RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 FAM120AOSQ5T036 256 aa13.8□□□□□ -0.2
PTPRU-202ENST00000373779 TEX29Q8N6K0 151 aa13.8□□□□□ -0.2
PTPRU-202ENST00000373779 SPTBN1Q01082 2364 aaKnown RBP13.8□□□□□ -0.2
PTPRU-202ENST00000373779 VGLL1Q99990 258 aa13.8□□□□□ -0.2
PTPRU-202ENST00000373779 GTSF1LQ9H1H1 148 aa13.8□□□□□ -0.2
PTPRU-202ENST00000373779 TMEM238C9JI98 176 aa13.8□□□□□ -0.2
PTPRU-202ENST00000373779 PEMTQ9UBM1 199 aa13.8□□□□□ -0.2
PTPRU-202ENST00000373779 INTS1Q8N201 2190 aaKnown RBP13.79□□□□□ -0.2
PTPRU-202ENST00000373779 FCN3O75636 299 aa13.79□□□□□ -0.2
PTPRU-202ENST00000373779 YAE1D1Q9NRH1 226 aa13.79□□□□□ -0.2
PTPRU-202ENST00000373779 ACACAQ13085 2346 aa13.79□□□□□ -0.2
PTPRU-202ENST00000373779 C22orf46C9J442 243 aa13.79□□□□□ -0.2
PTPRU-202ENST00000373779 H3BUX3 64 aa13.79□□□□□ -0.2
PTPRU-202ENST00000373779 UBE2E1P51965 193 aa13.79□□□□□ -0.2
PTPRU-202ENST00000373779 WT1P19544 449 aaPredicted RBP13.78□□□□□ -0.2
PTPRU-202ENST00000373779 CR1LQ2VPA4 569 aa13.78□□□□□ -0.2
PTPRU-202ENST00000373779 RHPN1-AS1Q9BWJ2 59 aa13.78□□□□□ -0.2
PTPRU-202ENST00000373779 PRSS22Q9GZN4 317 aa13.78□□□□□ -0.2
PTPRU-202ENST00000373779 GOLGB1Q14789 3259 aaKnown RBP13.78□□□□□ -0.2
PTPRU-202ENST00000373779 ZNF688P0C7X2 276 aa13.78□□□□□ -0.2
PTPRU-202ENST00000373779 IGKV3D-20A0A0C4DH25 116 aa13.78□□□□□ -0.2
PTPRU-202ENST00000373779 K7EP13 123 aa13.78□□□□□ -0.2
PTPRU-202ENST00000373779 CCL25O15444 150 aa13.78□□□□□ -0.2
PTPRU-202ENST00000373779 NDUFS7O75251 213 aa13.78□□□□□ -0.2
PTPRU-202ENST00000373779 LINC00173Q6ZV60 143 aa13.78□□□□□ -0.2
PTPRU-202ENST00000373779 C8orf86Q6ZUL3 223 aa13.77□□□□□ -0.2
PTPRU-202ENST00000373779 TRAV26-2A0A0B4J265 109 aa13.77□□□□□ -0.2
PTPRU-202ENST00000373779 DTX2Q86UW9 622 aa13.77□□□□□ -0.2
PTPRU-202ENST00000373779 PLEKHB2Q96CS7 222 aa13.77□□□□□ -0.2
PTPRU-202ENST00000373779 ARHGAP21Q5T5U3 1957 aa13.77□□□□□ -0.2
PTPRU-202ENST00000373779 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.77□□□□□ -0.21
PTPRU-202ENST00000373779 A0A1W2PNU3 283 aaPredicted RBP13.77□□□□□ -0.21
PTPRU-202ENST00000373779 SIVA1O15304 175 aa13.77□□□□□ -0.21
PTPRU-202ENST00000373779 RITA1Q96K30 269 aa13.77□□□□□ -0.21
PTPRU-202ENST00000373779 BPESC1Q9GZL8 116 aa13.77□□□□□ -0.21
PTPRU-202ENST00000373779 AKAP6Q13023 2319 aa13.77□□□□□ -0.21
PTPRU-202ENST00000373779 ZNF876PQ49A33 203 aa13.77□□□□□ -0.21
PTPRU-202ENST00000373779 G3V318 75 aa13.77□□□□□ -0.21
PTPRU-202ENST00000373779 DEFB125Q8N687 156 aa13.77□□□□□ -0.21
PTPRU-202ENST00000373779 A0A087WWL8 130 aa13.76□□□□□ -0.21
PTPRU-202ENST00000373779 C2orf66Q6UXQ4 117 aa13.76□□□□□ -0.21
PTPRU-202ENST00000373779 C10orf126Q8N4M7 172 aa13.76□□□□□ -0.21
PTPRU-202ENST00000373779 DKK2Q9UBU2 259 aa13.76□□□□□ -0.21
PTPRU-202ENST00000373779 A0A1W2PPM0 123 aa13.76□□□□□ -0.21
PTPRU-202ENST00000373779 OR13C6PQ8NH95 151 aa13.76□□□□□ -0.21
PTPRU-202ENST00000373779 PIP4P1Q86T03 277 aa13.76□□□□□ -0.21
PTPRU-202ENST00000373779 LY6DQ14210 128 aa13.75□□□□□ -0.21
PTPRU-202ENST00000373779 GTSF1Q8WW33 167 aa13.75□□□□□ -0.21
PTPRU-202ENST00000373779 CACNA1GO43497 2377 aa13.75□□□□□ -0.21
PTPRU-202ENST00000373779 INS-IGF2F8WCM5 200 aa13.75□□□□□ -0.21
PTPRU-202ENST00000373779 MRPL35Q9NZE8 188 aaKnown RBP13.75□□□□□ -0.21
PTPRU-202ENST00000373779 GTF3C1Q12789 2109 aa13.75□□□□□ -0.21
PTPRU-202ENST00000373779 I3L2K1 104 aa13.75□□□□□ -0.21
PTPRU-202ENST00000373779 EGR2P11161 476 aaPredicted RBP13.75□□□□□ -0.21
PTPRU-202ENST00000373779 EIF4EBP1Q13541 118 aaPredicted RBP13.75□□□□□ -0.21
PTPRU-202ENST00000373779 WNK2Q9Y3S1 2297 aa13.75□□□□□ -0.21
PTPRU-202ENST00000373779 USF3Q68DE3 2245 aa13.75□□□□□ -0.21
PTPRU-202ENST00000373779 PROP1O75360 226 aa13.74□□□□□ -0.21
PTPRU-202ENST00000373779 ANAPC13Q9BS18 74 aa13.74□□□□□ -0.21
PTPRU-202ENST00000373779 KLF12Q9Y4X4 402 aa13.74□□□□□ -0.21
PTPRU-202ENST00000373779 TRAV8-4A0A0B4J246 113 aa13.74□□□□□ -0.21
PTPRU-202ENST00000373779 SHISA9B4DS77 424 aa13.74□□□□□ -0.21
PTPRU-202ENST00000373779 PRSS33Q8NF86 280 aa13.74□□□□□ -0.21
PTPRU-202ENST00000373779 DAZ1Q9NQZ3 744 aaKnown RBP13.74□□□□□ -0.21
PTPRU-202ENST00000373779 SCGB1A1P11684 91 aa13.74□□□□□ -0.21
PTPRU-202ENST00000373779 LCNL1Q6ZST4 164 aa13.74□□□□□ -0.21
PTPRU-202ENST00000373779 ZNF503Q96F45 646 aa13.74□□□□□ -0.21
PTPRU-202ENST00000373779 RIF1Q5UIP0 2472 aaKnown RBP13.73□□□□□ -0.21
PTPRU-202ENST00000373779 IGHV2-70DA0A0C4DH43 119 aa13.73□□□□□ -0.21
PTPRU-202ENST00000373779 IGLV2-23P01705 113 aa13.73□□□□□ -0.21
PTPRU-202ENST00000373779 MSMPQ1L6U9 139 aa13.73□□□□□ -0.21
PTPRU-202ENST00000373779 Q5PR19 223 aa13.73□□□□□ -0.21
PTPRU-202ENST00000373779 OVOL3O00110 214 aa13.73□□□□□ -0.21
PTPRU-202ENST00000373779 LINC01545Q5VT33 79 aa13.73□□□□□ -0.21
PTPRU-202ENST00000373779 TOMM7Q9P0U1 55 aa13.73□□□□□ -0.21
PTPRU-202ENST00000373779 MYMXA0A1B0GTQ4 84 aa13.73□□□□□ -0.21
PTPRU-202ENST00000373779 C10orf142B7Z368 130 aa13.73□□□□□ -0.21
PTPRU-202ENST00000373779 SCRT2Q9NQ03 307 aa13.73□□□□□ -0.21
PTPRU-202ENST00000373779 TP53TG1Q9Y2A0 90 aa13.73□□□□□ -0.21
PTPRU-202ENST00000373779 E7EUB6 86 aa13.73□□□□□ -0.21
PTPRU-202ENST00000373779 HLA-DMBP28068 263 aa13.73□□□□□ -0.21
PTPRU-202ENST00000373779 IGHV3-73A0A0B4J1V6 119 aa13.72□□□□□ -0.21
PTPRU-202ENST00000373779 M0R2P5 195 aa13.72□□□□□ -0.21
PTPRU-202ENST00000373779 IGKV1-17P01599 117 aa13.72□□□□□ -0.21
PTPRU-202ENST00000373779 CEND1Q8N111 149 aa13.72□□□□□ -0.21
PTPRU-202ENST00000373779 EML6Q6ZMW3 1958 aa13.72□□□□□ -0.21
PTPRU-202ENST00000373779 NCKAP5O14513 1909 aa13.72□□□□□ -0.21
PTPRU-202ENST00000373779 RUSC1-AS1Q66K80 236 aa13.72□□□□□ -0.21
PTPRU-202ENST00000373779 K7EIM0 57 aa13.72□□□□□ -0.21
PTPRU-202ENST00000373779 SMIM2Q9BVW6 85 aa13.72□□□□□ -0.21
PTPRU-202ENST00000373779 MRPL36Q9P0J6 103 aaKnown RBP13.72□□□□□ -0.21
PTPRU-202ENST00000373779 RNASE1P07998 156 aaKnown RBP13.71□□□□□ -0.21
PTPRU-202ENST00000373779 DYNAPQ8N1N2 210 aa13.71□□□□□ -0.21
PTPRU-202ENST00000373779 K7ENP7 123 aa13.71□□□□□ -0.21
PTPRU-202ENST00000373779 SLC25A16P16260 332 aa13.71□□□□□ -0.21
PTPRU-202ENST00000373779 SEM1Q6ZVN7 128 aa13.71□□□□□ -0.21
PTPRU-202ENST00000373779 STHQ8IWL8 128 aa13.71□□□□□ -0.21
PTPRU-202ENST00000373779 CHD3Q12873 2000 aaKnown RBP13.7□□□□□ -0.22
PTPRU-202ENST00000373779 MED13Q9UHV7 2174 aa13.7□□□□□ -0.22
PTPRU-202ENST00000373779 CDKN1BP46527 198 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms