RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 C8orf49Q96NF6 230 aa4.99□□□□□ -1.61
CHD6-202ENST00000373222 RNF2Q99496 336 aa4.99□□□□□ -1.61
CHD6-202ENST00000373222 RASL11BQ9BPW5 248 aa4.99□□□□□ -1.61
CHD6-202ENST00000373222 KLF12Q9Y4X4 402 aa4.99□□□□□ -1.61
CHD6-202ENST00000373222 TIMM8BQ9Y5J9 83 aaPredicted RBP4.99□□□□□ -1.61
CHD6-202ENST00000373222 NF1P21359 2839 aa4.99□□□□□ -1.61
CHD6-202ENST00000373222 A0A1B0GXF2 115 aa4.99□□□□□ -1.61
CHD6-202ENST00000373222 C19orf71A6NCJ1 209 aa4.99□□□□□ -1.61
CHD6-202ENST00000373222 TRIAP1O43715 76 aa4.99□□□□□ -1.61
CHD6-202ENST00000373222 PLA2G1BP04054 148 aaKnown RBP4.99□□□□□ -1.61
CHD6-202ENST00000373222 HLA-DMBP28068 263 aa4.99□□□□□ -1.61
CHD6-202ENST00000373222 LY6DQ14210 128 aa4.99□□□□□ -1.61
CHD6-202ENST00000373222 SPATA45Q537H7 98 aa4.99□□□□□ -1.61
CHD6-202ENST00000373222 Q56UQ5 140 aa4.99□□□□□ -1.61
CHD6-202ENST00000373222 OR10J3Q5JRS4 329 aa4.99□□□□□ -1.61
CHD6-202ENST00000373222 FAM231DQ6ZW35 169 aa4.99□□□□□ -1.61
CHD6-202ENST00000373222 Q86TA4 180 aa4.99□□□□□ -1.61
CHD6-202ENST00000373222 C5orf17Q8NAS9 161 aa4.99□□□□□ -1.61
CHD6-202ENST00000373222 OR8B3Q8NGG8 313 aa4.99□□□□□ -1.61
CHD6-202ENST00000373222 OR8B2Q96RD0 313 aa4.99□□□□□ -1.61
CHD6-202ENST00000373222 RPP21Q9H633 154 aaKnown RBP4.99□□□□□ -1.61
CHD6-202ENST00000373222 NBPF19A0A087WUL8 3843 aa4.98□□□□□ -1.61
CHD6-202ENST00000373222 ANKRD17O75179 2603 aaKnown RBP4.98□□□□□ -1.61
CHD6-202ENST00000373222 SORL1Q92673 2214 aa4.98□□□□□ -1.61
CHD6-202ENST00000373222 TMSB15BA0A087X1C1 80 aa4.98□□□□□ -1.61
CHD6-202ENST00000373222 NCBP2LA6PVI3 153 aaKnown RBP4.98□□□□□ -1.61
CHD6-202ENST00000373222 TCAPO15273 167 aa4.98□□□□□ -1.61
CHD6-202ENST00000373222 TOMM40O96008 361 aa4.98□□□□□ -1.61
CHD6-202ENST00000373222 P01737 135 aa4.98□□□□□ -1.61
CHD6-202ENST00000373222 HTR1DP28221 377 aa4.98□□□□□ -1.61
CHD6-202ENST00000373222 CTRLP40313 264 aa4.98□□□□□ -1.61
CHD6-202ENST00000373222 CRIP1P50238 77 aa4.98□□□□□ -1.61
CHD6-202ENST00000373222 PSG3Q16557 428 aa4.98□□□□□ -1.61
CHD6-202ENST00000373222 ZNF491Q8N8L2 437 aa4.98□□□□□ -1.61
CHD6-202ENST00000373222 C22orf15Q8WYQ4 148 aa4.98□□□□□ -1.61
CHD6-202ENST00000373222 PRSS22Q9GZN4 317 aa4.98□□□□□ -1.61
CHD6-202ENST00000373222 MRPL27Q9P0M9 148 aaKnown RBP4.98□□□□□ -1.61
CHD6-202ENST00000373222 NIPBLQ6KC79 2804 aaeCLIP4.98□□□□□ -1.611e-5■■■■□ 22.3
CHD6-202ENST00000373222 OR2T8A6NH00 312 aa4.98□□□□□ -1.61
CHD6-202ENST00000373222 M0R143 59 aa4.98□□□□□ -1.61
CHD6-202ENST00000373222 ARMS2P0C7Q2 107 aa4.98□□□□□ -1.61
CHD6-202ENST00000373222 HIST1H1EP10412 219 aaKnown RBP4.98□□□□□ -1.61
CHD6-202ENST00000373222 GATA3P23771 443 aa4.98□□□□□ -1.61
CHD6-202ENST00000373222 FAM120AOSQ5T036 256 aa4.98□□□□□ -1.61
CHD6-202ENST00000373222 LY6G5BQ8NDX9 201 aa4.98□□□□□ -1.61
CHD6-202ENST00000373222 LPAR2Q9HBW0 351 aa4.98□□□□□ -1.61
CHD6-202ENST00000373222 TEX15Q9BXT5 2789 aa4.98□□□□□ -1.61
CHD6-202ENST00000373222 TRBV19A0A075B6N1 114 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 IGHV3OR16-13A0A075B7E8 117 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 IGHV3-74A0A0B4J1X5 117 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 LINC01548A6NM66 108 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 M0R2Z0 102 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 SNAI2O43623 268 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 HSBP1O75506 76 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 OR2J3O76001 311 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 FXYD7P58549 80 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 VMO1Q7Z5L0 202 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 Q8TAT8 98 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 PMCHL2Q9BQD1 86 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 C20orf144Q9BQM9 153 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 MIEN1Q9BRT3 115 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 DPM3Q9P2X0 92 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 SETD2Q9BYW2 2564 aaPredicted RBP4.97□□□□□ -1.61
CHD6-202ENST00000373222 IGKV2-40A0A087WW87 121 aaPredicted RBP4.97□□□□□ -1.61
CHD6-202ENST00000373222 IGHV3-66A0A0C4DH42 116 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 C2orf70A6NJV1 201 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 NDUFB8O95169 186 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 IGKV2D-40P01614 121 aaPredicted RBP4.97□□□□□ -1.61
CHD6-202ENST00000373222 HLA-DRB1P01911 266 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 FAM106CPP0CH98 169 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 IGLC2P0DOY2 106 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 ZNF25P17030 456 aaPredicted RBP4.97□□□□□ -1.61
CHD6-202ENST00000373222 CEACAM3P40198 252 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 PLP1P60201 277 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 HBBP68871 147 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 FAM106AQ4KMX7 169 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 C11orf71Q6IPW1 123 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 FMC1Q96HJ9 113 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 MYO9AB2RTY4 2548 aa4.97□□□□□ -1.61
CHD6-202ENST00000373222 IGHV3OR16-10A0A075B7F0 116 aa4.96□□□□□ -1.62
CHD6-202ENST00000373222 H3BRN7 92 aa4.96□□□□□ -1.62
CHD6-202ENST00000373222 MRPS12O15235 138 aaKnown RBP4.96□□□□□ -1.62
CHD6-202ENST00000373222 APOHP02749 345 aaPredicted RBP4.96□□□□□ -1.62
CHD6-202ENST00000373222 UQCRFS1P47985 274 aa4.96□□□□□ -1.62
CHD6-202ENST00000373222 SUMO2P61956 95 aaKnown RBP4.96□□□□□ -1.62
CHD6-202ENST00000373222 FOXE3Q13461 319 aa4.96□□□□□ -1.62
CHD6-202ENST00000373222 C5orf64Q2M2E5 130 aa4.96□□□□□ -1.62
CHD6-202ENST00000373222 DTX2Q86UW9 622 aa4.96□□□□□ -1.62
CHD6-202ENST00000373222 BOD1L2Q8IYS8 172 aa4.96□□□□□ -1.62
CHD6-202ENST00000373222 STPG4Q8N801 248 aa4.96□□□□□ -1.62
CHD6-202ENST00000373222 TMEM75Q8N9X5 138 aa4.96□□□□□ -1.62
CHD6-202ENST00000373222 STXBP6Q8NFX7 210 aa4.96□□□□□ -1.62
CHD6-202ENST00000373222 NEU4Q8WWR8 484 aaPredicted RBP4.96□□□□□ -1.62
CHD6-202ENST00000373222 SHANK2-AS3Q9BTD1 123 aa4.96□□□□□ -1.62
CHD6-202ENST00000373222 C1RLQ9NZP8 487 aa4.96□□□□□ -1.62
CHD6-202ENST00000373222 AKAP9Q99996 3911 aa4.96□□□□□ -1.62
CHD6-202ENST00000373222 CREBBPQ92793 2442 aa4.96□□□□□ -1.62
CHD6-202ENST00000373222 PTPN13Q12923 2485 aa4.96□□□□□ -1.62
CHD6-202ENST00000373222 DOPEY1Q5JWR5 2465 aa4.96□□□□□ -1.62
CHD6-202ENST00000373222 IGHV3-49A0A0A0MS15 119 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms