RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 OR1N2Q8NGR9 330 aa14.05□□□□□ -0.16
TDP2-202ENST00000378198 PSMG3-AS1Q96PY0 264 aa14.05□□□□□ -0.16
TDP2-202ENST00000378198 NPFFR1Q9GZQ6 430 aa14.05□□□□□ -0.16
TDP2-202ENST00000378198 TAX1BP3O14907 124 aa14.05□□□□□ -0.16
TDP2-202ENST00000378198 EEF1AKMT3Q96AZ1 226 aa14.05□□□□□ -0.16
TDP2-202ENST00000378198 CCDC140Q96MF4 163 aa14.05□□□□□ -0.16
TDP2-202ENST00000378198 PTPRZ1P23471 2315 aaPredicted RBP14.04□□□□□ -0.16
TDP2-202ENST00000378198 PRAC2D3DTV9 90 aa14.04□□□□□ -0.16
TDP2-202ENST00000378198 SMKR1H3BMG3 65 aa14.04□□□□□ -0.16
TDP2-202ENST00000378198 NHLH1Q02575 133 aa14.04□□□□□ -0.16
TDP2-202ENST00000378198 CLEC19AQ6UXS0 136 aa14.04□□□□□ -0.16
TDP2-202ENST00000378198 PIP4P2Q8N4L2 257 aa14.04□□□□□ -0.16
TDP2-202ENST00000378198 RNF185Q96GF1 192 aa14.04□□□□□ -0.16
TDP2-202ENST00000378198 UBTD1Q9HAC8 227 aa14.04□□□□□ -0.16
TDP2-202ENST00000378198 TRBV7-1A0A0A6YYK4 115 aa14.03□□□□□ -0.16
TDP2-202ENST00000378198 CENPVL3A0A0U1RRI6 287 aa14.03□□□□□ -0.16
TDP2-202ENST00000378198 CLPSL1A2RUU4 121 aa14.03□□□□□ -0.16
TDP2-202ENST00000378198 IFI27L1Q96BM0 104 aa14.03□□□□□ -0.16
TDP2-202ENST00000378198 MAP1LC3AQ9H492 121 aa14.03□□□□□ -0.16
TDP2-202ENST00000378198 SPTBN2O15020 2390 aa14.03□□□□□ -0.16
TDP2-202ENST00000378198 LRBAP50851 2863 aa14.03□□□□□ -0.16
TDP2-202ENST00000378198 CD5LO43866 347 aa14.03□□□□□ -0.16
TDP2-202ENST00000378198 LMO4P61968 165 aa14.03□□□□□ -0.16
TDP2-202ENST00000378198 C2orf91Q6ZV80 131 aa14.03□□□□□ -0.16
TDP2-202ENST00000378198 RNF182Q8N6D2 247 aa14.03□□□□□ -0.16
TDP2-202ENST00000378198 MSRB1Q9NZV6 116 aa14.03□□□□□ -0.16
TDP2-202ENST00000378198 DCHS2Q6V1P9 2916 aa14.02□□□□□ -0.16
TDP2-202ENST00000378198 LINC01546A6NGU7 62 aa14.02□□□□□ -0.16
TDP2-202ENST00000378198 G3V318 75 aa14.02□□□□□ -0.16
TDP2-202ENST00000378198 CACNG7P62955 275 aa14.02□□□□□ -0.16
TDP2-202ENST00000378198 VAMP3Q15836 100 aa14.02□□□□□ -0.16
TDP2-202ENST00000378198 MRPL53Q96EL3 112 aaKnown RBP14.02□□□□□ -0.16
TDP2-202ENST00000378198 NPFFO15130 113 aa14.02□□□□□ -0.17
TDP2-202ENST00000378198 METTL26Q96S19 204 aa14.02□□□□□ -0.17
TDP2-202ENST00000378198 CBY1Q9Y3M2 126 aa14.02□□□□□ -0.17
TDP2-202ENST00000378198 DCHS1Q96JQ0 3298 aa14.01□□□□□ -0.17
TDP2-202ENST00000378198 FXYD7P58549 80 aa14.01□□□□□ -0.17
TDP2-202ENST00000378198 ANKRD39Q53RE8 183 aa14.01□□□□□ -0.17
TDP2-202ENST00000378198 PRSS57Q6UWY2 283 aa14.01□□□□□ -0.17
TDP2-202ENST00000378198 IL17RELQ6ZVW7 336 aa14.01□□□□□ -0.17
TDP2-202ENST00000378198 HIF1ANQ9NWT6 349 aa14.01□□□□□ -0.17
TDP2-202ENST00000378198 IGHV3-66A0A0C4DH42 116 aa14□□□□□ -0.17
TDP2-202ENST00000378198 LINC01548A6NM66 108 aa14□□□□□ -0.17
TDP2-202ENST00000378198 BPESC1Q9GZL8 116 aa14□□□□□ -0.17
TDP2-202ENST00000378198 AGPAT4-IT1Q9H0P7 198 aa14□□□□□ -0.17
TDP2-202ENST00000378198 TACC2O95359 2948 aa14□□□□□ -0.17
TDP2-202ENST00000378198 FGF6P10767 208 aa14□□□□□ -0.17
TDP2-202ENST00000378198 C5orf56Q8N8D9 126 aa14□□□□□ -0.17
TDP2-202ENST00000378198 OR4C5Q8NGB2 326 aa14□□□□□ -0.17
TDP2-202ENST00000378198 NXT2Q9NPJ8 142 aaKnown RBP14□□□□□ -0.17
TDP2-202ENST00000378198 WNK2Q9Y3S1 2297 aa14□□□□□ -0.17
TDP2-202ENST00000378198 TMEM78Q5T7P6 136 aa13.99□□□□□ -0.17
TDP2-202ENST00000378198 ATP6V0BQ99437 205 aa13.99□□□□□ -0.17
TDP2-202ENST00000378198 U3KQE9 123 aa13.99□□□□□ -0.17
TDP2-202ENST00000378198 TRAV8-2A0A0B4J237 113 aa13.99□□□□□ -0.17
TDP2-202ENST00000378198 TNFRSF6BO95407 300 aa13.99□□□□□ -0.17
TDP2-202ENST00000378198 SFTPCP11686 197 aa13.99□□□□□ -0.17
TDP2-202ENST00000378198 ATP5G2Q06055 141 aa13.99□□□□□ -0.17
TDP2-202ENST00000378198 BOD1L2Q8IYS8 172 aa13.99□□□□□ -0.17
TDP2-202ENST00000378198 IGKV3D-20A0A0C4DH25 116 aa13.98□□□□□ -0.17
TDP2-202ENST00000378198 K7EP13 123 aa13.98□□□□□ -0.17
TDP2-202ENST00000378198 SEC11AP67812 179 aa13.98□□□□□ -0.17
TDP2-202ENST00000378198 TMEM97Q5BJF2 176 aa13.98□□□□□ -0.17
TDP2-202ENST00000378198 HRNRQ86YZ3 2850 aaPredicted RBP13.97□□□□□ -0.17
TDP2-202ENST00000378198 SNAI2O43623 268 aa13.97□□□□□ -0.17
TDP2-202ENST00000378198 FCER1GP30273 86 aa13.97□□□□□ -0.17
TDP2-202ENST00000378198 C9orf47Q6ZRZ4 202 aa13.97□□□□□ -0.17
TDP2-202ENST00000378198 C8orf86Q6ZUL3 223 aa13.97□□□□□ -0.17
TDP2-202ENST00000378198 IGHV3OR16-13A0A075B7E8 117 aa13.97□□□□□ -0.17
TDP2-202ENST00000378198 IGHV3-74A0A0B4J1X5 117 aa13.97□□□□□ -0.17
TDP2-202ENST00000378198 CBY3A6NI87 242 aa13.97□□□□□ -0.17
TDP2-202ENST00000378198 SMAD7O15105 426 aaKnown RBP13.96□□□□□ -0.17
TDP2-202ENST00000378198 SIVA1O15304 175 aa13.96□□□□□ -0.17
TDP2-202ENST00000378198 PPIFP30405 207 aaKnown RBP13.96□□□□□ -0.17
TDP2-202ENST00000378198 OR9G4Q8NGQ1 327 aa13.96□□□□□ -0.17
TDP2-202ENST00000378198 MOB4Q9Y3A3 225 aa13.96□□□□□ -0.17
TDP2-202ENST00000378198 LEPP41159 167 aa13.95□□□□□ -0.18
TDP2-202ENST00000378198 FOXE3Q13461 319 aa13.95□□□□□ -0.18
TDP2-202ENST00000378198 C11orf21Q9P2W6 132 aa13.95□□□□□ -0.18
TDP2-202ENST00000378198 IGHV3-49A0A0A0MS15 119 aa13.95□□□□□ -0.18
TDP2-202ENST00000378198 FAM223BA6NKX1 122 aa13.95□□□□□ -0.18
TDP2-202ENST00000378198 ZNF207O43670 478 aaKnown RBP13.95□□□□□ -0.18
TDP2-202ENST00000378198 PSMG4Q5JS54 123 aa13.95□□□□□ -0.18
TDP2-202ENST00000378198 SMIM15Q7Z3B0 74 aa13.95□□□□□ -0.18
TDP2-202ENST00000378198 FAM223AQ8IWN6 122 aa13.95□□□□□ -0.18
TDP2-202ENST00000378198 TRAV41A0A0B4J266 112 aa13.94□□□□□ -0.18
TDP2-202ENST00000378198 GAS8-AS1O95177 125 aa13.94□□□□□ -0.18
TDP2-202ENST00000378198 CRIP2P52943 208 aaPredicted RBP13.94□□□□□ -0.18
TDP2-202ENST00000378198 ERASQ7Z444 233 aa13.94□□□□□ -0.18
TDP2-202ENST00000378198 PIFOQ8TCI5 191 aa13.94□□□□□ -0.18
TDP2-202ENST00000378198 PEF1Q9UBV8 284 aaKnown RBP13.94□□□□□ -0.18
TDP2-202ENST00000378198 C19orf54Q5BKX5 351 aa13.94□□□□□ -0.18
TDP2-202ENST00000378198 Q8N8P6 123 aa13.94□□□□□ -0.18
TDP2-202ENST00000378198 A1L4Q6 167 aa13.93□□□□□ -0.18
TDP2-202ENST00000378198 EVI2AP22794 236 aa13.93□□□□□ -0.18
TDP2-202ENST00000378198 C18orf15Q96N68 181 aa13.93□□□□□ -0.18
TDP2-202ENST00000378198 DKK2Q9UBU2 259 aa13.93□□□□□ -0.18
TDP2-202ENST00000378198 IGHV7-4-1A0A0J9YVY3 117 aa13.92□□□□□ -0.18
TDP2-202ENST00000378198 PRSS47A8MTI9 375 aa13.92□□□□□ -0.18
TDP2-202ENST00000378198 AMMECR1LQ6DCA0 310 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms