RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 NFE4Q86UQ8 179 aa12.11□□□□□ -0.47
PDLIM4-202ENST00000379018 ZNF680Q8NEM1 530 aa12.11□□□□□ -0.47
PDLIM4-202ENST00000379018 KLF12Q9Y4X4 402 aa12.11□□□□□ -0.47
PDLIM4-202ENST00000379018 C7orf71A4D174 169 aa12.1□□□□□ -0.47
PDLIM4-202ENST00000379018 H3BQ15 152 aa12.1□□□□□ -0.47
PDLIM4-202ENST00000379018 BTN1A1Q13410 526 aa12.1□□□□□ -0.47
PDLIM4-202ENST00000379018 C10orf113Q5VZT2 155 aa12.1□□□□□ -0.47
PDLIM4-202ENST00000379018 C11orf72Q8NBR9 251 aa12.1□□□□□ -0.47
PDLIM4-202ENST00000379018 SMIM8Q96KF7 97 aa12.1□□□□□ -0.47
PDLIM4-202ENST00000379018 SLC25A21Q9BQT8 299 aaPredicted RBP12.1□□□□□ -0.47
PDLIM4-202ENST00000379018 MRPL16Q9NX20 251 aaKnown RBP12.1□□□□□ -0.47
PDLIM4-202ENST00000379018 TRAV5A0A0B4J249 113 aa12.09□□□□□ -0.47
PDLIM4-202ENST00000379018 NPIPB6E9PJ23 425 aa12.09□□□□□ -0.47
PDLIM4-202ENST00000379018 J3QL48 77 aa12.09□□□□□ -0.47
PDLIM4-202ENST00000379018 GCSHP23434 173 aa12.09□□□□□ -0.47
PDLIM4-202ENST00000379018 PXDC1Q5TGL8 231 aa12.09□□□□□ -0.47
PDLIM4-202ENST00000379018 TMEM14EPQ6UXP3 125 aa12.09□□□□□ -0.47
PDLIM4-202ENST00000379018 TMEM37Q8WXS4 190 aa12.09□□□□□ -0.47
PDLIM4-202ENST00000379018 C8orf49Q96NF6 230 aa12.09□□□□□ -0.47
PDLIM4-202ENST00000379018 ODF3Q96PU9 254 aa12.09□□□□□ -0.47
PDLIM4-202ENST00000379018 FAM229AH3BQW9 127 aa12.08□□□□□ -0.48
PDLIM4-202ENST00000379018 K7EPK0 472 aa12.08□□□□□ -0.48
PDLIM4-202ENST00000379018 ZNF324O75467 553 aaPredicted RBP12.08□□□□□ -0.48
PDLIM4-202ENST00000379018 IGLC2P0DOY2 106 aa12.08□□□□□ -0.48
PDLIM4-202ENST00000379018 RNASE4P34096 147 aaKnown RBP12.08□□□□□ -0.48
PDLIM4-202ENST00000379018 Q6ZSN1 163 aa12.08□□□□□ -0.48
PDLIM4-202ENST00000379018 EIF4E3Q8N5X7 224 aaKnown RBP12.08□□□□□ -0.48
PDLIM4-202ENST00000379018 HYLS1Q96M11 299 aa12.08□□□□□ -0.48
PDLIM4-202ENST00000379018 MGST2Q99735 147 aa12.08□□□□□ -0.48
PDLIM4-202ENST00000379018 MED28Q9H204 178 aa12.08□□□□□ -0.48
PDLIM4-202ENST00000379018 LY96Q9Y6Y9 160 aa12.08□□□□□ -0.48
PDLIM4-202ENST00000379018 SRRM2Q9UQ35 2752 aaKnown RBP12.08□□□□□ -0.48
PDLIM4-202ENST00000379018 C9orf170A2RU37 121 aa12.07□□□□□ -0.48
PDLIM4-202ENST00000379018 SLC25A5P05141 298 aaKnown RBP12.07□□□□□ -0.48
PDLIM4-202ENST00000379018 ARL16Q0P5N6 197 aa12.07□□□□□ -0.48
PDLIM4-202ENST00000379018 NDUFA5Q16718 116 aa12.07□□□□□ -0.48
PDLIM4-202ENST00000379018 LYPD5Q6UWN5 251 aa12.07□□□□□ -0.48
PDLIM4-202ENST00000379018 SAT2Q96F10 170 aaPredicted RBP12.07□□□□□ -0.48
PDLIM4-202ENST00000379018 FAM210AQ96ND0 272 aa12.07□□□□□ -0.48
PDLIM4-202ENST00000379018 LINC00467Q9BRT7 94 aa12.07□□□□□ -0.48
PDLIM4-202ENST00000379018 MSRB1Q9NZV6 116 aa12.07□□□□□ -0.48
PDLIM4-202ENST00000379018 TP53TG3Q9ULZ0 132 aa12.07□□□□□ -0.48
PDLIM4-202ENST00000379018 TRAV9-2A0A087WT02 112 aa12.06□□□□□ -0.48
PDLIM4-202ENST00000379018 FNDC10F2Z333 226 aa12.06□□□□□ -0.48
PDLIM4-202ENST00000379018 M0R3E3 92 aa12.06□□□□□ -0.48
PDLIM4-202ENST00000379018 SPINK4O60575 86 aa12.06□□□□□ -0.48
PDLIM4-202ENST00000379018 TCL1AP56279 114 aa12.06□□□□□ -0.48
PDLIM4-202ENST00000379018 WFDC10BQ8IUB3 73 aa12.06□□□□□ -0.48
PDLIM4-202ENST00000379018 GPN1Q9HCN4 374 aaPredicted RBP12.06□□□□□ -0.48
PDLIM4-202ENST00000379018 GSKIPQ9P0R6 139 aa12.06□□□□□ -0.48
PDLIM4-202ENST00000379018 PRO0255Q9UI72 69 aa12.06□□□□□ -0.48
PDLIM4-202ENST00000379018 E5RGE8 158 aa12.05□□□□□ -0.48
PDLIM4-202ENST00000379018 MRPL23Q16540 153 aaKnown RBP12.05□□□□□ -0.48
PDLIM4-202ENST00000379018 MIC13Q5XKP0 118 aa12.05□□□□□ -0.48
PDLIM4-202ENST00000379018 FLVCR2Q9UPI3 526 aa12.05□□□□□ -0.48
PDLIM4-202ENST00000379018 HHLA3Q9XRX5 114 aa12.05□□□□□ -0.48
PDLIM4-202ENST00000379018 TRAV6A0A075B6T7 132 aa12.04□□□□□ -0.48
PDLIM4-202ENST00000379018 IGLV5-52A0A0A0MRZ9 124 aa12.04□□□□□ -0.48
PDLIM4-202ENST00000379018 MPDU1O75352 247 aa12.04□□□□□ -0.48
PDLIM4-202ENST00000379018 OR4E1P0C645 316 aa12.04□□□□□ -0.48
PDLIM4-202ENST00000379018 CAMLGP49069 296 aa12.04□□□□□ -0.48
PDLIM4-202ENST00000379018 CRYBA4P53673 196 aa12.04□□□□□ -0.48
PDLIM4-202ENST00000379018 IAH1Q2TAA2 248 aaPredicted RBP12.04□□□□□ -0.48
PDLIM4-202ENST00000379018 NEGR1Q7Z3B1 354 aa12.04□□□□□ -0.48
PDLIM4-202ENST00000379018 ARPC5LQ9BPX5 153 aa12.04□□□□□ -0.48
PDLIM4-202ENST00000379018 DNAJC4Q9NNZ3 241 aa12.04□□□□□ -0.48
PDLIM4-202ENST00000379018 RCL1Q9Y2P8 373 aaKnown RBP12.04□□□□□ -0.48
PDLIM4-202ENST00000379018 TRGV4A0A0C4DH28 118 aa12.03□□□□□ -0.48
PDLIM4-202ENST00000379018 TSC22D2O75157 780 aa12.03□□□□□ -0.48
PDLIM4-202ENST00000379018 GPX1P07203 203 aa12.03□□□□□ -0.48
PDLIM4-202ENST00000379018 EVI2AP22794 236 aa12.03□□□□□ -0.48
PDLIM4-202ENST00000379018 SRIP30626 198 aa12.03□□□□□ -0.48
PDLIM4-202ENST00000379018 IFITM2Q01629 132 aa12.03□□□□□ -0.48
PDLIM4-202ENST00000379018 GUK1Q16774 197 aa12.03□□□□□ -0.48
PDLIM4-202ENST00000379018 ANXA2RQ3ZCQ2 193 aa12.03□□□□□ -0.48
PDLIM4-202ENST00000379018 Q6ZQT7 251 aa12.03□□□□□ -0.48
PDLIM4-202ENST00000379018 Q6ZRG5 221 aa12.03□□□□□ -0.48
PDLIM4-202ENST00000379018 KLLNB2CW77 178 aa12.02□□□□□ -0.49
PDLIM4-202ENST00000379018 PSCAO43653 123 aa12.02□□□□□ -0.49
PDLIM4-202ENST00000379018 GIPP09681 153 aaPredicted RBP12.02□□□□□ -0.49
PDLIM4-202ENST00000379018 SFTA3P0C7M3 94 aa12.02□□□□□ -0.49
PDLIM4-202ENST00000379018 UBE2MP61081 183 aaKnown RBP12.02□□□□□ -0.49
PDLIM4-202ENST00000379018 ZNF415Q09FC8 603 aa12.02□□□□□ -0.49
PDLIM4-202ENST00000379018 FHL2Q14192 279 aa12.02□□□□□ -0.49
PDLIM4-202ENST00000379018 BLNKQ8WV28 456 aa12.02□□□□□ -0.49
PDLIM4-202ENST00000379018 PCNPQ8WW12 178 aaKnown RBP12.02□□□□□ -0.49
PDLIM4-202ENST00000379018 AGPAT4-IT1Q9H0P7 198 aa12.02□□□□□ -0.49
PDLIM4-202ENST00000379018 IGKV2-40A0A087WW87 121 aaPredicted RBP12.01□□□□□ -0.49
PDLIM4-202ENST00000379018 L7N2F9 121 aa12.01□□□□□ -0.49
PDLIM4-202ENST00000379018 IGKV2D-40P01614 121 aaPredicted RBP12.01□□□□□ -0.49
PDLIM4-202ENST00000379018 VAMP2P63027 116 aa12.01□□□□□ -0.49
PDLIM4-202ENST00000379018 C4orf46Q504U0 113 aa12.01□□□□□ -0.49
PDLIM4-202ENST00000379018 PRR9Q5T870 116 aa12.01□□□□□ -0.49
PDLIM4-202ENST00000379018 OR1L4Q8NGR5 311 aa12.01□□□□□ -0.49
PDLIM4-202ENST00000379018 VGLL1Q99990 258 aa12.01□□□□□ -0.49
PDLIM4-202ENST00000379018 TIMM9Q9Y5J7 89 aa12.01□□□□□ -0.49
PDLIM4-202ENST00000379018 TRBV19A0A075B6N1 114 aa12□□□□□ -0.49
PDLIM4-202ENST00000379018 K7EQD1 137 aa12□□□□□ -0.49
PDLIM4-202ENST00000379018 CRYGDP07320 174 aa12□□□□□ -0.49
PDLIM4-202ENST00000379018 TAS2R30P59541 319 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms