RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 LY6G5BQ8NDX9 201 aa8.52□□□□□ -1.04
NEDD9-201ENST00000379433 SLC25A2Q9BXI2 301 aa8.52□□□□□ -1.04
NEDD9-201ENST00000379433 FLNAP21333 2647 aaKnown RBP8.52□□□□□ -1.05
NEDD9-201ENST00000379433 TRAV8-1A0A0A6YYK1 113 aa8.52□□□□□ -1.05
NEDD9-201ENST00000379433 LOC107984640A0A0U1RRK4 108 aa8.52□□□□□ -1.05
NEDD9-201ENST00000379433 PGPA6NDG6 321 aa8.52□□□□□ -1.05
NEDD9-201ENST00000379433 ACTL10Q5JWF8 245 aa8.52□□□□□ -1.05
NEDD9-201ENST00000379433 FAM162BQ5T6X4 162 aa8.52□□□□□ -1.05
NEDD9-201ENST00000379433 OR2T10Q8NGZ9 312 aa8.52□□□□□ -1.05
NEDD9-201ENST00000379433 DNAJC30Q96LL9 226 aa8.52□□□□□ -1.05
NEDD9-201ENST00000379433 IMMP2LQ96T52 175 aa8.52□□□□□ -1.05
NEDD9-201ENST00000379433 F11RQ9Y624 299 aaKnown RBP8.52□□□□□ -1.05
NEDD9-201ENST00000379433 LMO4P61968 165 aa8.52□□□□□ -1.05
NEDD9-201ENST00000379433 IGFL4Q6B9Z1 124 aa8.52□□□□□ -1.05
NEDD9-201ENST00000379433 EXOC3-AS1Q8N2X6 119 aa8.52□□□□□ -1.05
NEDD9-201ENST00000379433 OR4A5Q8NH83 315 aa8.52□□□□□ -1.05
NEDD9-201ENST00000379433 OR4C46A6NHA9 309 aa8.51□□□□□ -1.05
NEDD9-201ENST00000379433 HYPMO75409 117 aa8.51□□□□□ -1.05
NEDD9-201ENST00000379433 C17orf77Q96MU5 243 aa8.51□□□□□ -1.05
NEDD9-201ENST00000379433 HSPB9Q9BQS6 159 aa8.51□□□□□ -1.05
NEDD9-201ENST00000379433 LY6LH3BQJ8 138 aa8.51□□□□□ -1.05
NEDD9-201ENST00000379433 IGLC1P0CG04 106 aa8.51□□□□□ -1.05
NEDD9-201ENST00000379433 C4orf26Q17RF5 130 aa8.51□□□□□ -1.05
NEDD9-201ENST00000379433 RASL11AQ6T310 242 aa8.51□□□□□ -1.05
NEDD9-201ENST00000379433 LCNL1Q6ZST4 164 aa8.51□□□□□ -1.05
NEDD9-201ENST00000379433 ARPC1AQ92747 370 aa8.51□□□□□ -1.05
NEDD9-201ENST00000379433 OR11H6Q8NGC7 330 aa8.51□□□□□ -1.05
NEDD9-201ENST00000379433 TMEM78Q5T7P6 136 aa8.5□□□□□ -1.05
NEDD9-201ENST00000379433 MRPL54Q6P161 138 aaKnown RBP8.5□□□□□ -1.05
NEDD9-201ENST00000379433 C8orf31Q8N9H6 132 aa8.5□□□□□ -1.05
NEDD9-201ENST00000379433 OR10G8Q8NGN5 311 aa8.5□□□□□ -1.05
NEDD9-201ENST00000379433 VN1R17PQ8TDU5 208 aa8.5□□□□□ -1.05
NEDD9-201ENST00000379433 C7orf69Q9H7B7 122 aa8.5□□□□□ -1.05
NEDD9-201ENST00000379433 ZMAT4Q9H898 229 aa8.5□□□□□ -1.05
NEDD9-201ENST00000379433 TMEM167BQ9NRX6 74 aa8.5□□□□□ -1.05
NEDD9-201ENST00000379433 APCP25054 2843 aa8.5□□□□□ -1.05
NEDD9-201ENST00000379433 ITPR3Q14573 2671 aa8.5□□□□□ -1.05
NEDD9-201ENST00000379433 A0A087WWC5 75 aa8.5□□□□□ -1.05
NEDD9-201ENST00000379433 TEX48A0A1B0GUV7 120 aa8.5□□□□□ -1.05
NEDD9-201ENST00000379433 M0R1W7 72 aa8.5□□□□□ -1.05
NEDD9-201ENST00000379433 IGHV4-38-2P0DP08 117 aa8.5□□□□□ -1.05
NEDD9-201ENST00000379433 IGKV3-7A0A075B6H7 116 aa8.49□□□□□ -1.05
NEDD9-201ENST00000379433 GRIFINA4D1Z8 144 aa8.49□□□□□ -1.05
NEDD9-201ENST00000379433 ISLRO14498 428 aa8.49□□□□□ -1.05
NEDD9-201ENST00000379433 CBLN1P23435 193 aa8.49□□□□□ -1.05
NEDD9-201ENST00000379433 Q71RC1 249 aaPredicted RBP8.49□□□□□ -1.05
NEDD9-201ENST00000379433 FAM167A-AS1Q96KT0 104 aa8.49□□□□□ -1.05
NEDD9-201ENST00000379433 CCDC179H3BU77 68 aa8.49□□□□□ -1.05
NEDD9-201ENST00000379433 FAM106CPP0CH98 169 aa8.49□□□□□ -1.05
NEDD9-201ENST00000379433 GPR183P32249 361 aa8.49□□□□□ -1.05
NEDD9-201ENST00000379433 SRP14P37108 136 aaKnown RBP8.49□□□□□ -1.05
NEDD9-201ENST00000379433 DGAT2L7PQ6IED9 249 aa8.49□□□□□ -1.05
NEDD9-201ENST00000379433 ZC2HC1AQ96GY0 325 aa8.49□□□□□ -1.05
NEDD9-201ENST00000379433 AMY1AP04745 511 aa8.49□□□□□ -1.05
NEDD9-201ENST00000379433 NEGR1Q7Z3B1 354 aa8.49□□□□□ -1.05
NEDD9-201ENST00000379433 YPEL4Q96NS1 127 aa8.49□□□□□ -1.05
NEDD9-201ENST00000379433 HIGD1AQ9Y241 93 aa8.49□□□□□ -1.05
NEDD9-201ENST00000379433 CT45A10P0DMU9 189 aa8.48□□□□□ -1.05
NEDD9-201ENST00000379433 IER3P46695 156 aa8.48□□□□□ -1.05
NEDD9-201ENST00000379433 RPL15P61313 204 aaKnown RBP8.48□□□□□ -1.05
NEDD9-201ENST00000379433 UBE2G1P62253 170 aa8.48□□□□□ -1.05
NEDD9-201ENST00000379433 CYSLTR1Q9Y271 337 aa8.48□□□□□ -1.05
NEDD9-201ENST00000379433 K7EIM0 57 aa8.48□□□□□ -1.05
NEDD9-201ENST00000379433 ATP6V0E1O15342 81 aa8.48□□□□□ -1.05
NEDD9-201ENST00000379433 IGKV1-17P01599 117 aa8.48□□□□□ -1.05
NEDD9-201ENST00000379433 PPIFP30405 207 aaKnown RBP8.48□□□□□ -1.05
NEDD9-201ENST00000379433 BAGE2Q86Y30 109 aa8.48□□□□□ -1.05
NEDD9-201ENST00000379433 ZNF469Q96JG9 3925 aaPredicted RBP8.48□□□□□ -1.05
NEDD9-201ENST00000379433 M0R3E3 92 aa8.47□□□□□ -1.05
NEDD9-201ENST00000379433 NPFFO15130 113 aa8.47□□□□□ -1.05
NEDD9-201ENST00000379433 PFN1P07737 140 aaKnown RBP8.47□□□□□ -1.05
NEDD9-201ENST00000379433 FBXL7Q9UJT9 491 aa8.47□□□□□ -1.05
NEDD9-201ENST00000379433 TENM4Q6N022 2769 aa8.47□□□□□ -1.05
NEDD9-201ENST00000379433 ODF3BA8MYP8 253 aa8.47□□□□□ -1.05
NEDD9-201ENST00000379433 SPATA45Q537H7 98 aa8.47□□□□□ -1.05
NEDD9-201ENST00000379433 SPATA25Q9BR10 227 aa8.47□□□□□ -1.05
NEDD9-201ENST00000379433 TRAPPC1Q9Y5R8 145 aa8.47□□□□□ -1.05
NEDD9-201ENST00000379433 IGHV3-11P01762 117 aa8.47□□□□□ -1.05
NEDD9-201ENST00000379433 KRTAP10-9P60411 292 aa8.47□□□□□ -1.05
NEDD9-201ENST00000379433 GOLT1AQ6ZVE7 132 aa8.47□□□□□ -1.05
NEDD9-201ENST00000379433 SLC25A39Q9BZJ4 359 aaPredicted RBP8.47□□□□□ -1.05
NEDD9-201ENST00000379433 I3L2K1 104 aa8.46□□□□□ -1.05
NEDD9-201ENST00000379433 TAX1BP3O14907 124 aa8.46□□□□□ -1.05
NEDD9-201ENST00000379433 C15orf32Q32M92 178 aa8.46□□□□□ -1.05
NEDD9-201ENST00000379433 PRNTQ86SH4 94 aa8.46□□□□□ -1.05
NEDD9-201ENST00000379433 OR4B1Q8NGF8 309 aa8.46□□□□□ -1.05
NEDD9-201ENST00000379433 CMTM2Q8TAZ6 248 aa8.46□□□□□ -1.05
NEDD9-201ENST00000379433 FXYD5Q96DB9 178 aa8.46□□□□□ -1.05
NEDD9-201ENST00000379433 FLNBO75369 2602 aaKnown RBP8.46□□□□□ -1.06
NEDD9-201ENST00000379433 IGHV7-81A0A0B4J1V7 117 aa8.46□□□□□ -1.06
NEDD9-201ENST00000379433 CLEC19AQ6UXS0 136 aa8.46□□□□□ -1.06
NEDD9-201ENST00000379433 EDA2RQ9HAV5 297 aa8.46□□□□□ -1.06
NEDD9-201ENST00000379433 MUC21A0A0G2JKD1 596 aa8.46□□□□□ -1.06
NEDD9-201ENST00000379433 MUC21A0A140T8X8 626 aa8.46□□□□□ -1.06
NEDD9-201ENST00000379433 CD99P14209 185 aa8.46□□□□□ -1.06
NEDD9-201ENST00000379433 UBE2E1P51965 193 aa8.46□□□□□ -1.06
NEDD9-201ENST00000379433 RPEL1Q2QD12 228 aa8.46□□□□□ -1.06
NEDD9-201ENST00000379433 MEIG1Q5JSS6 88 aa8.46□□□□□ -1.06
NEDD9-201ENST00000379433 MUC21Q5SSG8 566 aa8.46□□□□□ -1.06
NEDD9-201ENST00000379433 IBA57Q5T440 356 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms