RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 EIF5AL1Q6IS14 154 aaKnown RBP8.76□□□□□ -1.01
LSM2-208ENST00000375661 MORN3Q6PF18 240 aaPredicted RBP8.76□□□□□ -1.01
LSM2-208ENST00000375661 DPPA3Q6W0C5 159 aa8.76□□□□□ -1.01
LSM2-208ENST00000375661 LYPD1Q8N2G4 141 aa8.76□□□□□ -1.01
LSM2-208ENST00000375661 OR8A1Q8NGG7 326 aa8.76□□□□□ -1.01
LSM2-208ENST00000375661 FAM213BQ8TBF2 198 aa8.76□□□□□ -1.01
LSM2-208ENST00000375661 CLUHP3Q96NS8 147 aa8.76□□□□□ -1.01
LSM2-208ENST00000375661 MAP1LC3BQ9GZQ8 125 aa8.76□□□□□ -1.01
LSM2-208ENST00000375661 Q9H3A6 140 aa8.76□□□□□ -1.01
LSM2-208ENST00000375661 PRELID1Q9Y255 219 aa8.76□□□□□ -1.01
LSM2-208ENST00000375661 IGKV3-20P01619 116 aa8.75□□□□□ -1.01
LSM2-208ENST00000375661 CNN1P51911 297 aaKnown RBP8.75□□□□□ -1.01
LSM2-208ENST00000375661 AMTNQ6UX39 209 aa8.75□□□□□ -1.01
LSM2-208ENST00000375661 OR4B1Q8NGF8 309 aa8.75□□□□□ -1.01
LSM2-208ENST00000375661 AAMDCQ9H7C9 122 aa8.75□□□□□ -1.01
LSM2-208ENST00000375661 TMEM167BQ9NRX6 74 aa8.75□□□□□ -1.01
LSM2-208ENST00000375661 IGHV4-28A0A0C4DH34 117 aa8.74□□□□□ -1.01
LSM2-208ENST00000375661 PGPA6NDG6 321 aa8.74□□□□□ -1.01
LSM2-208ENST00000375661 PRSS29PA6NIE9 313 aa8.74□□□□□ -1.01
LSM2-208ENST00000375661 ZNF705EA8MWA4 302 aaPredicted RBP8.74□□□□□ -1.01
LSM2-208ENST00000375661 DUSP14O95147 198 aaKnown RBP8.74□□□□□ -1.01
LSM2-208ENST00000375661 AMBPP02760 352 aa8.74□□□□□ -1.01
LSM2-208ENST00000375661 RBMY1A1P0DJD3 496 aaKnown RBP8.74□□□□□ -1.01
LSM2-208ENST00000375661 RBMY1CP0DJD4 496 aa8.74□□□□□ -1.01
LSM2-208ENST00000375661 P0DMU3 169 aa8.74□□□□□ -1.01
LSM2-208ENST00000375661 FAM231AP0DMU4 169 aa8.74□□□□□ -1.01
LSM2-208ENST00000375661 FAM231CP0DMU5 169 aa8.74□□□□□ -1.01
LSM2-208ENST00000375661 RAB5CP51148 216 aa8.74□□□□□ -1.01
LSM2-208ENST00000375661 HIST1H1AQ02539 215 aaPredicted RBP8.74□□□□□ -1.01
LSM2-208ENST00000375661 RBMY1FQ15415 496 aaKnown RBP8.74□□□□□ -1.01
LSM2-208ENST00000375661 FAM74A1Q5RGS3 127 aa8.74□□□□□ -1.01
LSM2-208ENST00000375661 POM121L12Q8N7R1 296 aa8.74□□□□□ -1.01
LSM2-208ENST00000375661 OTORQ9NRC9 128 aa8.74□□□□□ -1.01
LSM2-208ENST00000375661 H2AFB1P0C5Y9 115 aa8.73□□□□□ -1.01
LSM2-208ENST00000375661 FXYD7P58549 80 aa8.73□□□□□ -1.01
LSM2-208ENST00000375661 ALKAL2Q6UX46 152 aa8.73□□□□□ -1.01
LSM2-208ENST00000375661 Q6ZTC4 211 aa8.73□□□□□ -1.01
LSM2-208ENST00000375661 IQCF2Q8IXL9 164 aa8.73□□□□□ -1.01
LSM2-208ENST00000375661 SFT2D1Q8WV19 159 aa8.73□□□□□ -1.01
LSM2-208ENST00000375661 SLC35B3Q9H1N7 401 aa8.73□□□□□ -1.01
LSM2-208ENST00000375661 RYR1P21817 5038 aa8.72□□□□□ -1.01
LSM2-208ENST00000375661 IGKV2-40A0A087WW87 121 aaPredicted RBP8.72□□□□□ -1.01
LSM2-208ENST00000375661 A0A1B0GV50 99 aa8.72□□□□□ -1.01
LSM2-208ENST00000375661 A0A1W2PRE2 83 aa8.72□□□□□ -1.01
LSM2-208ENST00000375661 DIRC3C9JPN6 131 aa8.72□□□□□ -1.01
LSM2-208ENST00000375661 NPIPB6E9PJ23 425 aa8.72□□□□□ -1.01
LSM2-208ENST00000375661 IGKV2D-40P01614 121 aaPredicted RBP8.72□□□□□ -1.01
LSM2-208ENST00000375661 LGALS9BQ3B8N2 356 aa8.72□□□□□ -1.01
LSM2-208ENST00000375661 CSNK1G2-AS1Q8NCQ2 148 aa8.72□□□□□ -1.01
LSM2-208ENST00000375661 AGPAT4-IT1Q9H0P7 198 aa8.72□□□□□ -1.01
LSM2-208ENST00000375661 YTHDF2Q9Y5A9 579 aaKnown RBP8.72□□□□□ -1.01
LSM2-208ENST00000375661 TRAV1-1A0A0B4J248 108 aa8.71□□□□□ -1.02
LSM2-208ENST00000375661 FAM74A7A6NL05 159 aa8.71□□□□□ -1.02
LSM2-208ENST00000375661 GGTLC3B5MD39 225 aa8.71□□□□□ -1.02
LSM2-208ENST00000375661 RTL8CO15255 209 aa8.71□□□□□ -1.02
LSM2-208ENST00000375661 CT45A10P0DMU9 189 aa8.71□□□□□ -1.02
LSM2-208ENST00000375661 CSN1S1P47710 185 aa8.71□□□□□ -1.02
LSM2-208ENST00000375661 UBE2G2P60604 165 aa8.71□□□□□ -1.02
LSM2-208ENST00000375661 NUTF2P61970 127 aaKnown RBP8.71□□□□□ -1.02
LSM2-208ENST00000375661 SUMO1P63165 101 aaKnown RBP8.71□□□□□ -1.02
LSM2-208ENST00000375661 GNG5P63218 68 aa8.71□□□□□ -1.02
LSM2-208ENST00000375661 CCL20P78556 96 aa8.71□□□□□ -1.02
LSM2-208ENST00000375661 ERCC8Q13216 396 aa8.71□□□□□ -1.02
LSM2-208ENST00000375661 OR10J6PQ8NGY7 276 aa8.71□□□□□ -1.02
LSM2-208ENST00000375661 RXFP4Q8TDU9 374 aa8.71□□□□□ -1.02
LSM2-208ENST00000375661 VGLL1Q99990 258 aa8.71□□□□□ -1.02
LSM2-208ENST00000375661 NDUFAF3Q9BU61 184 aa8.71□□□□□ -1.02
LSM2-208ENST00000375661 XCL2Q9UBD3 114 aa8.71□□□□□ -1.02
LSM2-208ENST00000375661 X6R8D5 127 aa8.71□□□□□ -1.02
LSM2-208ENST00000375661 PKHD1P08F94 4074 aa8.71□□□□□ -1.02
LSM2-208ENST00000375661 DEFB131BA0A096LNP1 70 aa8.7□□□□□ -1.02
LSM2-208ENST00000375661 CRXO43186 299 aaPredicted RBP8.7□□□□□ -1.02
LSM2-208ENST00000375661 SPINK13Q1W4C9 94 aa8.7□□□□□ -1.02
LSM2-208ENST00000375661 C9orf47Q6ZRZ4 202 aa8.7□□□□□ -1.02
LSM2-208ENST00000375661 ARL6IP6Q8N6S5 226 aa8.7□□□□□ -1.02
LSM2-208ENST00000375661 LINC00477Q96M19 166 aa8.7□□□□□ -1.02
LSM2-208ENST00000375661 M0R2Z0 102 aa8.69□□□□□ -1.02
LSM2-208ENST00000375661 SLC25A5P05141 298 aaKnown RBP8.69□□□□□ -1.02
LSM2-208ENST00000375661 KIR3DS1Q14943 382 aa8.69□□□□□ -1.02
LSM2-208ENST00000375661 C12orf74Q32Q52 190 aa8.69□□□□□ -1.02
LSM2-208ENST00000375661 CCDC28AQ8IWP9 274 aa8.69□□□□□ -1.02
LSM2-208ENST00000375661 C5orf17Q8NAS9 161 aa8.69□□□□□ -1.02
LSM2-208ENST00000375661 CMTM2Q8TAZ6 248 aa8.69□□□□□ -1.02
LSM2-208ENST00000375661 FAM19A4Q96LR4 140 aa8.69□□□□□ -1.02
LSM2-208ENST00000375661 EPDR1Q9UM22 224 aa8.69□□□□□ -1.02
LSM2-208ENST00000375661 RPH3ALQ9UNE2 315 aa8.69□□□□□ -1.02
LSM2-208ENST00000375661 FAT2Q9NYQ8 4349 aa8.68□□□□□ -1.02
LSM2-208ENST00000375661 TRAV12-2A0A075B6T6 113 aa8.68□□□□□ -1.02
LSM2-208ENST00000375661 RBAKDNA6NC62 111 aa8.68□□□□□ -1.02
LSM2-208ENST00000375661 PAGE4O60829 102 aa8.68□□□□□ -1.02
LSM2-208ENST00000375661 HBE1P02100 147 aa8.68□□□□□ -1.02
LSM2-208ENST00000375661 TCRAP04437 139 aa8.68□□□□□ -1.02
LSM2-208ENST00000375661 C1orf158Q8N1D5 194 aa8.68□□□□□ -1.02
LSM2-208ENST00000375661 ODF3Q96PU9 254 aa8.68□□□□□ -1.02
LSM2-208ENST00000375661 C1QTNF4Q9BXJ3 329 aa8.68□□□□□ -1.02
LSM2-208ENST00000375661 PPP1R14DQ9NXH3 145 aa8.68□□□□□ -1.02
LSM2-208ENST00000375661 ZNF492Q9P255 531 aa8.68□□□□□ -1.02
LSM2-208ENST00000375661 ARL2-SNX15V9GYD0 113 aa8.68□□□□□ -1.02
LSM2-208ENST00000375661 CDKN1BP46527 198 aa8.67□□□□□ -1.02
LSM2-208ENST00000375661 ATP5G3P48201 142 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms