RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 CFC1BP0CG36 223 aa9.42□□□□□ -0.9
NPHP4-202ENST00000378161 CFC1P0CG37 223 aa9.42□□□□□ -0.9
NPHP4-202ENST00000378161 LINC00643Q86TS7 51 aa9.42□□□□□ -0.9
NPHP4-202ENST00000378161 ZNRF2Q8NHG8 242 aa9.42□□□□□ -0.9
NPHP4-202ENST00000378161 IGF2BP2-AS1Q96M15 143 aa9.42□□□□□ -0.9
NPHP4-202ENST00000378161 IGKV3D-15A0A087WSY6 115 aa9.41□□□□□ -0.9
NPHP4-202ENST00000378161 FAM236DA0A1B0GTK5 79 aa9.41□□□□□ -0.9
NPHP4-202ENST00000378161 FAM236CP0DP71 79 aa9.41□□□□□ -0.9
NPHP4-202ENST00000378161 RBM3P98179 157 aaKnown RBP9.41□□□□□ -0.9
NPHP4-202ENST00000378161 LYZL1Q6UWQ5 148 aa9.41□□□□□ -0.9
NPHP4-202ENST00000378161 Q71RC1 249 aaPredicted RBP9.41□□□□□ -0.9
NPHP4-202ENST00000378161 GGNQ86UU5 652 aa9.41□□□□□ -0.9
NPHP4-202ENST00000378161 ZNF295-AS1Q8N0V1 137 aa9.41□□□□□ -0.9
NPHP4-202ENST00000378161 POLEQ07864 2286 aa9.41□□□□□ -0.9
NPHP4-202ENST00000378161 SPANXN1Q5VSR9 72 aa9.41□□□□□ -0.9
NPHP4-202ENST00000378161 Q6ZT83 130 aa9.41□□□□□ -0.9
NPHP4-202ENST00000378161 RASL10AQ92737 203 aa9.41□□□□□ -0.9
NPHP4-202ENST00000378161 DSCR8Q96T75 97 aa9.41□□□□□ -0.9
NPHP4-202ENST00000378161 TRBV10-2A0A0K0K1G8 114 aa9.4□□□□□ -0.9
NPHP4-202ENST00000378161 C4orf26Q17RF5 130 aa9.4□□□□□ -0.9
NPHP4-202ENST00000378161 TMEM30BQ3MIR4 351 aa9.4□□□□□ -0.9
NPHP4-202ENST00000378161 ITLN1Q8WWA0 313 aa9.4□□□□□ -0.9
NPHP4-202ENST00000378161 TRBV6-6A0A0A6YYG2 114 aa9.4□□□□□ -0.9
NPHP4-202ENST00000378161 S100A4P26447 101 aaKnown RBP9.4□□□□□ -0.9
NPHP4-202ENST00000378161 LY6DQ14210 128 aa9.4□□□□□ -0.9
NPHP4-202ENST00000378161 RNF152Q8N8N0 203 aa9.4□□□□□ -0.9
NPHP4-202ENST00000378161 TMEM190Q8WZ59 177 aa9.4□□□□□ -0.9
NPHP4-202ENST00000378161 TEX49A0A1B0GTD5 131 aa9.4□□□□□ -0.9
NPHP4-202ENST00000378161 GFRA3O60609 400 aa9.4□□□□□ -0.9
NPHP4-202ENST00000378161 TCRAP04437 139 aa9.4□□□□□ -0.9
NPHP4-202ENST00000378161 BAALCQ8WXS3 180 aa9.4□□□□□ -0.9
NPHP4-202ENST00000378161 SIRPDQ9H106 197 aa9.4□□□□□ -0.9
NPHP4-202ENST00000378161 PRO0461Q9UI25 63 aa9.4□□□□□ -0.9
NPHP4-202ENST00000378161 IGKV2D-26A0A0A0MRZ7 120 aa9.4□□□□□ -0.91
NPHP4-202ENST00000378161 DTX2Q86UW9 622 aa9.4□□□□□ -0.91
NPHP4-202ENST00000378161 CCL13Q99616 98 aa9.4□□□□□ -0.91
NPHP4-202ENST00000378161 SCNM1Q9BWG6 230 aa9.4□□□□□ -0.91
NPHP4-202ENST00000378161 IQCF6A8MYZ5 107 aa9.39□□□□□ -0.91
NPHP4-202ENST00000378161 PEAR1Q5VY43 1037 aaPredicted RBP9.39□□□□□ -0.91
NPHP4-202ENST00000378161 MRPL55Q7Z7F7 128 aaKnown RBP9.39□□□□□ -0.91
NPHP4-202ENST00000378161 URB1-AS1Q96HZ7 61 aa9.39□□□□□ -0.91
NPHP4-202ENST00000378161 C11orf68Q9H3H3 251 aaKnown RBP9.39□□□□□ -0.91
NPHP4-202ENST00000378161 F8VRH5 84 aa9.39□□□□□ -0.91
NPHP4-202ENST00000378161 MORN5Q5VZ52 161 aa9.39□□□□□ -0.91
NPHP4-202ENST00000378161 DOCK7Q96N67 2140 aa9.39□□□□□ -0.91
NPHP4-202ENST00000378161 COL4A3Q01955 1670 aa9.39□□□□□ -0.91
NPHP4-202ENST00000378161 LGALS9O00182 355 aa9.38□□□□□ -0.91
NPHP4-202ENST00000378161 MRPL51Q4U2R6 128 aaKnown RBP9.38□□□□□ -0.91
NPHP4-202ENST00000378161 RPL39P5Q59GN2 51 aa9.38□□□□□ -0.91
NPHP4-202ENST00000378161 ZNF714Q96N38 554 aa9.38□□□□□ -0.91
NPHP4-202ENST00000378161 INAFM2P0DMQ5 153 aa9.38□□□□□ -0.91
NPHP4-202ENST00000378161 MBD3L2Q8NHZ7 208 aaPredicted RBP9.38□□□□□ -0.91
NPHP4-202ENST00000378161 MBD6Q96DN6 1003 aa9.38□□□□□ -0.91
NPHP4-202ENST00000378161 LINC01587Q99440 93 aa9.38□□□□□ -0.91
NPHP4-202ENST00000378161 SPTBN1Q01082 2364 aaKnown RBP9.38□□□□□ -0.91
NPHP4-202ENST00000378161 PMS2P5A8MQ11 134 aa9.38□□□□□ -0.91
NPHP4-202ENST00000378161 IGLV2-8P01709 118 aa9.38□□□□□ -0.91
NPHP4-202ENST00000378161 CNTFRP26992 372 aa9.38□□□□□ -0.91
NPHP4-202ENST00000378161 ORMDL2Q53FV1 153 aa9.38□□□□□ -0.91
NPHP4-202ENST00000378161 RBMY1BA6NDE4 496 aaKnown RBP9.37□□□□□ -0.91
NPHP4-202ENST00000378161 RBMY1EA6NEQ0 496 aaKnown RBP9.37□□□□□ -0.91
NPHP4-202ENST00000378161 RBMY1DP0C7P1 496 aaKnown RBP9.37□□□□□ -0.91
NPHP4-202ENST00000378161 RBMY1A1P0DJD3 496 aaKnown RBP9.37□□□□□ -0.91
NPHP4-202ENST00000378161 RBMY1CP0DJD4 496 aa9.37□□□□□ -0.91
NPHP4-202ENST00000378161 RPL27AP46776 148 aaKnown RBP9.37□□□□□ -0.91
NPHP4-202ENST00000378161 RBMY1FQ15415 496 aaKnown RBP9.37□□□□□ -0.91
NPHP4-202ENST00000378161 LEAP2Q969E1 77 aa9.37□□□□□ -0.91
NPHP4-202ENST00000378161 H3BT86 120 aa9.37□□□□□ -0.91
NPHP4-202ENST00000378161 COX7A1P24310 79 aa9.37□□□□□ -0.91
NPHP4-202ENST00000378161 GFRALQ6UXV0 394 aa9.37□□□□□ -0.91
NPHP4-202ENST00000378161 ZNRF1Q8ND25 227 aa9.37□□□□□ -0.91
NPHP4-202ENST00000378161 A0A0B4J2C4 111 aa9.36□□□□□ -0.91
NPHP4-202ENST00000378161 EDN2P20800 178 aa9.36□□□□□ -0.91
NPHP4-202ENST00000378161 CCL8P80075 99 aa9.36□□□□□ -0.91
NPHP4-202ENST00000378161 NDUFA11Q86Y39 141 aa9.36□□□□□ -0.91
NPHP4-202ENST00000378161 PHLDA1Q8WV24 401 aaPredicted RBP9.36□□□□□ -0.91
NPHP4-202ENST00000378161 LAMA2P24043 3122 aaKnown RBP9.36□□□□□ -0.91
NPHP4-202ENST00000378161 ZNF785A8K8V0 405 aa9.36□□□□□ -0.91
NPHP4-202ENST00000378161 IGLV3-1P01715 115 aa9.36□□□□□ -0.91
NPHP4-202ENST00000378161 TMEM133Q9H2Q1 129 aa9.36□□□□□ -0.91
NPHP4-202ENST00000378161 BRCA2P51587 3418 aa9.36□□□□□ -0.91
NPHP4-202ENST00000378161 ZFHX2Q9C0A1 2572 aaPredicted RBP9.36□□□□□ -0.91
NPHP4-202ENST00000378161 TM4SF5O14894 197 aa9.36□□□□□ -0.91
NPHP4-202ENST00000378161 DCTN5Q9BTE1 182 aa9.36□□□□□ -0.91
NPHP4-202ENST00000378161 KIAA1671Q9BY89 1806 aa9.36□□□□□ -0.91
NPHP4-202ENST00000378161 CACNA1BQ00975 2339 aa9.36□□□□□ -0.91
NPHP4-202ENST00000378161 INTS1Q8N201 2190 aaKnown RBP9.36□□□□□ -0.91
NPHP4-202ENST00000378161 IGHV3-48P01763 117 aa9.35□□□□□ -0.91
NPHP4-202ENST00000378161 FOXE3Q13461 319 aa9.35□□□□□ -0.91
NPHP4-202ENST00000378161 LOXL1Q08397 574 aaPredicted RBP9.35□□□□□ -0.91
NPHP4-202ENST00000378161 Q6P435 159 aa9.35□□□□□ -0.91
NPHP4-202ENST00000378161 Q86TA4 180 aa9.35□□□□□ -0.91
NPHP4-202ENST00000378161 FAM90A1Q86YD7 464 aa9.35□□□□□ -0.91
NPHP4-202ENST00000378161 C15orf61A6NNL5 157 aa9.35□□□□□ -0.91
NPHP4-202ENST00000378161 MGPP08493 103 aa9.35□□□□□ -0.91
NPHP4-202ENST00000378161 PRR20EP86478 221 aa9.35□□□□□ -0.91
NPHP4-202ENST00000378161 PRR20CP86479 221 aa9.35□□□□□ -0.91
NPHP4-202ENST00000378161 PRR20DP86480 221 aa9.35□□□□□ -0.91
NPHP4-202ENST00000378161 PRR20BP86481 221 aa9.35□□□□□ -0.91
NPHP4-202ENST00000378161 PRR20AP86496 221 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms