RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 OR10J3Q5JRS4 329 aa14.96□□□□□ -0.01
HDAC1-201ENST00000373548 FAM162BQ5T6X4 162 aa14.96□□□□□ -0.01
HDAC1-201ENST00000373548 A8MWP6 167 aa14.95□□□□□ -0.02
HDAC1-201ENST00000373548 ZNF80P51504 273 aaPredicted RBP14.95□□□□□ -0.02
HDAC1-201ENST00000373548 MRPL53Q96EL3 112 aaKnown RBP14.95□□□□□ -0.02
HDAC1-201ENST00000373548 ZNF702PQ9H963 129 aa14.95□□□□□ -0.02
HDAC1-201ENST00000373548 PEF1Q9UBV8 284 aaKnown RBP14.95□□□□□ -0.02
HDAC1-201ENST00000373548 TMEM89A2RUT3 159 aa14.95□□□□□ -0.02
HDAC1-201ENST00000373548 JOSD1Q15040 202 aaPredicted RBP14.95□□□□□ -0.02
HDAC1-201ENST00000373548 PRR31Q5SQ13 230 aa14.95□□□□□ -0.02
HDAC1-201ENST00000373548 GPHB5Q86YW7 130 aa14.94□□□□□ -0.02
HDAC1-201ENST00000373548 GSN-AS1Q9NRJ2 163 aa14.94□□□□□ -0.02
HDAC1-201ENST00000373548 MXRA5Q9NR99 2828 aa14.94□□□□□ -0.02
HDAC1-201ENST00000373548 HAX1O00165 279 aa14.93□□□□□ -0.02
HDAC1-201ENST00000373548 NDFIP1Q9BT67 221 aa14.93□□□□□ -0.02
HDAC1-201ENST00000373548 ITPR3Q14573 2671 aa14.93□□□□□ -0.02
HDAC1-201ENST00000373548 TMEM189A5PLL7 270 aa14.93□□□□□ -0.02
HDAC1-201ENST00000373548 S100A12P80511 92 aa14.93□□□□□ -0.02
HDAC1-201ENST00000373548 TM4SF20Q53R12 229 aa14.93□□□□□ -0.02
HDAC1-201ENST00000373548 C16orf92Q96LL3 132 aa14.93□□□□□ -0.02
HDAC1-201ENST00000373548 RCHY1Q96PM5 261 aa14.93□□□□□ -0.02
HDAC1-201ENST00000373548 AGPAT4-IT1Q9H0P7 198 aa14.93□□□□□ -0.02
HDAC1-201ENST00000373548 A0A1B0GUT8 65 aa14.92□□□□□ -0.02
HDAC1-201ENST00000373548 A0A1W2PS18 150 aa14.92□□□□□ -0.02
HDAC1-201ENST00000373548 ARMS2P0C7Q2 107 aa14.92□□□□□ -0.02
HDAC1-201ENST00000373548 DNLZQ5SXM8 178 aa14.92□□□□□ -0.02
HDAC1-201ENST00000373548 C18orf32Q8TCD1 76 aa14.92□□□□□ -0.02
HDAC1-201ENST00000373548 TMSB15BA0A087X1C1 80 aa14.92□□□□□ -0.02
HDAC1-201ENST00000373548 IGHV7-4-1A0A0J9YVY3 117 aa14.92□□□□□ -0.02
HDAC1-201ENST00000373548 ALKBH7Q9BT30 221 aaPredicted RBP14.92□□□□□ -0.02
HDAC1-201ENST00000373548 DAZ1Q9NQZ3 744 aaKnown RBP14.92□□□□□ -0.02
HDAC1-201ENST00000373548 RPLP1P05386 114 aaKnown RBP14.91□□□□□ -0.02
HDAC1-201ENST00000373548 IL17RELQ6ZVW7 336 aa14.91□□□□□ -0.02
HDAC1-201ENST00000373548 C20orf173Q96LM9 149 aa14.91□□□□□ -0.02
HDAC1-201ENST00000373548 CLEC5AQ9NY25 188 aa14.91□□□□□ -0.02
HDAC1-201ENST00000373548 HECTD1Q9ULT8 2610 aa14.91□□□□□ -0.02
HDAC1-201ENST00000373548 SOCS3O14543 225 aa14.9□□□□□ -0.02
HDAC1-201ENST00000373548 BMI1P35226 326 aa14.9□□□□□ -0.02
HDAC1-201ENST00000373548 PAFAH1B2P68402 229 aa14.9□□□□□ -0.02
HDAC1-201ENST00000373548 IQCJQ1A5X6 159 aa14.9□□□□□ -0.02
HDAC1-201ENST00000373548 Q6AWC8 147 aa14.9□□□□□ -0.02
HDAC1-201ENST00000373548 RHPN1-AS1Q9BWJ2 59 aa14.9□□□□□ -0.02
HDAC1-201ENST00000373548 SIGLECL1Q8N7X8 197 aa14.9□□□□□ -0.02
HDAC1-201ENST00000373548 KLF5Q13887 457 aaPredicted RBP14.89□□□□□ -0.03
HDAC1-201ENST00000373548 C9orf47Q6ZRZ4 202 aa14.89□□□□□ -0.03
HDAC1-201ENST00000373548 DUX5Q96PT3 197 aa14.89□□□□□ -0.03
HDAC1-201ENST00000373548 K7EMT4 169 aa14.89□□□□□ -0.03
HDAC1-201ENST00000373548 ZNF138P52744 262 aa14.89□□□□□ -0.03
HDAC1-201ENST00000373548 RIGQ13278 110 aa14.89□□□□□ -0.03
HDAC1-201ENST00000373548 FOXE3Q13461 319 aa14.89□□□□□ -0.03
HDAC1-201ENST00000373548 FAM106AQ4KMX7 169 aa14.89□□□□□ -0.03
HDAC1-201ENST00000373548 MYOZ3Q8TDC0 251 aa14.89□□□□□ -0.03
HDAC1-201ENST00000373548 KCNS1Q96KK3 526 aa14.89□□□□□ -0.03
HDAC1-201ENST00000373548 TPPP3Q9BW30 176 aa14.89□□□□□ -0.03
HDAC1-201ENST00000373548 SMPXQ9UHP9 88 aa14.89□□□□□ -0.03
HDAC1-201ENST00000373548 EDN2P20800 178 aa14.88□□□□□ -0.03
HDAC1-201ENST00000373548 TMEM78Q5T7P6 136 aa14.88□□□□□ -0.03
HDAC1-201ENST00000373548 ZNF575Q86XF7 245 aa14.88□□□□□ -0.03
HDAC1-201ENST00000373548 TLN2Q9Y4G6 2542 aa14.88□□□□□ -0.03
HDAC1-201ENST00000373548 FABP5P3A8MUU1 101 aa14.87□□□□□ -0.03
HDAC1-201ENST00000373548 ELANEP08246 267 aa14.87□□□□□ -0.03
HDAC1-201ENST00000373548 LYZL1Q6UWQ5 148 aa14.87□□□□□ -0.03
HDAC1-201ENST00000373548 GATD1Q8NB37 220 aa14.87□□□□□ -0.03
HDAC1-201ENST00000373548 SAMD10Q9BYL1 202 aa14.87□□□□□ -0.03
HDAC1-201ENST00000373548 NRN1Q9NPD7 142 aa14.87□□□□□ -0.03
HDAC1-201ENST00000373548 CCDC168Q8NDH2 2452 aa14.87□□□□□ -0.03
HDAC1-201ENST00000373548 RPS20P60866 119 aaKnown RBP14.87□□□□□ -0.03
HDAC1-201ENST00000373548 SRSF2Q01130 221 aaKnown RBP14.87□□□□□ -0.03
HDAC1-201ENST00000373548 Q6ZWC4 215 aa14.87□□□□□ -0.03
HDAC1-201ENST00000373548 ZNF738Q8NE65 137 aa14.87□□□□□ -0.03
HDAC1-201ENST00000373548 ZNF469Q96JG9 3925 aaPredicted RBP14.87□□□□□ -0.03
HDAC1-201ENST00000373548 LOC102724200A0A096LPH7 203 aaPredicted RBP14.86□□□□□ -0.03
HDAC1-201ENST00000373548 GPX1P07203 203 aa14.86□□□□□ -0.03
HDAC1-201ENST00000373548 RPL11P62913 178 aaKnown RBP14.86□□□□□ -0.03
HDAC1-201ENST00000373548 Q8N2B8 174 aa14.86□□□□□ -0.03
HDAC1-201ENST00000373548 A0A1B0GW15 77 aa14.86□□□□□ -0.03
HDAC1-201ENST00000373548 PPP1R14DQ9NXH3 145 aa14.86□□□□□ -0.03
HDAC1-201ENST00000373548 SELENOKQ9Y6D0 94 aa14.86□□□□□ -0.03
HDAC1-201ENST00000373548 PDZD2O15018 2839 aa14.85□□□□□ -0.03
HDAC1-201ENST00000373548 ZNF705DP0CH99 300 aaPredicted RBP14.85□□□□□ -0.03
HDAC1-201ENST00000373548 ZNF705BP0CI00 300 aaPredicted RBP14.85□□□□□ -0.03
HDAC1-201ENST00000373548 BORCS7Q96B45 105 aa14.85□□□□□ -0.03
HDAC1-201ENST00000373548 ORM1P02763 201 aa14.84□□□□□ -0.03
HDAC1-201ENST00000373548 LGALS1P09382 135 aaKnown RBP14.84□□□□□ -0.03
HDAC1-201ENST00000373548 RNF152Q8N8N0 203 aa14.84□□□□□ -0.03
HDAC1-201ENST00000373548 UFC1Q9Y3C8 167 aa14.84□□□□□ -0.03
HDAC1-201ENST00000373548 ITPR2Q14571 2701 aa14.84□□□□□ -0.03
HDAC1-201ENST00000373548 IGKV3-7A0A075B6H7 116 aa14.84□□□□□ -0.03
HDAC1-201ENST00000373548 IGLC6P0CF74 106 aa14.84□□□□□ -0.03
HDAC1-201ENST00000373548 CTRLP40313 264 aa14.84□□□□□ -0.03
HDAC1-201ENST00000373548 LINC01559Q495D7 138 aa14.84□□□□□ -0.03
HDAC1-201ENST00000373548 FLNAP21333 2647 aaKnown RBP14.83□□□□□ -0.03
HDAC1-201ENST00000373548 FAM181BA6NEQ2 426 aa14.83□□□□□ -0.04
HDAC1-201ENST00000373548 ZNF324O75467 553 aaPredicted RBP14.83□□□□□ -0.04
HDAC1-201ENST00000373548 CD33P20138 364 aa14.83□□□□□ -0.04
HDAC1-201ENST00000373548 PMCHP20382 165 aa14.83□□□□□ -0.04
HDAC1-201ENST00000373548 AMTP48728 403 aa14.83□□□□□ -0.04
HDAC1-201ENST00000373548 FER1L6-AS1Q8NA97 138 aa14.83□□□□□ -0.04
HDAC1-201ENST00000373548 TMEM213A2RRL7 107 aa14.83□□□□□ -0.04
HDAC1-201ENST00000373548 TEX29Q8N6K0 151 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms