RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 SPRY4Q9C004 299 aa12.05□□□□□ -0.48
NPHP4-201ENST00000378156 IGKV3D-20A0A0C4DH25 116 aa12.05□□□□□ -0.48
NPHP4-201ENST00000378156 IGHV2-70DA0A0C4DH43 119 aa12.05□□□□□ -0.48
NPHP4-201ENST00000378156 VCYO14598 125 aa12.05□□□□□ -0.48
NPHP4-201ENST00000378156 Q8TAT8 98 aa12.04□□□□□ -0.48
NPHP4-201ENST00000378156 RHPN1-AS1Q9BWJ2 59 aa12.04□□□□□ -0.48
NPHP4-201ENST00000378156 KAAG1Q9UBP8 84 aa12.04□□□□□ -0.48
NPHP4-201ENST00000378156 SAP30O75446 220 aa12.04□□□□□ -0.48
NPHP4-201ENST00000378156 DPH3P1Q9H4G8 78 aa12.04□□□□□ -0.48
NPHP4-201ENST00000378156 DKK4Q9UBT3 224 aa12.04□□□□□ -0.48
NPHP4-201ENST00000378156 SRRM4A7MD48 611 aaKnown RBP12.04□□□□□ -0.48
NPHP4-201ENST00000378156 ATP6V0E1O15342 81 aa12.04□□□□□ -0.48
NPHP4-201ENST00000378156 MAPK1IP1LQ8NDC0 245 aa12.04□□□□□ -0.48
NPHP4-201ENST00000378156 A0A1W2PNU3 283 aaPredicted RBP12.04□□□□□ -0.48
NPHP4-201ENST00000378156 SHANK2-AS3Q9BTD1 123 aa12.04□□□□□ -0.48
NPHP4-201ENST00000378156 MALP21145 153 aa12.03□□□□□ -0.48
NPHP4-201ENST00000378156 LINC00477Q96M19 166 aa12.03□□□□□ -0.48
NPHP4-201ENST00000378156 OVOL3O00110 214 aa12.03□□□□□ -0.48
NPHP4-201ENST00000378156 IGLC2P0DOY2 106 aa12.03□□□□□ -0.48
NPHP4-201ENST00000378156 IGLC3P0DOY3 106 aa12.03□□□□□ -0.48
NPHP4-201ENST00000378156 IGFL4Q6B9Z1 124 aa12.03□□□□□ -0.48
NPHP4-201ENST00000378156 SPANXDQ9BXN6 97 aa12.03□□□□□ -0.48
NPHP4-201ENST00000378156 CMC4P56277 68 aaPredicted RBP12.03□□□□□ -0.48
NPHP4-201ENST00000378156 PHLDA1Q8WV24 401 aaPredicted RBP12.03□□□□□ -0.48
NPHP4-201ENST00000378156 TMEM158Q8WZ71 300 aa12.03□□□□□ -0.48
NPHP4-201ENST00000378156 LCNL1Q6ZST4 164 aa12.02□□□□□ -0.48
NPHP4-201ENST00000378156 FAM110DQ8TAY7 271 aaPredicted RBP12.02□□□□□ -0.48
NPHP4-201ENST00000378156 FCN3O75636 299 aa12.02□□□□□ -0.48
NPHP4-201ENST00000378156 PTPN13Q12923 2485 aa12.02□□□□□ -0.49
NPHP4-201ENST00000378156 SH2D1AO60880 128 aa12.02□□□□□ -0.49
NPHP4-201ENST00000378156 NDUFB8O95169 186 aa12.02□□□□□ -0.49
NPHP4-201ENST00000378156 WT1-ASQ06250 92 aa12.02□□□□□ -0.49
NPHP4-201ENST00000378156 CT83Q5H943 113 aa12.02□□□□□ -0.49
NPHP4-201ENST00000378156 KLHL30-AS1Q8NEE0 82 aa12.02□□□□□ -0.49
NPHP4-201ENST00000378156 DAZ1Q9NQZ3 744 aaKnown RBP12.02□□□□□ -0.49
NPHP4-201ENST00000378156 C18orf32Q8TCD1 76 aa12.01□□□□□ -0.49
NPHP4-201ENST00000378156 TRBV20-1A0A075B6N2 111 aa12.01□□□□□ -0.49
NPHP4-201ENST00000378156 DIAPH2-AS1Q14236 149 aa12.01□□□□□ -0.49
NPHP4-201ENST00000378156 GRNP28799 593 aaKnown RBP12.01□□□□□ -0.49
NPHP4-201ENST00000378156 YPEL3P61236 119 aaPredicted RBP12.01□□□□□ -0.49
NPHP4-201ENST00000378156 PDE6HQ13956 83 aa12.01□□□□□ -0.49
NPHP4-201ENST00000378156 RASL10AQ92737 203 aa12.01□□□□□ -0.49
NPHP4-201ENST00000378156 DPH3Q96FX2 82 aa12.01□□□□□ -0.49
NPHP4-201ENST00000378156 TPSG1Q9NRR2 321 aa12.01□□□□□ -0.49
NPHP4-201ENST00000378156 ZNF492Q9P255 531 aa12.01□□□□□ -0.49
NPHP4-201ENST00000378156 LINC00158P58513 81 aa12.01□□□□□ -0.49
NPHP4-201ENST00000378156 FXYD7P58549 80 aa12.01□□□□□ -0.49
NPHP4-201ENST00000378156 ADARB2-AS1A8MUL3 147 aa12□□□□□ -0.49
NPHP4-201ENST00000378156 SHISA9B4DS77 424 aa12□□□□□ -0.49
NPHP4-201ENST00000378156 G3V318 75 aa12□□□□□ -0.49
NPHP4-201ENST00000378156 TEX43Q6ZNM6 134 aa12□□□□□ -0.49
NPHP4-201ENST00000378156 KLF12Q9Y4X4 402 aa12□□□□□ -0.49
NPHP4-201ENST00000378156 TRGV4A0A0C4DH28 118 aa12□□□□□ -0.49
NPHP4-201ENST00000378156 C9orf118A6NHY6 69 aa12□□□□□ -0.49
NPHP4-201ENST00000378156 IGHV3-64A0A075B6Q5 118 aa12□□□□□ -0.49
NPHP4-201ENST00000378156 ASPHD1Q5U4P2 390 aa12□□□□□ -0.49
NPHP4-201ENST00000378156 MCRIP2Q9BUT9 160 aaKnown RBP12□□□□□ -0.49
NPHP4-201ENST00000378156 HIST1H4AP62805 103 aaKnown RBP12□□□□□ -0.49
NPHP4-201ENST00000378156 SPRNQ5BIV9 151 aa12□□□□□ -0.49
NPHP4-201ENST00000378156 PRR14LQ5THK1 2151 aa12□□□□□ -0.49
NPHP4-201ENST00000378156 DENND4AQ7Z401 1863 aa12□□□□□ -0.49
NPHP4-201ENST00000378156 SYNJ2BPP57105 145 aa11.99□□□□□ -0.49
NPHP4-201ENST00000378156 ZNF876PQ49A33 203 aa11.99□□□□□ -0.49
NPHP4-201ENST00000378156 DNAJC30Q96LL9 226 aa11.99□□□□□ -0.49
NPHP4-201ENST00000378156 SONP18583 2426 aaKnown RBP11.99□□□□□ -0.49
NPHP4-201ENST00000378156 A0A0U1RRA0 63 aa11.99□□□□□ -0.49
NPHP4-201ENST00000378156 Q86TA4 180 aa11.99□□□□□ -0.49
NPHP4-201ENST00000378156 V9GYV3 84 aa11.99□□□□□ -0.49
NPHP4-201ENST00000378156 NCOR2Q9Y618 2525 aa11.99□□□□□ -0.49
NPHP4-201ENST00000378156 DNAH12Q6ZR08 3092 aa11.99□□□□□ -0.49
NPHP4-201ENST00000378156 NEGR1Q7Z3B1 354 aa11.99□□□□□ -0.49
NPHP4-201ENST00000378156 C9JAW5 83 aa11.98□□□□□ -0.49
NPHP4-201ENST00000378156 MYMXA0A1B0GTQ4 84 aa11.98□□□□□ -0.49
NPHP4-201ENST00000378156 NDUFS7O75251 213 aa11.98□□□□□ -0.49
NPHP4-201ENST00000378156 AMN1Q8IY45 258 aa11.98□□□□□ -0.49
NPHP4-201ENST00000378156 F8W1H4 67 aa11.98□□□□□ -0.49
NPHP4-201ENST00000378156 NPSP0C0P6 89 aa11.98□□□□□ -0.49
NPHP4-201ENST00000378156 EDA2RQ9HAV5 297 aa11.98□□□□□ -0.49
NPHP4-201ENST00000378156 CDPF1Q6NVV7 123 aa11.98□□□□□ -0.49
NPHP4-201ENST00000378156 PRO3102Q9H379 93 aa11.97□□□□□ -0.49
NPHP4-201ENST00000378156 C22orf46C9J442 243 aa11.97□□□□□ -0.49
NPHP4-201ENST00000378156 PPDPFLQ8WWR9 84 aa11.97□□□□□ -0.49
NPHP4-201ENST00000378156 Q96MF0 132 aa11.97□□□□□ -0.49
NPHP4-201ENST00000378156 PRR20EP86478 221 aa11.97□□□□□ -0.49
NPHP4-201ENST00000378156 PRR20CP86479 221 aa11.97□□□□□ -0.49
NPHP4-201ENST00000378156 PRR20DP86480 221 aa11.97□□□□□ -0.49
NPHP4-201ENST00000378156 PRR20BP86481 221 aa11.97□□□□□ -0.49
NPHP4-201ENST00000378156 PRR20AP86496 221 aa11.97□□□□□ -0.49
NPHP4-201ENST00000378156 SLAQ13239 276 aa11.97□□□□□ -0.49
NPHP4-201ENST00000378156 POU2AF1Q16633 256 aa11.97□□□□□ -0.49
NPHP4-201ENST00000378156 GATD1Q8NB37 220 aa11.97□□□□□ -0.49
NPHP4-201ENST00000378156 JPT2Q9H910 190 aa11.97□□□□□ -0.49
NPHP4-201ENST00000378156 CTSZQ9UBR2 303 aa11.97□□□□□ -0.49
NPHP4-201ENST00000378156 RCHY1Q96PM5 261 aa11.97□□□□□ -0.49
NPHP4-201ENST00000378156 CSTL1Q9H114 145 aa11.97□□□□□ -0.49
NPHP4-201ENST00000378156 K7EP13 123 aa11.96□□□□□ -0.49
NPHP4-201ENST00000378156 CRIP3Q6Q6R5 217 aa11.96□□□□□ -0.49
NPHP4-201ENST00000378156 STPG4Q8N801 248 aa11.96□□□□□ -0.49
NPHP4-201ENST00000378156 PAX4O43316 350 aa11.96□□□□□ -0.49
NPHP4-201ENST00000378156 CR1LQ2VPA4 569 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms