RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 ACTL10Q5JWF8 245 aa9.55□□□□□ -0.88
CLCN6-206ENST00000376496 TEX29Q8N6K0 151 aa9.55□□□□□ -0.88
CLCN6-206ENST00000376496 NUP35Q8NFH5 326 aa9.55□□□□□ -0.88
CLCN6-206ENST00000376496 OR2D3Q8NGH3 330 aa9.55□□□□□ -0.88
CLCN6-206ENST00000376496 GTSF1Q8WW33 167 aa9.55□□□□□ -0.88
CLCN6-206ENST00000376496 GRAMD2BQ96HH9 432 aa9.55□□□□□ -0.88
CLCN6-206ENST00000376496 BTF3L4Q96K17 158 aa9.55□□□□□ -0.88
CLCN6-206ENST00000376496 UBE2E2Q96LR5 201 aa9.55□□□□□ -0.88
CLCN6-206ENST00000376496 FN1P02751 2386 aaKnown RBP9.55□□□□□ -0.88
CLCN6-206ENST00000376496 TMEM89A2RUT3 159 aa9.55□□□□□ -0.88
CLCN6-206ENST00000376496 ZNF253O75346 499 aa9.55□□□□□ -0.88
CLCN6-206ENST00000376496 TMEM86BQ8N661 226 aa9.55□□□□□ -0.88
CLCN6-206ENST00000376496 PRR25Q96S07 402 aa9.55□□□□□ -0.88
CLCN6-206ENST00000376496 SLC50A1Q9BRV3 221 aa9.55□□□□□ -0.88
CLCN6-206ENST00000376496 J3KRW8 73 aa9.55□□□□□ -0.88
CLCN6-206ENST00000376496 Q6ZQT7 251 aa9.55□□□□□ -0.88
CLCN6-206ENST00000376496 PGLYRP4Q96LB8 373 aa9.55□□□□□ -0.88
CLCN6-206ENST00000376496 AGPAT4-IT1Q9H0P7 198 aa9.55□□□□□ -0.88
CLCN6-206ENST00000376496 SNURFLB1AK76 121 aa9.54□□□□□ -0.88
CLCN6-206ENST00000376496 KIAA1644Q3SXP7 199 aa9.54□□□□□ -0.88
CLCN6-206ENST00000376496 ZNF738Q8NE65 137 aa9.54□□□□□ -0.88
CLCN6-206ENST00000376496 ZFP30Q9Y2G7 519 aa9.54□□□□□ -0.88
CLCN6-206ENST00000376496 ZNF492Q9P255 531 aa9.54□□□□□ -0.88
CLCN6-206ENST00000376496 MUC21A0A0G2JKD1 596 aa9.53□□□□□ -0.88
CLCN6-206ENST00000376496 MUC21A0A140T8X8 626 aa9.53□□□□□ -0.88
CLCN6-206ENST00000376496 A0A1W2PS18 150 aa9.53□□□□□ -0.88
CLCN6-206ENST00000376496 CAMPP49913 170 aa9.53□□□□□ -0.88
CLCN6-206ENST00000376496 SMUG1Q53HV7 270 aa9.53□□□□□ -0.88
CLCN6-206ENST00000376496 MUC21Q5SSG8 566 aa9.53□□□□□ -0.88
CLCN6-206ENST00000376496 KLHL30-AS1Q8NEE0 82 aa9.53□□□□□ -0.88
CLCN6-206ENST00000376496 OR11H1Q8NG94 326 aa9.53□□□□□ -0.88
CLCN6-206ENST00000376496 TSKUQ8WUA8 353 aa9.53□□□□□ -0.88
CLCN6-206ENST00000376496 SMIM12Q96EX1 92 aa9.53□□□□□ -0.88
CLCN6-206ENST00000376496 TPPP3Q9BW30 176 aa9.53□□□□□ -0.88
CLCN6-206ENST00000376496 INAFM1C9JVW0 142 aa9.53□□□□□ -0.88
CLCN6-206ENST00000376496 SOCS3O14543 225 aa9.53□□□□□ -0.88
CLCN6-206ENST00000376496 SH2D1AO60880 128 aa9.53□□□□□ -0.88
CLCN6-206ENST00000376496 GDF5OSQ5U4N7 250 aa9.53□□□□□ -0.88
CLCN6-206ENST00000376496 RNF152Q8N8N0 203 aa9.53□□□□□ -0.88
CLCN6-206ENST00000376496 MRPL18Q9H0U6 180 aaKnown RBP9.53□□□□□ -0.88
CLCN6-206ENST00000376496 NRN1Q9NPD7 142 aa9.53□□□□□ -0.88
CLCN6-206ENST00000376496 TRBV6-1A0A0K0K1D8 114 aa9.52□□□□□ -0.88
CLCN6-206ENST00000376496 GRIFINA4D1Z8 144 aa9.52□□□□□ -0.88
CLCN6-206ENST00000376496 IZUMO1RA6ND01 250 aa9.52□□□□□ -0.88
CLCN6-206ENST00000376496 CD28P10747 220 aa9.52□□□□□ -0.88
CLCN6-206ENST00000376496 SSBP4Q9BWG4 385 aaPredicted RBP9.52□□□□□ -0.88
CLCN6-206ENST00000376496 NSD1Q96L73 2696 aaPredicted RBP9.52□□□□□ -0.88
CLCN6-206ENST00000376496 CT45A10P0DMU9 189 aa9.52□□□□□ -0.89
CLCN6-206ENST00000376496 WFDC12Q8WWY7 111 aa9.52□□□□□ -0.89
CLCN6-206ENST00000376496 UFC1Q9Y3C8 167 aa9.52□□□□□ -0.89
CLCN6-206ENST00000376496 NIPBLQ6KC79 2804 aaeCLIP9.52□□□□□ -0.89
CLCN6-206ENST00000376496 NAT8BQ9UHF3 227 aa9.52□□□□□ -0.89
CLCN6-206ENST00000376496 IFITM10A6NMD0 228 aa9.51□□□□□ -0.89
CLCN6-206ENST00000376496 K7EMT4 169 aa9.51□□□□□ -0.89
CLCN6-206ENST00000376496 ADAMTSL5Q6ZMM2 481 aa9.51□□□□□ -0.89
CLCN6-206ENST00000376496 TMEM136Q6ZRR5 245 aa9.51□□□□□ -0.89
CLCN6-206ENST00000376496 LINC01006Q8NI28 216 aa9.51□□□□□ -0.89
CLCN6-206ENST00000376496 XKRY2A2RUG3 117 aa9.51□□□□□ -0.89
CLCN6-206ENST00000376496 NPIPB6E9PJ23 425 aa9.51□□□□□ -0.89
CLCN6-206ENST00000376496 SERTM2A0A1B0GWG4 89 aa9.5□□□□□ -0.89
CLCN6-206ENST00000376496 A8MWL6 223 aa9.5□□□□□ -0.89
CLCN6-206ENST00000376496 UBE2CO00762 179 aa9.5□□□□□ -0.89
CLCN6-206ENST00000376496 RNASE1P07998 156 aaKnown RBP9.5□□□□□ -0.89
CLCN6-206ENST00000376496 CD33P20138 364 aa9.5□□□□□ -0.89
CLCN6-206ENST00000376496 CDX1P47902 265 aaPredicted RBP9.5□□□□□ -0.89
CLCN6-206ENST00000376496 ZNF418Q8TF45 676 aaPredicted RBP9.5□□□□□ -0.89
CLCN6-206ENST00000376496 AGRNO00468 2067 aa9.5□□□□□ -0.89
CLCN6-206ENST00000376496 C2orf70A6NJV1 201 aa9.5□□□□□ -0.89
CLCN6-206ENST00000376496 KIR3DS1Q14943 382 aa9.5□□□□□ -0.89
CLCN6-206ENST00000376496 OR1N2Q8NGR9 330 aa9.5□□□□□ -0.89
CLCN6-206ENST00000376496 DPF1Q92782 380 aa9.5□□□□□ -0.89
CLCN6-206ENST00000376496 CITED2Q99967 270 aaPredicted RBP9.5□□□□□ -0.89
CLCN6-206ENST00000376496 TRAV9-1A0A075B6T8 112 aa9.49□□□□□ -0.89
CLCN6-206ENST00000376496 F2Z2F3 143 aa9.49□□□□□ -0.89
CLCN6-206ENST00000376496 ZNF688P0C7X2 276 aa9.49□□□□□ -0.89
CLCN6-206ENST00000376496 HILS1P60008 231 aa9.49□□□□□ -0.89
CLCN6-206ENST00000376496 HIST1H1AQ02539 215 aaPredicted RBP9.49□□□□□ -0.89
CLCN6-206ENST00000376496 KLF5Q13887 457 aaPredicted RBP9.49□□□□□ -0.89
CLCN6-206ENST00000376496 SAPCD1Q5SSQ6 148 aa9.49□□□□□ -0.89
CLCN6-206ENST00000376496 FAM162BQ5T6X4 162 aa9.49□□□□□ -0.89
CLCN6-206ENST00000376496 TMEM78Q5T7P6 136 aa9.49□□□□□ -0.89
CLCN6-206ENST00000376496 PRR9Q5T870 116 aa9.49□□□□□ -0.89
CLCN6-206ENST00000376496 WIPF2Q8TF74 440 aaPredicted RBP9.49□□□□□ -0.89
CLCN6-206ENST00000376496 DLX4Q92988 240 aaPredicted RBP9.49□□□□□ -0.89
CLCN6-206ENST00000376496 MS4A6AQ9H2W1 248 aa9.49□□□□□ -0.89
CLCN6-206ENST00000376496 HOXA5P20719 270 aa9.49□□□□□ -0.89
CLCN6-206ENST00000376496 SLAQ13239 276 aa9.49□□□□□ -0.89
CLCN6-206ENST00000376496 DCANP1Q8TF63 244 aa9.49□□□□□ -0.89
CLCN6-206ENST00000376496 LINC01619G3V211 115 aa9.49□□□□□ -0.89
CLCN6-206ENST00000376496 ZNF138P52744 262 aa9.49□□□□□ -0.89
CLCN6-206ENST00000376496 C4orf3Q8WVX3 66 aa9.49□□□□□ -0.89
CLCN6-206ENST00000376496 TMEM189A5PLL7 270 aa9.48□□□□□ -0.89
CLCN6-206ENST00000376496 ORM1P02763 201 aa9.48□□□□□ -0.89
CLCN6-206ENST00000376496 MEOX2P50222 304 aa9.48□□□□□ -0.89
CLCN6-206ENST00000376496 NDFIP1Q9BT67 221 aa9.48□□□□□ -0.89
CLCN6-206ENST00000376496 C11orf21Q9P2W6 132 aa9.48□□□□□ -0.89
CLCN6-206ENST00000376496 C2CD3Q4AC94 2353 aa9.48□□□□□ -0.89
CLCN6-206ENST00000376496 A8MWP6 167 aa9.48□□□□□ -0.89
CLCN6-206ENST00000376496 NUPR1O60356 82 aa9.48□□□□□ -0.89
CLCN6-206ENST00000376496 IGKV3-20P01619 116 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms