RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 CCDC144NLQ6NUI1 221 aa11.85□□□□□ -0.51
CCHCR1-201ENST00000376266 DUX4L9Q6RFH8 374 aaPredicted RBP11.85□□□□□ -0.51
CCHCR1-201ENST00000376266 CCL13Q99616 98 aa11.85□□□□□ -0.51
CCHCR1-201ENST00000376266 BPESC1Q9GZL8 116 aa11.85□□□□□ -0.51
CCHCR1-201ENST00000376266 C22orf46C9J442 243 aa11.84□□□□□ -0.51
CCHCR1-201ENST00000376266 HBDP02042 147 aa11.84□□□□□ -0.51
CCHCR1-201ENST00000376266 WFDC2Q14508 124 aa11.84□□□□□ -0.51
CCHCR1-201ENST00000376266 LYPD2Q6UXB3 125 aa11.84□□□□□ -0.51
CCHCR1-201ENST00000376266 PRELID3AQ96N28 172 aa11.84□□□□□ -0.51
CCHCR1-201ENST00000376266 SPANXB1Q9NS25 103 aaPredicted RBP11.84□□□□□ -0.51
CCHCR1-201ENST00000376266 GATD1Q8NB37 220 aa11.84□□□□□ -0.51
CCHCR1-201ENST00000376266 MRPL20Q9BYC9 149 aaKnown RBP11.84□□□□□ -0.51
CCHCR1-201ENST00000376266 INS-IGF2F8WCM5 200 aa11.83□□□□□ -0.52
CCHCR1-201ENST00000376266 EXOC3-AS1Q8N2X6 119 aa11.83□□□□□ -0.52
CCHCR1-201ENST00000376266 C10orf105Q8TEF2 133 aa11.83□□□□□ -0.52
CCHCR1-201ENST00000376266 WFDC12Q8WWY7 111 aa11.83□□□□□ -0.52
CCHCR1-201ENST00000376266 OTORQ9NRC9 128 aa11.83□□□□□ -0.52
CCHCR1-201ENST00000376266 DKK2Q9UBU2 259 aa11.83□□□□□ -0.52
CCHCR1-201ENST00000376266 IGHV4-30-2A0A087WSY4 118 aa11.83□□□□□ -0.52
CCHCR1-201ENST00000376266 F8W1H4 67 aa11.83□□□□□ -0.52
CCHCR1-201ENST00000376266 IGLV2-11P01706 119 aa11.83□□□□□ -0.52
CCHCR1-201ENST00000376266 LRRC75A-AS1Q8N1F1 130 aa11.83□□□□□ -0.52
CCHCR1-201ENST00000376266 FAM216BQ8N7L0 139 aa11.83□□□□□ -0.52
CCHCR1-201ENST00000376266 C18orf15Q96N68 181 aa11.83□□□□□ -0.52
CCHCR1-201ENST00000376266 ASCL2Q99929 193 aa11.83□□□□□ -0.52
CCHCR1-201ENST00000376266 CGB1A6NKQ9 187 aa11.82□□□□□ -0.52
CCHCR1-201ENST00000376266 TNFRSF13BO14836 293 aaPredicted RBP11.82□□□□□ -0.52
CCHCR1-201ENST00000376266 RUSC1-AS1Q66K80 236 aa11.82□□□□□ -0.52
CCHCR1-201ENST00000376266 FOXI2Q6ZQN5 318 aa11.82□□□□□ -0.52
CCHCR1-201ENST00000376266 WFDC3Q8IUB2 231 aa11.82□□□□□ -0.52
CCHCR1-201ENST00000376266 GAFA1Q96PS6 74 aa11.82□□□□□ -0.52
CCHCR1-201ENST00000376266 SPATA25Q9BR10 227 aa11.82□□□□□ -0.52
CCHCR1-201ENST00000376266 NHP2Q9NX24 153 aaKnown RBP11.82□□□□□ -0.52
CCHCR1-201ENST00000376266 PLXNB1O43157 2135 aa11.82□□□□□ -0.52
CCHCR1-201ENST00000376266 PIMREGQ9BSJ6 248 aa11.82□□□□□ -0.52
CCHCR1-201ENST00000376266 RPUSD1Q9UJJ7 312 aaKnown RBP11.82□□□□□ -0.52
CCHCR1-201ENST00000376266 ZNF785A8K8V0 405 aa11.81□□□□□ -0.52
CCHCR1-201ENST00000376266 CT45A10P0DMU9 189 aa11.81□□□□□ -0.52
CCHCR1-201ENST00000376266 ORMDL3Q8N138 153 aa11.81□□□□□ -0.52
CCHCR1-201ENST00000376266 SPAG8Q99932 426 aaPredicted RBP11.81□□□□□ -0.52
CCHCR1-201ENST00000376266 CHAC1Q9BUX1 264 aa11.81□□□□□ -0.52
CCHCR1-201ENST00000376266 PRRC2AP48634 2157 aaKnown RBP11.81□□□□□ -0.52
CCHCR1-201ENST00000376266 SH2D6Q7Z4S9 175 aa11.81□□□□□ -0.52
CCHCR1-201ENST00000376266 TMEM167AQ8TBQ9 72 aa11.81□□□□□ -0.52
CCHCR1-201ENST00000376266 TTTY13Q9BZ97 58 aa11.81□□□□□ -0.52
CCHCR1-201ENST00000376266 CTSZQ9UBR2 303 aa11.81□□□□□ -0.52
CCHCR1-201ENST00000376266 MED13LQ71F56 2210 aa11.8□□□□□ -0.52
CCHCR1-201ENST00000376266 IGHV3-21A0A0B4J1V1 117 aa11.8□□□□□ -0.52
CCHCR1-201ENST00000376266 A0A1W2PRD5 423 aa11.8□□□□□ -0.52
CCHCR1-201ENST00000376266 A0A1W2PRF3 423 aa11.8□□□□□ -0.52
CCHCR1-201ENST00000376266 A0A1W2PRM7 423 aa11.8□□□□□ -0.52
CCHCR1-201ENST00000376266 FCN3O75636 299 aa11.8□□□□□ -0.52
CCHCR1-201ENST00000376266 PRB4P10163 310 aaPredicted RBP11.8□□□□□ -0.52
CCHCR1-201ENST00000376266 ETDBQ3ZM63 59 aa11.8□□□□□ -0.52
CCHCR1-201ENST00000376266 HCP5Q6MZN7 132 aa11.8□□□□□ -0.52
CCHCR1-201ENST00000376266 AMN1Q8IY45 258 aa11.8□□□□□ -0.52
CCHCR1-201ENST00000376266 C8orf46Q8TAG6 207 aa11.8□□□□□ -0.52
CCHCR1-201ENST00000376266 TRGV9Q99603 122 aa11.8□□□□□ -0.52
CCHCR1-201ENST00000376266 HIGD1BQ9P298 99 aa11.8□□□□□ -0.52
CCHCR1-201ENST00000376266 SETXQ7Z333 2677 aaKnown RBP11.8□□□□□ -0.52
CCHCR1-201ENST00000376266 TRAV26-1A0A087WT03 109 aa11.8□□□□□ -0.52
CCHCR1-201ENST00000376266 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.8□□□□□ -0.52
CCHCR1-201ENST00000376266 SLC25A17O43808 307 aa11.8□□□□□ -0.52
CCHCR1-201ENST00000376266 TMEM155Q4W5P6 130 aa11.8□□□□□ -0.52
CCHCR1-201ENST00000376266 ZNF493Q6ZR52 646 aa11.8□□□□□ -0.52
CCHCR1-201ENST00000376266 OR10X1Q8NGY0 326 aa11.8□□□□□ -0.52
CCHCR1-201ENST00000376266 PHLDA1Q8WV24 401 aaPredicted RBP11.8□□□□□ -0.52
CCHCR1-201ENST00000376266 IGKV2D-26A0A0A0MRZ7 120 aa11.79□□□□□ -0.52
CCHCR1-201ENST00000376266 TMEM213A2RRL7 107 aa11.79□□□□□ -0.52
CCHCR1-201ENST00000376266 DSCR9P59020 149 aa11.79□□□□□ -0.52
CCHCR1-201ENST00000376266 FAM104BQ5XKR9 115 aa11.79□□□□□ -0.52
CCHCR1-201ENST00000376266 Q6AWC8 147 aa11.79□□□□□ -0.52
CCHCR1-201ENST00000376266 ZNF833PQ6ZTB9 187 aa11.79□□□□□ -0.52
CCHCR1-201ENST00000376266 KRTAP1-3Q8IUG1 177 aa11.79□□□□□ -0.52
CCHCR1-201ENST00000376266 ARPC1AQ92747 370 aa11.79□□□□□ -0.52
CCHCR1-201ENST00000376266 HIGD1AQ9Y241 93 aa11.79□□□□□ -0.52
CCHCR1-201ENST00000376266 ZNF469Q96JG9 3925 aaPredicted RBP11.79□□□□□ -0.52
CCHCR1-201ENST00000376266 SVEP1Q4LDE5 3571 aa11.79□□□□□ -0.52
CCHCR1-201ENST00000376266 ABCA1O95477 2261 aa11.79□□□□□ -0.52
CCHCR1-201ENST00000376266 AKAP9Q99996 3911 aa11.79□□□□□ -0.52
CCHCR1-201ENST00000376266 K7EQM0 130 aa11.79□□□□□ -0.52
CCHCR1-201ENST00000376266 KAAG1Q9UBP8 84 aa11.79□□□□□ -0.52
CCHCR1-201ENST00000376266 U3KQK5 164 aa11.79□□□□□ -0.52
CCHCR1-201ENST00000376266 IGHV4-61A0A0C4DH41 118 aa11.78□□□□□ -0.52
CCHCR1-201ENST00000376266 H3BMG7 143 aa11.78□□□□□ -0.52
CCHCR1-201ENST00000376266 E9PLD3 99 aa11.78□□□□□ -0.52
CCHCR1-201ENST00000376266 K7EMI3 77 aa11.78□□□□□ -0.52
CCHCR1-201ENST00000376266 CRYBA4P53673 196 aa11.78□□□□□ -0.52
CCHCR1-201ENST00000376266 LYZP61626 148 aa11.78□□□□□ -0.52
CCHCR1-201ENST00000376266 LYZL1Q6UWQ5 148 aa11.78□□□□□ -0.52
CCHCR1-201ENST00000376266 OR4C13Q8NGP0 309 aa11.78□□□□□ -0.52
CCHCR1-201ENST00000376266 TMSB15BA0A087X1C1 80 aa11.77□□□□□ -0.52
CCHCR1-201ENST00000376266 A0A1W2PPI3 338 aa11.77□□□□□ -0.52
CCHCR1-201ENST00000376266 IGLL5B9A064 214 aa11.77□□□□□ -0.52
CCHCR1-201ENST00000376266 NDUFB3O43676 98 aa11.77□□□□□ -0.52
CCHCR1-201ENST00000376266 MRPL51Q4U2R6 128 aaKnown RBP11.77□□□□□ -0.52
CCHCR1-201ENST00000376266 TCTEX1D4Q5JR98 221 aa11.77□□□□□ -0.52
CCHCR1-201ENST00000376266 CEND1Q8N111 149 aa11.77□□□□□ -0.52
CCHCR1-201ENST00000376266 ZNF479Q96JC4 524 aa11.77□□□□□ -0.52
CCHCR1-201ENST00000376266 Q96MF0 132 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms