RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 C2orf83Q53S99 150 aa13.64□□□□□ -0.23
LDLRAP1-201ENST00000374338 PDPNQ86YL7 162 aa13.64□□□□□ -0.23
LDLRAP1-201ENST00000374338 OSR1Q8TAX0 266 aaPredicted RBP13.64□□□□□ -0.23
LDLRAP1-201ENST00000374338 DAZAP1Q96EP5 407 aaKnown RBP13.64□□□□□ -0.23
LDLRAP1-201ENST00000374338 RAXQ9Y2V3 346 aa13.64□□□□□ -0.23
LDLRAP1-201ENST00000374338 A0A1B0GWB2 263 aa13.64□□□□□ -0.23
LDLRAP1-201ENST00000374338 TNFRSF13BO14836 293 aaPredicted RBP13.64□□□□□ -0.23
LDLRAP1-201ENST00000374338 GAGE5Q13069 117 aa13.64□□□□□ -0.23
LDLRAP1-201ENST00000374338 GAGE6Q13070 117 aa13.64□□□□□ -0.23
LDLRAP1-201ENST00000374338 ZNF492Q9P255 531 aa13.64□□□□□ -0.23
LDLRAP1-201ENST00000374338 OVOL3O00110 214 aa13.63□□□□□ -0.23
LDLRAP1-201ENST00000374338 CRYGCP07315 174 aa13.63□□□□□ -0.23
LDLRAP1-201ENST00000374338 ARMS2P0C7Q2 107 aa13.63□□□□□ -0.23
LDLRAP1-201ENST00000374338 PPIFP30405 207 aaKnown RBP13.63□□□□□ -0.23
LDLRAP1-201ENST00000374338 ONECUT1Q9UBC0 465 aa13.63□□□□□ -0.23
LDLRAP1-201ENST00000374338 IGKV2D-26A0A0A0MRZ7 120 aa13.63□□□□□ -0.23
LDLRAP1-201ENST00000374338 TRBV7-9A0A0J9YWB2 115 aa13.63□□□□□ -0.23
LDLRAP1-201ENST00000374338 APOMO95445 188 aa13.63□□□□□ -0.23
LDLRAP1-201ENST00000374338 XGP55808 180 aa13.63□□□□□ -0.23
LDLRAP1-201ENST00000374338 FOXI1Q12951 378 aa13.63□□□□□ -0.23
LDLRAP1-201ENST00000374338 KLRD1Q13241 179 aa13.63□□□□□ -0.23
LDLRAP1-201ENST00000374338 KLF17Q5JT82 389 aaPredicted RBP13.63□□□□□ -0.23
LDLRAP1-201ENST00000374338 LINC00574Q9H8X3 128 aa13.63□□□□□ -0.23
LDLRAP1-201ENST00000374338 DKK2Q9UBU2 259 aa13.63□□□□□ -0.23
LDLRAP1-201ENST00000374338 IGKV1D-37A0A075B6S9 117 aa13.63□□□□□ -0.23
LDLRAP1-201ENST00000374338 DLL1O00548 723 aa13.63□□□□□ -0.23
LDLRAP1-201ENST00000374338 CCL21O00585 134 aa13.63□□□□□ -0.23
LDLRAP1-201ENST00000374338 COL8A1P27658 744 aa13.63□□□□□ -0.23
LDLRAP1-201ENST00000374338 C3orf36Q3SXR2 165 aa13.63□□□□□ -0.23
LDLRAP1-201ENST00000374338 Q6ZUT4 128 aa13.63□□□□□ -0.23
LDLRAP1-201ENST00000374338 TM2D2Q9BX73 214 aa13.63□□□□□ -0.23
LDLRAP1-201ENST00000374338 B5MCH6 92 aa13.62□□□□□ -0.23
LDLRAP1-201ENST00000374338 MRGPRG-AS1Q2M3A8 158 aa13.62□□□□□ -0.23
LDLRAP1-201ENST00000374338 CD3EP07766 207 aa13.62□□□□□ -0.23
LDLRAP1-201ENST00000374338 NBL1P41271 181 aa13.62□□□□□ -0.23
LDLRAP1-201ENST00000374338 FHL3Q13643 280 aa13.62□□□□□ -0.23
LDLRAP1-201ENST00000374338 CEND1Q8N111 149 aa13.62□□□□□ -0.23
LDLRAP1-201ENST00000374338 AGRNO00468 2067 aa13.61□□□□□ -0.23
LDLRAP1-201ENST00000374338 PLGLAQ15195 96 aa13.61□□□□□ -0.23
LDLRAP1-201ENST00000374338 TMEM155Q4W5P6 130 aa13.61□□□□□ -0.23
LDLRAP1-201ENST00000374338 ANAPC13Q9BS18 74 aa13.61□□□□□ -0.23
LDLRAP1-201ENST00000374338 TMEM133Q9H2Q1 129 aa13.61□□□□□ -0.23
LDLRAP1-201ENST00000374338 DLX6P56179 175 aa13.61□□□□□ -0.23
LDLRAP1-201ENST00000374338 PRNTQ86SH4 94 aa13.61□□□□□ -0.23
LDLRAP1-201ENST00000374338 FSTL3O95633 263 aa13.6□□□□□ -0.23
LDLRAP1-201ENST00000374338 CT45A10P0DMU9 189 aa13.6□□□□□ -0.23
LDLRAP1-201ENST00000374338 EXOC3-AS1Q8N2X6 119 aa13.6□□□□□ -0.23
LDLRAP1-201ENST00000374338 FAM110AQ9BQ89 295 aa13.6□□□□□ -0.23
LDLRAP1-201ENST00000374338 FLNCQ14315 2725 aa13.6□□□□□ -0.23
LDLRAP1-201ENST00000374338 A0A1B0GUT8 65 aa13.6□□□□□ -0.23
LDLRAP1-201ENST00000374338 TMEM167AQ8TBQ9 72 aa13.6□□□□□ -0.23
LDLRAP1-201ENST00000374338 IFI27L1Q96BM0 104 aa13.6□□□□□ -0.23
LDLRAP1-201ENST00000374338 TRBV25-1A0A075B6N4 114 aa13.6□□□□□ -0.23
LDLRAP1-201ENST00000374338 TMSB15BA0A087X1C1 80 aa13.59□□□□□ -0.23
LDLRAP1-201ENST00000374338 NDUFS7O75251 213 aa13.59□□□□□ -0.23
LDLRAP1-201ENST00000374338 SRSF12Q8WXF0 261 aaKnown RBP13.59□□□□□ -0.23
LDLRAP1-201ENST00000374338 SSUH2Q9Y2M2 353 aa13.59□□□□□ -0.23
LDLRAP1-201ENST00000374338 UFC1Q9Y3C8 167 aa13.59□□□□□ -0.23
LDLRAP1-201ENST00000374338 K7ENP7 123 aa13.59□□□□□ -0.23
LDLRAP1-201ENST00000374338 IGHV3OR16-8A0A075B7F1 116 aa13.58□□□□□ -0.24
LDLRAP1-201ENST00000374338 C12orf74Q32Q52 190 aa13.58□□□□□ -0.24
LDLRAP1-201ENST00000374338 C1orf122Q6ZSJ8 110 aa13.58□□□□□ -0.24
LDLRAP1-201ENST00000374338 VSTM5A8MXK1 200 aa13.58□□□□□ -0.24
LDLRAP1-201ENST00000374338 VMA21Q3ZAQ7 101 aa13.58□□□□□ -0.24
LDLRAP1-201ENST00000374338 GOLT1AQ6ZVE7 132 aa13.58□□□□□ -0.24
LDLRAP1-201ENST00000374338 PIFOQ8TCI5 191 aa13.58□□□□□ -0.24
LDLRAP1-201ENST00000374338 C1QTNF4Q9BXJ3 329 aa13.58□□□□□ -0.24
LDLRAP1-201ENST00000374338 NFE4Q86UQ8 179 aa13.57□□□□□ -0.24
LDLRAP1-201ENST00000374338 PRELID3AQ96N28 172 aa13.57□□□□□ -0.24
LDLRAP1-201ENST00000374338 Q9H3A6 140 aa13.57□□□□□ -0.24
LDLRAP1-201ENST00000374338 HBDP02042 147 aa13.57□□□□□ -0.24
LDLRAP1-201ENST00000374338 GLMPQ8WWB7 406 aa13.57□□□□□ -0.24
LDLRAP1-201ENST00000374338 CACNG8Q8WXS5 425 aa13.57□□□□□ -0.24
LDLRAP1-201ENST00000374338 FMC1Q96HJ9 113 aa13.57□□□□□ -0.24
LDLRAP1-201ENST00000374338 IGHV1-3A0A0C4DH29 117 aa13.57□□□□□ -0.24
LDLRAP1-201ENST00000374338 IGHV3-23P01764 117 aa13.57□□□□□ -0.24
LDLRAP1-201ENST00000374338 RBP4P02753 201 aa13.57□□□□□ -0.24
LDLRAP1-201ENST00000374338 LYZP61626 148 aa13.57□□□□□ -0.24
LDLRAP1-201ENST00000374338 RIGQ13278 110 aa13.57□□□□□ -0.24
LDLRAP1-201ENST00000374338 ZNF672Q499Z4 452 aaPredicted RBP13.57□□□□□ -0.24
LDLRAP1-201ENST00000374338 CFAP46Q8IYW2 2715 aa13.56□□□□□ -0.24
LDLRAP1-201ENST00000374338 NPIPB5A8MRT5 1133 aa13.56□□□□□ -0.24
LDLRAP1-201ENST00000374338 SMKR1H3BMG3 65 aa13.56□□□□□ -0.24
LDLRAP1-201ENST00000374338 CNIH1O95406 144 aa13.56□□□□□ -0.24
LDLRAP1-201ENST00000374338 TCRAP04437 139 aa13.56□□□□□ -0.24
LDLRAP1-201ENST00000374338 RPL27AP46776 148 aaKnown RBP13.56□□□□□ -0.24
LDLRAP1-201ENST00000374338 ZFYVE26Q68DK2 2539 aa13.56□□□□□ -0.24
LDLRAP1-201ENST00000374338 RPEQ96AT9 228 aa13.56□□□□□ -0.24
LDLRAP1-201ENST00000374338 HHLA3Q9XRX5 114 aa13.56□□□□□ -0.24
LDLRAP1-201ENST00000374338 IGHV3-35A0A0C4DH35 117 aa13.56□□□□□ -0.24
LDLRAP1-201ENST00000374338 ZNF785A8K8V0 405 aa13.56□□□□□ -0.24
LDLRAP1-201ENST00000374338 BRI3O95415 125 aa13.56□□□□□ -0.24
LDLRAP1-201ENST00000374338 HES1Q14469 280 aa13.56□□□□□ -0.24
LDLRAP1-201ENST00000374338 GATD1Q8NB37 220 aa13.56□□□□□ -0.24
LDLRAP1-201ENST00000374338 NGBQ9NPG2 151 aa13.56□□□□□ -0.24
LDLRAP1-201ENST00000374338 WI2-2373I1.2A0A1W2PRP0 233 aa13.55□□□□□ -0.24
LDLRAP1-201ENST00000374338 RRN3P1Q2M238 152 aa13.55□□□□□ -0.24
LDLRAP1-201ENST00000374338 OR1L4Q8NGR5 311 aa13.55□□□□□ -0.24
LDLRAP1-201ENST00000374338 D6R8Y8 96 aa13.55□□□□□ -0.24
LDLRAP1-201ENST00000374338 BUB1B-PAK6H3BSN5 160 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms