF7 245 aa15□□□□□ -0.01
PDLIM5-205ENST00000380180 SMR3AQ99954 134 aa15□□□□□ -0.01
PDLIM5-205ENST00000380180 TPPP3Q9BW30 176 aa15□□□□□ -0.01
PDLIM5-205ENST00000380180 Q6AWC8 147 aa14.99□□□□□ -0.01
PDLIM5-205ENST00000380180 DCANP1Q8TF63 244 aa14.99□□□□□ -0.01
PDLIM5-205ENST00000380180 ORM1P02763 201 aa14.99□□□□□ -0.01
PDLIM5-205ENST00000380180 BAGE3Q86Y29 109 aa14.99□□□□□ -0.01
PDLIM5-205ENST00000380180 LINC00310P59036 64 aa14.98□□□□□ -0.01
PDLIM5-205ENST00000380180 SRSF2Q01130 221 aaKnown RBP14.98□□□□□ -0.01
PDLIM5-205ENST00000380180 KLF5Q13887 457 aaPredicted RBP14.98□□□□□ -0.01
PDLIM5-205ENST00000380180 LYZL1Q6UWQ5 148 aa14.98□□□□□ -0.01
PDLIM5-205ENST00000380180 WFDC3Q8IUB2 231 aa14.98□□□□□ -0.01
PDLIM5-205ENST00000380180 OR10J6PQ8NGY7 276 aa14.98□□□□□ -0.01
PDLIM5-205ENST00000380180 LINC00477Q96M19 166 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms