RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 SFTA2Q6UW10 78 aa12.26□□□□□ -0.45
CSNK1A1-202ENST00000377843 HLA-DRB4X5D2U9 266 aa12.26□□□□□ -0.45
CSNK1A1-202ENST00000377843 TM4SF5O14894 197 aa12.26□□□□□ -0.45
CSNK1A1-202ENST00000377843 THBDP07204 575 aa12.26□□□□□ -0.45
CSNK1A1-202ENST00000377843 PSMG4Q5JS54 123 aa12.26□□□□□ -0.45
CSNK1A1-202ENST00000377843 RNF7Q9UBF6 113 aa12.25□□□□□ -0.45
CSNK1A1-202ENST00000377843 INTS1Q8N201 2190 aaKnown RBP12.25□□□□□ -0.45
CSNK1A1-202ENST00000377843 TNFRSF13BO14836 293 aaPredicted RBP12.25□□□□□ -0.45
CSNK1A1-202ENST00000377843 TNFRSF6BO95407 300 aa12.25□□□□□ -0.45
CSNK1A1-202ENST00000377843 IGKV1-17P01599 117 aa12.25□□□□□ -0.45
CSNK1A1-202ENST00000377843 ZNF80P51504 273 aaPredicted RBP12.25□□□□□ -0.45
CSNK1A1-202ENST00000377843 C9orf106Q8NAJ2 232 aa12.25□□□□□ -0.45
CSNK1A1-202ENST00000377843 DKK4Q9UBT3 224 aa12.25□□□□□ -0.45
CSNK1A1-202ENST00000377843 MRPS12O15235 138 aaKnown RBP12.25□□□□□ -0.45
CSNK1A1-202ENST00000377843 ATP6V0E2Q8NHE4 81 aa12.25□□□□□ -0.45
CSNK1A1-202ENST00000377843 SHANK2-AS3Q9BTD1 123 aa12.25□□□□□ -0.45
CSNK1A1-202ENST00000377843 PRSS29PA6NIE9 313 aa12.24□□□□□ -0.45
CSNK1A1-202ENST00000377843 CCL11P51671 97 aa12.24□□□□□ -0.45
CSNK1A1-202ENST00000377843 ZFP2Q6ZN57 461 aa12.24□□□□□ -0.45
CSNK1A1-202ENST00000377843 PSMG3-AS1Q96PY0 264 aa12.24□□□□□ -0.45
CSNK1A1-202ENST00000377843 IGKV2-40A0A087WW87 121 aaPredicted RBP12.24□□□□□ -0.45
CSNK1A1-202ENST00000377843 IGKV2D-40P01614 121 aaPredicted RBP12.24□□□□□ -0.45
CSNK1A1-202ENST00000377843 VMA21Q3ZAQ7 101 aa12.24□□□□□ -0.45
CSNK1A1-202ENST00000377843 CTSZQ9UBR2 303 aa12.24□□□□□ -0.45
CSNK1A1-202ENST00000377843 KALRNO60229 2985 aa12.23□□□□□ -0.45
CSNK1A1-202ENST00000377843 H3BRN7 92 aa12.23□□□□□ -0.45
CSNK1A1-202ENST00000377843 ENSAO43768 121 aaKnown RBP12.23□□□□□ -0.45
CSNK1A1-202ENST00000377843 ATP5LO75964 103 aa12.23□□□□□ -0.45
CSNK1A1-202ENST00000377843 NDUFA3O95167 84 aa12.23□□□□□ -0.45
CSNK1A1-202ENST00000377843 IGLC6P0CF74 106 aa12.23□□□□□ -0.45
CSNK1A1-202ENST00000377843 RPL27AP46776 148 aaKnown RBP12.23□□□□□ -0.45
CSNK1A1-202ENST00000377843 PIP4P1Q86T03 277 aa12.23□□□□□ -0.45
CSNK1A1-202ENST00000377843 SCNM1Q9BWG6 230 aa12.23□□□□□ -0.45
CSNK1A1-202ENST00000377843 K7EM74 188 aa12.23□□□□□ -0.45
CSNK1A1-202ENST00000377843 C1orf162Q8NEQ5 155 aaPredicted RBP12.23□□□□□ -0.45
CSNK1A1-202ENST00000377843 Q8TAT8 98 aa12.23□□□□□ -0.45
CSNK1A1-202ENST00000377843 IGLV2-18A0A075B6J9 118 aa12.22□□□□□ -0.45
CSNK1A1-202ENST00000377843 TMEM30BQ3MIR4 351 aa12.22□□□□□ -0.45
CSNK1A1-202ENST00000377843 ANAPC13Q9BS18 74 aa12.22□□□□□ -0.45
CSNK1A1-202ENST00000377843 FAM90A27PA6NNH2 459 aa12.22□□□□□ -0.45
CSNK1A1-202ENST00000377843 TMEM200BQ69YZ2 307 aa12.22□□□□□ -0.45
CSNK1A1-202ENST00000377843 RASL11BQ9BPW5 248 aa12.22□□□□□ -0.45
CSNK1A1-202ENST00000377843 B5MCH6 92 aa12.21□□□□□ -0.45
CSNK1A1-202ENST00000377843 TEX22C9J3V5 150 aa12.21□□□□□ -0.45
CSNK1A1-202ENST00000377843 HOXA3O43365 443 aaPredicted RBP12.21□□□□□ -0.45
CSNK1A1-202ENST00000377843 NHLRC4P0CG21 123 aaPredicted RBP12.21□□□□□ -0.45
CSNK1A1-202ENST00000377843 GATA4P43694 442 aa12.21□□□□□ -0.45
CSNK1A1-202ENST00000377843 PSMB2P49721 201 aa12.21□□□□□ -0.45
CSNK1A1-202ENST00000377843 SHISA2Q6UWI4 295 aa12.21□□□□□ -0.45
CSNK1A1-202ENST00000377843 DLX4Q92988 240 aaPredicted RBP12.21□□□□□ -0.45
CSNK1A1-202ENST00000377843 KIR2DL4Q99706 377 aa12.21□□□□□ -0.45
CSNK1A1-202ENST00000377843 NXT2Q9NPJ8 142 aaKnown RBP12.21□□□□□ -0.45
CSNK1A1-202ENST00000377843 SLC25A15Q9Y619 301 aa12.21□□□□□ -0.45
CSNK1A1-202ENST00000377843 A6NJY4 79 aa12.21□□□□□ -0.46
CSNK1A1-202ENST00000377843 I3L2K1 104 aa12.21□□□□□ -0.46
CSNK1A1-202ENST00000377843 IGHV1-46P01743 117 aa12.21□□□□□ -0.46
CSNK1A1-202ENST00000377843 Q6ZS92 163 aa12.21□□□□□ -0.46
CSNK1A1-202ENST00000377843 SRSF8Q9BRL6 282 aaKnown RBP12.21□□□□□ -0.46
CSNK1A1-202ENST00000377843 ZZEF1O43149 2961 aa12.2□□□□□ -0.46
CSNK1A1-202ENST00000377843 M0R1B8 84 aa12.2□□□□□ -0.46
CSNK1A1-202ENST00000377843 WT1P19544 449 aaPredicted RBP12.2□□□□□ -0.46
CSNK1A1-202ENST00000377843 TNFAIP6P98066 277 aaPredicted RBP12.2□□□□□ -0.46
CSNK1A1-202ENST00000377843 LYPD1Q8N2G4 141 aa12.2□□□□□ -0.46
CSNK1A1-202ENST00000377843 UFC1Q9Y3C8 167 aa12.2□□□□□ -0.46
CSNK1A1-202ENST00000377843 PIEZO2Q9H5I5 2752 aa12.2□□□□□ -0.46
CSNK1A1-202ENST00000377843 LINC01549A6NIU2 74 aa12.2□□□□□ -0.46
CSNK1A1-202ENST00000377843 EFNA4P52798 201 aa12.2□□□□□ -0.46
CSNK1A1-202ENST00000377843 RPEQ96AT9 228 aa12.2□□□□□ -0.46
CSNK1A1-202ENST00000377843 PROCRQ9UNN8 238 aa12.2□□□□□ -0.46
CSNK1A1-202ENST00000377843 GAGE5Q13069 117 aa12.19□□□□□ -0.46
CSNK1A1-202ENST00000377843 GAGE6Q13070 117 aa12.19□□□□□ -0.46
CSNK1A1-202ENST00000377843 PRR25Q96S07 402 aa12.19□□□□□ -0.46
CSNK1A1-202ENST00000377843 A0A087WX48 190 aa12.19□□□□□ -0.46
CSNK1A1-202ENST00000377843 IL4P05112 153 aa12.19□□□□□ -0.46
CSNK1A1-202ENST00000377843 ZNF491Q8N8L2 437 aa12.19□□□□□ -0.46
CSNK1A1-202ENST00000377843 MYMXA0A1B0GTQ4 84 aa12.18□□□□□ -0.46
CSNK1A1-202ENST00000377843 CRYGBP07316 175 aa12.18□□□□□ -0.46
CSNK1A1-202ENST00000377843 LGALS1P09382 135 aaKnown RBP12.18□□□□□ -0.46
CSNK1A1-202ENST00000377843 DLX1P56177 255 aa12.18□□□□□ -0.46
CSNK1A1-202ENST00000377843 PRB3Q04118 309 aaPredicted RBP12.18□□□□□ -0.46
CSNK1A1-202ENST00000377843 ANXA2RQ3ZCQ2 193 aa12.18□□□□□ -0.46
CSNK1A1-202ENST00000377843 Q8N8P6 123 aa12.18□□□□□ -0.46
CSNK1A1-202ENST00000377843 LOC107984156A0A0G2JMH3 177 aa12.18□□□□□ -0.46
CSNK1A1-202ENST00000377843 NCBP2LA6PVI3 153 aaKnown RBP12.18□□□□□ -0.46
CSNK1A1-202ENST00000377843 CEACAM4O75871 244 aa12.18□□□□□ -0.46
CSNK1A1-202ENST00000377843 IGFL4Q6B9Z1 124 aa12.18□□□□□ -0.46
CSNK1A1-202ENST00000377843 ARL17AQ8IVW1 177 aa12.18□□□□□ -0.46
CSNK1A1-202ENST00000377843 PPDPFLQ8WWR9 84 aa12.18□□□□□ -0.46
CSNK1A1-202ENST00000377843 S4R3C0 116 aa12.18□□□□□ -0.46
CSNK1A1-202ENST00000377843 IGLV3-9A0A075B6K5 115 aa12.17□□□□□ -0.46
CSNK1A1-202ENST00000377843 DTX2Q86UW9 622 aa12.17□□□□□ -0.46
CSNK1A1-202ENST00000377843 BSNQ9UPA5 3926 aa12.17□□□□□ -0.46
CSNK1A1-202ENST00000377843 COX8CQ7Z4L0 72 aa12.17□□□□□ -0.46
CSNK1A1-202ENST00000377843 SIGLEC9Q9Y336 463 aa12.17□□□□□ -0.46
CSNK1A1-202ENST00000377843 TRAV26-2A0A0B4J265 109 aa12.16□□□□□ -0.46
CSNK1A1-202ENST00000377843 TEX36Q5VZQ5 186 aa12.16□□□□□ -0.46
CSNK1A1-202ENST00000377843 TEN1Q86WV5 123 aa12.16□□□□□ -0.46
CSNK1A1-202ENST00000377843 RNF125Q96EQ8 232 aa12.16□□□□□ -0.46
CSNK1A1-202ENST00000377843 RALYQ9UKM9 306 aaKnown RBP12.16□□□□□ -0.46
CSNK1A1-202ENST00000377843 ANKRD11Q6UB99 2663 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms