RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 Q8N1Y9 231 aa16.98■□□□□ 0.31
HLA-C-202ENST00000376237 CLUHP3Q96NS8 147 aa16.98■□□□□ 0.31
HLA-C-202ENST00000376237 PARLQ9H300 379 aa16.98■□□□□ 0.31
HLA-C-202ENST00000376237 PKD1L1Q8TDX9 2849 aa16.98■□□□□ 0.31
HLA-C-202ENST00000376237 KNCNA6PVL3 124 aa16.97■□□□□ 0.31
HLA-C-202ENST00000376237 H3BMM0 161 aa16.97■□□□□ 0.31
HLA-C-202ENST00000376237 IGLV2-11P01706 119 aa16.97■□□□□ 0.31
HLA-C-202ENST00000376237 PRB4P10163 310 aaPredicted RBP16.97■□□□□ 0.31
HLA-C-202ENST00000376237 ZNF138P52744 262 aa16.97■□□□□ 0.31
HLA-C-202ENST00000376237 ZNF124Q15973 351 aa16.97■□□□□ 0.31
HLA-C-202ENST00000376237 STHQ8IWL8 128 aa16.97■□□□□ 0.31
HLA-C-202ENST00000376237 PSG8Q9UQ74 426 aa16.97■□□□□ 0.31
HLA-C-202ENST00000376237 LENEPQ9Y5L5 61 aa16.97■□□□□ 0.31
HLA-C-202ENST00000376237 TRAV8-1A0A0A6YYK1 113 aa16.96■□□□□ 0.31
HLA-C-202ENST00000376237 TRAV34A0A0B4J273 112 aa16.96■□□□□ 0.31
HLA-C-202ENST00000376237 ERCC8Q13216 396 aa16.96■□□□□ 0.31
HLA-C-202ENST00000376237 FAM74A3Q4VXF1 159 aa16.96■□□□□ 0.31
HLA-C-202ENST00000376237 SOHLH1Q5JUK2 328 aa16.96■□□□□ 0.31
HLA-C-202ENST00000376237 KPRPQ5T749 579 aaPredicted RBP16.96■□□□□ 0.31
HLA-C-202ENST00000376237 PRR25Q96S07 402 aa16.96■□□□□ 0.31
HLA-C-202ENST00000376237 DERL1Q9BUN8 251 aa16.96■□□□□ 0.31
HLA-C-202ENST00000376237 ZNF492Q9P255 531 aa16.96■□□□□ 0.31
HLA-C-202ENST00000376237 SFTA3P0C7M3 94 aa16.96■□□□□ 0.3
HLA-C-202ENST00000376237 OR4B1Q8NGF8 309 aa16.96■□□□□ 0.3
HLA-C-202ENST00000376237 ZFP30Q9Y2G7 519 aa16.96■□□□□ 0.3
HLA-C-202ENST00000376237 TRBV7-9A0A0J9YWB2 115 aa16.95■□□□□ 0.3
HLA-C-202ENST00000376237 TMEM218A2RU14 115 aa16.95■□□□□ 0.3
HLA-C-202ENST00000376237 A8MTW9 85 aa16.95■□□□□ 0.3
HLA-C-202ENST00000376237 SAPCD1Q5SSQ6 148 aa16.95■□□□□ 0.3
HLA-C-202ENST00000376237 SLC7A5P1Q8MH63 180 aa16.95■□□□□ 0.3
HLA-C-202ENST00000376237 DEFB125Q8N687 156 aa16.95■□□□□ 0.3
HLA-C-202ENST00000376237 SGK494Q96LW2 274 aa16.95■□□□□ 0.3
HLA-C-202ENST00000376237 ODF3Q96PU9 254 aa16.95■□□□□ 0.3
HLA-C-202ENST00000376237 CITED4Q96RK1 184 aa16.95■□□□□ 0.3
HLA-C-202ENST00000376237 NDFIP1Q9BT67 221 aa16.95■□□□□ 0.3
HLA-C-202ENST00000376237 ZNF727A8MUV8 499 aa16.94■□□□□ 0.3
HLA-C-202ENST00000376237 ZNF674Q2M3X9 581 aa16.94■□□□□ 0.3
HLA-C-202ENST00000376237 PRNTQ86SH4 94 aa16.94■□□□□ 0.3
HLA-C-202ENST00000376237 SMIM7Q9BQ49 75 aa16.94■□□□□ 0.3
HLA-C-202ENST00000376237 WFDC10AQ9H1F0 79 aa16.94■□□□□ 0.3
HLA-C-202ENST00000376237 C9JCJ5 164 aa16.93■□□□□ 0.3
HLA-C-202ENST00000376237 CT45A10P0DMU9 189 aa16.93■□□□□ 0.3
HLA-C-202ENST00000376237 Q86TA4 180 aa16.93■□□□□ 0.3
HLA-C-202ENST00000376237 SMIM12Q96EX1 92 aa16.93■□□□□ 0.3
HLA-C-202ENST00000376237 LTAP01374 205 aa16.92■□□□□ 0.3
HLA-C-202ENST00000376237 GNG4P50150 75 aa16.92■□□□□ 0.3
HLA-C-202ENST00000376237 TRPT1Q86TN4 253 aaKnown RBP16.92■□□□□ 0.3
HLA-C-202ENST00000376237 BAGE2Q86Y30 109 aa16.92■□□□□ 0.3
HLA-C-202ENST00000376237 IGKV3-20P01619 116 aa16.91■□□□□ 0.3
HLA-C-202ENST00000376237 CENPWQ5EE01 88 aa16.91■□□□□ 0.3
HLA-C-202ENST00000376237 Q8TAT8 98 aa16.91■□□□□ 0.3
HLA-C-202ENST00000376237 FAM19A4Q96LR4 140 aa16.91■□□□□ 0.3
HLA-C-202ENST00000376237 IGF2BP2-AS1Q96M15 143 aa16.91■□□□□ 0.3
HLA-C-202ENST00000376237 TSPOP30536 169 aa16.91■□□□□ 0.3
HLA-C-202ENST00000376237 NUTF2P61970 127 aaKnown RBP16.91■□□□□ 0.3
HLA-C-202ENST00000376237 AMTNQ6UX39 209 aa16.91■□□□□ 0.3
HLA-C-202ENST00000376237 SRD5A3Q9H8P0 318 aa16.91■□□□□ 0.3
HLA-C-202ENST00000376237 TRBV20OR9-2A0A075B6H5 130 aa16.9■□□□□ 0.3
HLA-C-202ENST00000376237 LEPP41159 167 aa16.9■□□□□ 0.3
HLA-C-202ENST00000376237 TMEM183AQ8IXX5 376 aa16.9■□□□□ 0.3
HLA-C-202ENST00000376237 SEC11CQ9BY50 192 aa16.9■□□□□ 0.3
HLA-C-202ENST00000376237 LY96Q9Y6Y9 160 aa16.9■□□□□ 0.3
HLA-C-202ENST00000376237 F8W036 122 aa16.89■□□□□ 0.29
HLA-C-202ENST00000376237 CRISP2P16562 243 aa16.89■□□□□ 0.29
HLA-C-202ENST00000376237 COX8CQ7Z4L0 72 aa16.89■□□□□ 0.29
HLA-C-202ENST00000376237 TVP23CQ96ET8 276 aa16.89■□□□□ 0.29
HLA-C-202ENST00000376237 NIPSNAP3BQ9BS92 247 aa16.89■□□□□ 0.29
HLA-C-202ENST00000376237 MLST8Q9BVC4 326 aa16.89■□□□□ 0.29
HLA-C-202ENST00000376237 TUBA4BQ9H853 241 aa16.89■□□□□ 0.29
HLA-C-202ENST00000376237 MGAM2Q2M2H8 2515 aa16.89■□□□□ 0.29
HLA-C-202ENST00000376237 TMEM241Q24JQ0 296 aa16.88■□□□□ 0.29
HLA-C-202ENST00000376237 A8MZ25 164 aa16.87■□□□□ 0.29
HLA-C-202ENST00000376237 KRBOX1C9JBD0 128 aa16.87■□□□□ 0.29
HLA-C-202ENST00000376237 AMBPP02760 352 aa16.87■□□□□ 0.29
HLA-C-202ENST00000376237 CDKN1BP46527 198 aa16.87■□□□□ 0.29
HLA-C-202ENST00000376237 MORN3Q6PF18 240 aaPredicted RBP16.87■□□□□ 0.29
HLA-C-202ENST00000376237 NAT8Q9UHE5 227 aa16.87■□□□□ 0.29
HLA-C-202ENST00000376237 SMUG1Q53HV7 270 aa16.86■□□□□ 0.29
HLA-C-202ENST00000376237 LOC102724200A0A096LPH7 203 aaPredicted RBP16.86■□□□□ 0.29
HLA-C-202ENST00000376237 RBMY1BA6NDE4 496 aaKnown RBP16.86■□□□□ 0.29
HLA-C-202ENST00000376237 RBMY1EA6NEQ0 496 aaKnown RBP16.86■□□□□ 0.29
HLA-C-202ENST00000376237 RBMY1DP0C7P1 496 aaKnown RBP16.86■□□□□ 0.29
HLA-C-202ENST00000376237 IGHV4-30-4P0DP06 118 aa16.86■□□□□ 0.29
HLA-C-202ENST00000376237 ZFAND2AQ8N6M9 145 aa16.86■□□□□ 0.29
HLA-C-202ENST00000376237 BIN3Q9NQY0 253 aa16.86■□□□□ 0.29
HLA-C-202ENST00000376237 KLLNB2CW77 178 aa16.85■□□□□ 0.29
HLA-C-202ENST00000376237 GPX1P07203 203 aa16.85■□□□□ 0.29
HLA-C-202ENST00000376237 OCC1Q8TAD7 63 aa16.85■□□□□ 0.29
HLA-C-202ENST00000376237 ASCL2Q99929 193 aa16.85■□□□□ 0.29
HLA-C-202ENST00000376237 IGLV2-8P01709 118 aa16.84■□□□□ 0.29
HLA-C-202ENST00000376237 RPL35AP18077 110 aaKnown RBP16.84■□□□□ 0.29
HLA-C-202ENST00000376237 ADCYAP1P18509 176 aa16.84■□□□□ 0.29
HLA-C-202ENST00000376237 SPINK13Q1W4C9 94 aa16.84■□□□□ 0.29
HLA-C-202ENST00000376237 C10orf91Q5T1B1 145 aa16.84■□□□□ 0.29
HLA-C-202ENST00000376237 C8orf49Q96NF6 230 aa16.84■□□□□ 0.29
HLA-C-202ENST00000376237 C1QTNF4Q9BXJ3 329 aa16.84■□□□□ 0.29
HLA-C-202ENST00000376237 SDF2L1Q9HCN8 221 aa16.84■□□□□ 0.29
HLA-C-202ENST00000376237 KIR2DL5BA0A0G2JN68 375 aa16.83■□□□□ 0.28
HLA-C-202ENST00000376237 KIR2DL5BA0A0G2JPC4 375 aa16.83■□□□□ 0.28
HLA-C-202ENST00000376237 PNRC1Q12796 327 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms