RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 EPDR1Q9UM22 224 aa13.64□□□□□ -0.23
CDX4-201ENST00000373514 DNAH9Q9NYC9 4486 aa13.64□□□□□ -0.23
CDX4-201ENST00000373514 PEX7O00628 323 aa13.64□□□□□ -0.23
CDX4-201ENST00000373514 C2CD4CQ8TF44 421 aa13.64□□□□□ -0.23
CDX4-201ENST00000373514 AAMDCQ9H7C9 122 aa13.64□□□□□ -0.23
CDX4-201ENST00000373514 RPH3ALQ9UNE2 315 aa13.64□□□□□ -0.23
CDX4-201ENST00000373514 AKR1C3P42330 323 aa13.63□□□□□ -0.23
CDX4-201ENST00000373514 SAMD13Q5VXD3 122 aa13.63□□□□□ -0.23
CDX4-201ENST00000373514 TRPT1Q86TN4 253 aaKnown RBP13.63□□□□□ -0.23
CDX4-201ENST00000373514 STHQ8IWL8 128 aa13.63□□□□□ -0.23
CDX4-201ENST00000373514 CMTM2Q8TAZ6 248 aa13.63□□□□□ -0.23
CDX4-201ENST00000373514 HIST1H2BAQ96A08 127 aa13.63□□□□□ -0.23
CDX4-201ENST00000373514 SLC50A1Q9BRV3 221 aa13.63□□□□□ -0.23
CDX4-201ENST00000373514 TGP01266 2768 aa13.62□□□□□ -0.23
CDX4-201ENST00000373514 SNAPINO95295 136 aa13.62□□□□□ -0.23
CDX4-201ENST00000373514 ZNF705DP0CH99 300 aaPredicted RBP13.62□□□□□ -0.23
CDX4-201ENST00000373514 ZNF705BP0CI00 300 aaPredicted RBP13.62□□□□□ -0.23
CDX4-201ENST00000373514 RPL35P42766 123 aaKnown RBP13.62□□□□□ -0.23
CDX4-201ENST00000373514 ATRAIDQ6UW56 229 aa13.62□□□□□ -0.23
CDX4-201ENST00000373514 CLRN3Q8NCR9 226 aa13.62□□□□□ -0.23
CDX4-201ENST00000373514 ZNF738Q8NE65 137 aa13.62□□□□□ -0.23
CDX4-201ENST00000373514 TVP23CQ96ET8 276 aa13.62□□□□□ -0.23
CDX4-201ENST00000373514 SAV1Q9H4B6 383 aaPredicted RBP13.62□□□□□ -0.23
CDX4-201ENST00000373514 NAT8Q9UHE5 227 aa13.62□□□□□ -0.23
CDX4-201ENST00000373514 TENM3Q9P273 2699 aa13.61□□□□□ -0.23
CDX4-201ENST00000373514 M0R036 132 aa13.61□□□□□ -0.23
CDX4-201ENST00000373514 M0R3E3 92 aa13.61□□□□□ -0.23
CDX4-201ENST00000373514 TMEM241Q24JQ0 296 aa13.61□□□□□ -0.23
CDX4-201ENST00000373514 ATG101Q9BSB4 218 aa13.61□□□□□ -0.23
CDX4-201ENST00000373514 SDF2L1Q9HCN8 221 aa13.61□□□□□ -0.23
CDX4-201ENST00000373514 ZNF705FA8MVS1 300 aaPredicted RBP13.6□□□□□ -0.23
CDX4-201ENST00000373514 IGKV3-20P01619 116 aa13.6□□□□□ -0.23
CDX4-201ENST00000373514 TCRAP04437 139 aa13.6□□□□□ -0.23
CDX4-201ENST00000373514 HLA-DRB4P13762 266 aa13.6□□□□□ -0.23
CDX4-201ENST00000373514 CNN1P51911 297 aaKnown RBP13.6□□□□□ -0.23
CDX4-201ENST00000373514 FOXI2Q6ZQN5 318 aa13.6□□□□□ -0.23
CDX4-201ENST00000373514 LINC00479Q96M42 142 aa13.6□□□□□ -0.23
CDX4-201ENST00000373514 TM2D3Q9BRN9 247 aa13.6□□□□□ -0.23
CDX4-201ENST00000373514 HLA-DRB4X5D2U9 266 aa13.6□□□□□ -0.23
CDX4-201ENST00000373514 TRBV20OR9-2A0A075B6H5 130 aa13.59□□□□□ -0.23
CDX4-201ENST00000373514 H3BMM0 161 aa13.59□□□□□ -0.23
CDX4-201ENST00000373514 PSG3Q16557 428 aa13.59□□□□□ -0.23
CDX4-201ENST00000373514 TRAV34A0A0B4J273 112 aa13.59□□□□□ -0.23
CDX4-201ENST00000373514 A0A0J9YX75 114 aa13.59□□□□□ -0.23
CDX4-201ENST00000373514 SCO1O75880 301 aa13.59□□□□□ -0.23
CDX4-201ENST00000373514 DEFB135Q30KP9 77 aa13.59□□□□□ -0.23
CDX4-201ENST00000373514 GOLT1AQ6ZVE7 132 aa13.59□□□□□ -0.23
CDX4-201ENST00000373514 PGPEP1LA6NFU8 196 aa13.58□□□□□ -0.24
CDX4-201ENST00000373514 C9JCJ5 164 aa13.58□□□□□ -0.24
CDX4-201ENST00000373514 DIRC3C9JPN6 131 aa13.58□□□□□ -0.24
CDX4-201ENST00000373514 PRAC2D3DTV9 90 aa13.58□□□□□ -0.24
CDX4-201ENST00000373514 CSN1S1P47710 185 aa13.58□□□□□ -0.24
CDX4-201ENST00000373514 APOC4P55056 127 aa13.58□□□□□ -0.24
CDX4-201ENST00000373514 TAS2R60P59551 318 aa13.58□□□□□ -0.24
CDX4-201ENST00000373514 RPL23P62829 140 aaKnown RBP13.58□□□□□ -0.24
CDX4-201ENST00000373514 PNRC1Q12796 327 aaPredicted RBP13.58□□□□□ -0.24
CDX4-201ENST00000373514 CENPWQ5EE01 88 aa13.58□□□□□ -0.24
CDX4-201ENST00000373514 OR4B1Q8NGF8 309 aa13.58□□□□□ -0.24
CDX4-201ENST00000373514 PRELID1Q9Y255 219 aa13.58□□□□□ -0.24
CDX4-201ENST00000373514 CA1P00915 261 aaPredicted RBP13.57□□□□□ -0.24
CDX4-201ENST00000373514 GNG4P50150 75 aa13.57□□□□□ -0.24
CDX4-201ENST00000373514 FXYD7P58549 80 aa13.57□□□□□ -0.24
CDX4-201ENST00000373514 UBE2G1P62253 170 aa13.57□□□□□ -0.24
CDX4-201ENST00000373514 ADIRFQ15847 76 aa13.57□□□□□ -0.24
CDX4-201ENST00000373514 TMEM183BQ1AE95 376 aa13.57□□□□□ -0.24
CDX4-201ENST00000373514 EBLN2Q6P2I7 272 aa13.57□□□□□ -0.24
CDX4-201ENST00000373514 ARL6IP6Q8N6S5 226 aa13.57□□□□□ -0.24
CDX4-201ENST00000373514 SGK494Q96LW2 274 aa13.57□□□□□ -0.24
CDX4-201ENST00000373514 IGF2BP2-AS1Q96M15 143 aa13.57□□□□□ -0.24
CDX4-201ENST00000373514 KLF12Q9Y4X4 402 aa13.57□□□□□ -0.24
CDX4-201ENST00000373514 HUWE1Q7Z6Z7 4374 aaKnown RBP13.57□□□□□ -0.24
CDX4-201ENST00000373514 KIR2DL5BA0A0G2JN68 375 aa13.56□□□□□ -0.24
CDX4-201ENST00000373514 KIR2DL5BA0A0G2JPC4 375 aa13.56□□□□□ -0.24
CDX4-201ENST00000373514 GIG44P09565 113 aaPredicted RBP13.56□□□□□ -0.24
CDX4-201ENST00000373514 HIST1H1AQ02539 215 aaPredicted RBP13.56□□□□□ -0.24
CDX4-201ENST00000373514 KIR2DL5AQ8N109 375 aa13.56□□□□□ -0.24
CDX4-201ENST00000373514 KIR2DL5BQ8NHK3 375 aa13.56□□□□□ -0.24
CDX4-201ENST00000373514 FMC1Q96HJ9 113 aa13.56□□□□□ -0.24
CDX4-201ENST00000373514 SPATA25Q9BR10 227 aa13.56□□□□□ -0.24
CDX4-201ENST00000373514 CSTL1Q9H114 145 aa13.56□□□□□ -0.24
CDX4-201ENST00000373514 C7orf77A4D0Y5 90 aa13.55□□□□□ -0.24
CDX4-201ENST00000373514 K7EQM0 130 aa13.55□□□□□ -0.24
CDX4-201ENST00000373514 S100A9P06702 114 aaKnown RBP13.55□□□□□ -0.24
CDX4-201ENST00000373514 LINC01551Q86U37 167 aa13.55□□□□□ -0.24
CDX4-201ENST00000373514 OCC1Q8TAD7 63 aa13.55□□□□□ -0.24
CDX4-201ENST00000373514 CLEC5AQ9NY25 188 aa13.55□□□□□ -0.24
CDX4-201ENST00000373514 TRAV8-1A0A0A6YYK1 113 aa13.54□□□□□ -0.24
CDX4-201ENST00000373514 RHEBQ15382 184 aa13.54□□□□□ -0.24
CDX4-201ENST00000373514 TMEM75Q8N9X5 138 aa13.54□□□□□ -0.24
CDX4-201ENST00000373514 OR8A1Q8NGG7 326 aa13.54□□□□□ -0.24
CDX4-201ENST00000373514 MRPL53Q96EL3 112 aaKnown RBP13.54□□□□□ -0.24
CDX4-201ENST00000373514 RPS10P5Q9NQ39 176 aa13.54□□□□□ -0.24
CDX4-201ENST00000373514 LY96Q9Y6Y9 160 aa13.54□□□□□ -0.24
CDX4-201ENST00000373514 NBEAL2Q6ZNJ1 2754 aa13.54□□□□□ -0.24
CDX4-201ENST00000373514 IGKV2-40A0A087WW87 121 aaPredicted RBP13.54□□□□□ -0.24
CDX4-201ENST00000373514 SERTM2A0A1B0GWG4 89 aa13.54□□□□□ -0.24
CDX4-201ENST00000373514 IGKV2D-40P01614 121 aaPredicted RBP13.54□□□□□ -0.24
CDX4-201ENST00000373514 IGLV2-11P01706 119 aa13.54□□□□□ -0.24
CDX4-201ENST00000373514 NHLRC4P0CG21 123 aaPredicted RBP13.54□□□□□ -0.24
CDX4-201ENST00000373514 BAGE2Q86Y30 109 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms