RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 SORL1Q92673 2214 aa9.61□□□□□ -0.87
CBWD3-203ENST00000377344 ZNF727A8MUV8 499 aa9.61□□□□□ -0.87
CBWD3-203ENST00000377344 NDUFS6O75380 124 aaKnown RBP9.61□□□□□ -0.87
CBWD3-203ENST00000377344 KRTAP10-11P60412 298 aa9.61□□□□□ -0.87
CBWD3-203ENST00000377344 FLI1Q01543 452 aaPredicted RBP9.61□□□□□ -0.87
CBWD3-203ENST00000377344 TMEM183BQ1AE95 376 aa9.61□□□□□ -0.87
CBWD3-203ENST00000377344 SAMD5Q5TGI4 173 aa9.61□□□□□ -0.87
CBWD3-203ENST00000377344 AGPAT4-IT1Q9H0P7 198 aa9.61□□□□□ -0.87
CBWD3-203ENST00000377344 PPP1R14DQ9NXH3 145 aa9.61□□□□□ -0.87
CBWD3-203ENST00000377344 PSG8Q9UQ74 426 aa9.61□□□□□ -0.87
CBWD3-203ENST00000377344 TMEM218A2RU14 115 aa9.6□□□□□ -0.87
CBWD3-203ENST00000377344 DUSP14O95147 198 aaKnown RBP9.6□□□□□ -0.87
CBWD3-203ENST00000377344 IGLV2-11P01706 119 aa9.6□□□□□ -0.87
CBWD3-203ENST00000377344 C9orf47Q6ZRZ4 202 aa9.6□□□□□ -0.87
CBWD3-203ENST00000377344 STHQ8IWL8 128 aa9.6□□□□□ -0.87
CBWD3-203ENST00000377344 DEFB125Q8N687 156 aa9.6□□□□□ -0.87
CBWD3-203ENST00000377344 FAM110AQ9BQ89 295 aa9.6□□□□□ -0.87
CBWD3-203ENST00000377344 C19orf73Q9NVV2 129 aa9.6□□□□□ -0.87
CBWD3-203ENST00000377344 KLF12Q9Y4X4 402 aa9.6□□□□□ -0.87
CBWD3-203ENST00000377344 CMYA5Q8N3K9 4069 aa9.6□□□□□ -0.87
CBWD3-203ENST00000377344 NPIPB6E9PJ23 425 aa9.59□□□□□ -0.87
CBWD3-203ENST00000377344 F8W036 122 aa9.59□□□□□ -0.87
CBWD3-203ENST00000377344 S100A9P06702 114 aaKnown RBP9.59□□□□□ -0.87
CBWD3-203ENST00000377344 HLA-DRB4P13762 266 aa9.59□□□□□ -0.87
CBWD3-203ENST00000377344 GNG4P50150 75 aa9.59□□□□□ -0.87
CBWD3-203ENST00000377344 ZNF138P52744 262 aa9.59□□□□□ -0.87
CBWD3-203ENST00000377344 EGFEM1PQ0D2K5 195 aa9.59□□□□□ -0.87
CBWD3-203ENST00000377344 CENPWQ5EE01 88 aa9.59□□□□□ -0.87
CBWD3-203ENST00000377344 Q86TA4 180 aa9.59□□□□□ -0.87
CBWD3-203ENST00000377344 BAGE2Q86Y30 109 aa9.59□□□□□ -0.87
CBWD3-203ENST00000377344 NHLRC2Q8NBF2 726 aa9.59□□□□□ -0.87
CBWD3-203ENST00000377344 LINC00477Q96M19 166 aa9.59□□□□□ -0.87
CBWD3-203ENST00000377344 HLA-DRB4X5D2U9 266 aa9.59□□□□□ -0.87
CBWD3-203ENST00000377344 H3BMM0 161 aa9.59□□□□□ -0.88
CBWD3-203ENST00000377344 TAS2R60P59551 318 aa9.59□□□□□ -0.88
CBWD3-203ENST00000377344 NDFIP1Q9BT67 221 aa9.59□□□□□ -0.88
CBWD3-203ENST00000377344 ZNF492Q9P255 531 aa9.59□□□□□ -0.88
CBWD3-203ENST00000377344 DNHD1Q96M86 4753 aa9.58□□□□□ -0.88
CBWD3-203ENST00000377344 PGPEP1LA6NFU8 196 aa9.58□□□□□ -0.88
CBWD3-203ENST00000377344 FBLL1A6NHQ2 334 aaKnown RBP9.58□□□□□ -0.88
CBWD3-203ENST00000377344 J3KRW8 73 aa9.58□□□□□ -0.88
CBWD3-203ENST00000377344 CT45A10P0DMU9 189 aa9.58□□□□□ -0.88
CBWD3-203ENST00000377344 FAM74A3Q4VXF1 159 aa9.58□□□□□ -0.88
CBWD3-203ENST00000377344 TRBV20OR9-2A0A075B6H5 130 aa9.57□□□□□ -0.88
CBWD3-203ENST00000377344 LTAP01374 205 aa9.57□□□□□ -0.88
CBWD3-203ENST00000377344 ADCYAP1P18509 176 aa9.57□□□□□ -0.88
CBWD3-203ENST00000377344 IGF2BP2-AS1Q96M15 143 aa9.57□□□□□ -0.88
CBWD3-203ENST00000377344 NIPSNAP3BQ9BS92 247 aa9.57□□□□□ -0.88
CBWD3-203ENST00000377344 AURKAIP1Q9NWT8 199 aaPredicted RBP9.57□□□□□ -0.88
CBWD3-203ENST00000377344 MGST1P10620 155 aaKnown RBP9.56□□□□□ -0.88
CBWD3-203ENST00000377344 TMEM241Q24JQ0 296 aa9.56□□□□□ -0.88
CBWD3-203ENST00000377344 SAPCD1Q5SSQ6 148 aa9.56□□□□□ -0.88
CBWD3-203ENST00000377344 Q8N1Y9 231 aa9.56□□□□□ -0.88
CBWD3-203ENST00000377344 C8orf49Q96NF6 230 aa9.56□□□□□ -0.88
CBWD3-203ENST00000377344 SRD5A3Q9H8P0 318 aa9.56□□□□□ -0.88
CBWD3-203ENST00000377344 ZFP30Q9Y2G7 519 aa9.56□□□□□ -0.88
CBWD3-203ENST00000377344 AGRNO00468 2067 aa9.56□□□□□ -0.88
CBWD3-203ENST00000377344 TRBV6-1A0A0K0K1D8 114 aa9.56□□□□□ -0.88
CBWD3-203ENST00000377344 C9JCJ5 164 aa9.56□□□□□ -0.88
CBWD3-203ENST00000377344 RPL35AP18077 110 aaKnown RBP9.56□□□□□ -0.88
CBWD3-203ENST00000377344 FXYD7P58549 80 aa9.56□□□□□ -0.88
CBWD3-203ENST00000377344 TVP23CQ96ET8 276 aa9.56□□□□□ -0.88
CBWD3-203ENST00000377344 SEC11CQ9BY50 192 aa9.56□□□□□ -0.88
CBWD3-203ENST00000377344 TUBA4BQ9H853 241 aa9.56□□□□□ -0.88
CBWD3-203ENST00000377344 NAT8Q9UHE5 227 aa9.56□□□□□ -0.88
CBWD3-203ENST00000377344 KRBOX1C9JBD0 128 aa9.55□□□□□ -0.88
CBWD3-203ENST00000377344 M0R2Z0 102 aa9.55□□□□□ -0.88
CBWD3-203ENST00000377344 SPINK13Q1W4C9 94 aa9.55□□□□□ -0.88
CBWD3-203ENST00000377344 PRR27Q6MZM9 219 aa9.55□□□□□ -0.88
CBWD3-203ENST00000377344 TRPT1Q86TN4 253 aaKnown RBP9.55□□□□□ -0.88
CBWD3-203ENST00000377344 TMEM183AQ8IXX5 376 aa9.55□□□□□ -0.88
CBWD3-203ENST00000377344 OCC1Q8TAD7 63 aa9.55□□□□□ -0.88
CBWD3-203ENST00000377344 RBMY1BA6NDE4 496 aaKnown RBP9.54□□□□□ -0.88
CBWD3-203ENST00000377344 RBMY1EA6NEQ0 496 aaKnown RBP9.54□□□□□ -0.88
CBWD3-203ENST00000377344 PRB2P02812 416 aaPredicted RBP9.54□□□□□ -0.88
CBWD3-203ENST00000377344 GPX1P07203 203 aa9.54□□□□□ -0.88
CBWD3-203ENST00000377344 RBMY1DP0C7P1 496 aaKnown RBP9.54□□□□□ -0.88
CBWD3-203ENST00000377344 LEPP41159 167 aa9.54□□□□□ -0.88
CBWD3-203ENST00000377344 NUTF2P61970 127 aaKnown RBP9.54□□□□□ -0.88
CBWD3-203ENST00000377344 ADIRFQ15847 76 aa9.54□□□□□ -0.88
CBWD3-203ENST00000377344 SMUG1Q53HV7 270 aa9.54□□□□□ -0.88
CBWD3-203ENST00000377344 LCE2DQ5TA82 110 aaPredicted RBP9.54□□□□□ -0.88
CBWD3-203ENST00000377344 LENEPQ9Y5L5 61 aa9.54□□□□□ -0.88
CBWD3-203ENST00000377344 TRAV12-2A0A075B6T6 113 aa9.54□□□□□ -0.88
CBWD3-203ENST00000377344 APOC3P02656 99 aa9.54□□□□□ -0.88
CBWD3-203ENST00000377344 TSPOP30536 169 aa9.54□□□□□ -0.88
CBWD3-203ENST00000377344 CDKN1BP46527 198 aa9.54□□□□□ -0.88
CBWD3-203ENST00000377344 AMTNQ6UX39 209 aa9.54□□□□□ -0.88
CBWD3-203ENST00000377344 SDF2L1Q9HCN8 221 aa9.54□□□□□ -0.88
CBWD3-203ENST00000377344 GCGP01275 180 aa9.53□□□□□ -0.88
CBWD3-203ENST00000377344 IGLV2-8P01709 118 aa9.53□□□□□ -0.88
CBWD3-203ENST00000377344 IGHV4-30-4P0DP06 118 aa9.53□□□□□ -0.88
CBWD3-203ENST00000377344 RNASE4P34096 147 aaKnown RBP9.53□□□□□ -0.88
CBWD3-203ENST00000377344 OR5I1Q13606 314 aa9.53□□□□□ -0.88
CBWD3-203ENST00000377344 KIR3DS1Q14943 382 aa9.53□□□□□ -0.88
CBWD3-203ENST00000377344 LINC01551Q86U37 167 aa9.53□□□□□ -0.88
CBWD3-203ENST00000377344 SMIM12Q96EX1 92 aa9.53□□□□□ -0.88
CBWD3-203ENST00000377344 ZC2HC1AQ96GY0 325 aa9.53□□□□□ -0.88
CBWD3-203ENST00000377344 FAM19A4Q96LR4 140 aa9.53□□□□□ -0.88
CBWD3-203ENST00000377344 ODF3Q96PU9 254 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms