RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 TREM1Q9NP99 234 aa11.72□□□□□ -0.53
TMEM53-204ENST00000372243 DNAH3Q8TD57 4116 aa11.72□□□□□ -0.53
TMEM53-204ENST00000372243 KNCNA6PVL3 124 aa11.71□□□□□ -0.53
TMEM53-204ENST00000372243 ZNF705DP0CH99 300 aaPredicted RBP11.71□□□□□ -0.53
TMEM53-204ENST00000372243 ZNF705BP0CI00 300 aaPredicted RBP11.71□□□□□ -0.53
TMEM53-204ENST00000372243 TAS2R60P59551 318 aa11.71□□□□□ -0.53
TMEM53-204ENST00000372243 UBE2G1P62253 170 aa11.71□□□□□ -0.53
TMEM53-204ENST00000372243 FLI1Q01543 452 aaPredicted RBP11.71□□□□□ -0.53
TMEM53-204ENST00000372243 LINC00479Q96M42 142 aa11.71□□□□□ -0.53
TMEM53-204ENST00000372243 LENEPQ9Y5L5 61 aa11.71□□□□□ -0.53
TMEM53-204ENST00000372243 TRAV8-1A0A0A6YYK1 113 aa11.71□□□□□ -0.54
TMEM53-204ENST00000372243 TRBV7-9A0A0J9YWB2 115 aa11.71□□□□□ -0.54
TMEM53-204ENST00000372243 PRB4P10163 310 aaPredicted RBP11.71□□□□□ -0.54
TMEM53-204ENST00000372243 RPL35P42766 123 aaKnown RBP11.71□□□□□ -0.54
TMEM53-204ENST00000372243 ZNF138P52744 262 aa11.71□□□□□ -0.54
TMEM53-204ENST00000372243 ERCC8Q13216 396 aa11.71□□□□□ -0.54
TMEM53-204ENST00000372243 STHQ8IWL8 128 aa11.71□□□□□ -0.54
TMEM53-204ENST00000372243 DEFB125Q8N687 156 aa11.71□□□□□ -0.54
TMEM53-204ENST00000372243 ODF3Q96PU9 254 aa11.71□□□□□ -0.54
TMEM53-204ENST00000372243 CITED4Q96RK1 184 aa11.71□□□□□ -0.54
TMEM53-204ENST00000372243 WFDC10AQ9H1F0 79 aa11.71□□□□□ -0.54
TMEM53-204ENST00000372243 ZNF492Q9P255 531 aa11.71□□□□□ -0.54
TMEM53-204ENST00000372243 PSG8Q9UQ74 426 aa11.71□□□□□ -0.54
TMEM53-204ENST00000372243 TRPT1Q86TN4 253 aaKnown RBP11.7□□□□□ -0.54
TMEM53-204ENST00000372243 DERL1Q9BUN8 251 aa11.7□□□□□ -0.54
TMEM53-204ENST00000372243 PARLQ9H300 379 aa11.7□□□□□ -0.54
TMEM53-204ENST00000372243 MGAM2Q2M2H8 2515 aa11.69□□□□□ -0.54
TMEM53-204ENST00000372243 TRAV34A0A0B4J273 112 aa11.69□□□□□ -0.54
TMEM53-204ENST00000372243 FAM74A3Q4VXF1 159 aa11.69□□□□□ -0.54
TMEM53-204ENST00000372243 Q86TA4 180 aa11.69□□□□□ -0.54
TMEM53-204ENST00000372243 OR4B1Q8NGF8 309 aa11.69□□□□□ -0.54
TMEM53-204ENST00000372243 FAM19A4Q96LR4 140 aa11.69□□□□□ -0.54
TMEM53-204ENST00000372243 ZFP30Q9Y2G7 519 aa11.69□□□□□ -0.54
TMEM53-204ENST00000372243 C9JCJ5 164 aa11.68□□□□□ -0.54
TMEM53-204ENST00000372243 LTAP01374 205 aa11.68□□□□□ -0.54
TMEM53-204ENST00000372243 CT45A10P0DMU9 189 aa11.68□□□□□ -0.54
TMEM53-204ENST00000372243 SAPCD1Q5SSQ6 148 aa11.68□□□□□ -0.54
TMEM53-204ENST00000372243 AMTNQ6UX39 209 aa11.68□□□□□ -0.54
TMEM53-204ENST00000372243 SGK494Q96LW2 274 aa11.68□□□□□ -0.54
TMEM53-204ENST00000372243 SRD5A3Q9H8P0 318 aa11.68□□□□□ -0.54
TMEM53-204ENST00000372243 A8MZ25 164 aa11.67□□□□□ -0.54
TMEM53-204ENST00000372243 SFTA3P0C7M3 94 aa11.67□□□□□ -0.54
TMEM53-204ENST00000372243 CEBPGP53567 150 aa11.67□□□□□ -0.54
TMEM53-204ENST00000372243 SOHLH1Q5JUK2 328 aa11.67□□□□□ -0.54
TMEM53-204ENST00000372243 PRNTQ86SH4 94 aa11.67□□□□□ -0.54
TMEM53-204ENST00000372243 SMIM12Q96EX1 92 aa11.67□□□□□ -0.54
TMEM53-204ENST00000372243 IGF2BP2-AS1Q96M15 143 aa11.67□□□□□ -0.54
TMEM53-204ENST00000372243 NDFIP1Q9BT67 221 aa11.67□□□□□ -0.54
TMEM53-204ENST00000372243 AGRNO00468 2067 aa11.67□□□□□ -0.54
TMEM53-204ENST00000372243 TMEM218A2RU14 115 aa11.67□□□□□ -0.54
TMEM53-204ENST00000372243 CRISP2P16562 243 aa11.67□□□□□ -0.54
TMEM53-204ENST00000372243 Q8TAT8 98 aa11.67□□□□□ -0.54
TMEM53-204ENST00000372243 SMIM7Q9BQ49 75 aa11.67□□□□□ -0.54
TMEM53-204ENST00000372243 TRBV20OR9-2A0A075B6H5 130 aa11.66□□□□□ -0.54
TMEM53-204ENST00000372243 RBMY1BA6NDE4 496 aaKnown RBP11.66□□□□□ -0.54
TMEM53-204ENST00000372243 RBMY1EA6NEQ0 496 aaKnown RBP11.66□□□□□ -0.54
TMEM53-204ENST00000372243 ZNF727A8MUV8 499 aa11.66□□□□□ -0.54
TMEM53-204ENST00000372243 IGKV3-20P01619 116 aa11.66□□□□□ -0.54
TMEM53-204ENST00000372243 RBMY1DP0C7P1 496 aaKnown RBP11.66□□□□□ -0.54
TMEM53-204ENST00000372243 TSPOP30536 169 aa11.66□□□□□ -0.54
TMEM53-204ENST00000372243 GNG4P50150 75 aa11.66□□□□□ -0.54
TMEM53-204ENST00000372243 NUTF2P61970 127 aaKnown RBP11.66□□□□□ -0.54
TMEM53-204ENST00000372243 ZNF674Q2M3X9 581 aa11.66□□□□□ -0.54
TMEM53-204ENST00000372243 CENPWQ5EE01 88 aa11.66□□□□□ -0.54
TMEM53-204ENST00000372243 COX8CQ7Z4L0 72 aa11.66□□□□□ -0.54
TMEM53-204ENST00000372243 BAGE2Q86Y30 109 aa11.66□□□□□ -0.54
TMEM53-204ENST00000372243 SLC7A5P1Q8MH63 180 aa11.66□□□□□ -0.54
TMEM53-204ENST00000372243 TVP23CQ96ET8 276 aa11.66□□□□□ -0.54
TMEM53-204ENST00000372243 MLST8Q9BVC4 326 aa11.66□□□□□ -0.54
TMEM53-204ENST00000372243 NBEAL1Q6ZS30 2694 aa11.65□□□□□ -0.54
TMEM53-204ENST00000372243 IGHV4-30-4P0DP06 118 aa11.65□□□□□ -0.54
TMEM53-204ENST00000372243 LEPP41159 167 aa11.65□□□□□ -0.54
TMEM53-204ENST00000372243 MORN3Q6PF18 240 aaPredicted RBP11.65□□□□□ -0.54
TMEM53-204ENST00000372243 TMEM183AQ8IXX5 376 aa11.65□□□□□ -0.54
TMEM53-204ENST00000372243 LY96Q9Y6Y9 160 aa11.65□□□□□ -0.54
TMEM53-204ENST00000372243 AMBPP02760 352 aa11.64□□□□□ -0.55
TMEM53-204ENST00000372243 CDKN1BP46527 198 aa11.64□□□□□ -0.55
TMEM53-204ENST00000372243 TUBA4BQ9H853 241 aa11.64□□□□□ -0.55
TMEM53-204ENST00000372243 AURKAIP1Q9NWT8 199 aaPredicted RBP11.64□□□□□ -0.55
TMEM53-204ENST00000372243 LOC102724200A0A096LPH7 203 aaPredicted RBP11.63□□□□□ -0.55
TMEM53-204ENST00000372243 KLLNB2CW77 178 aa11.63□□□□□ -0.55
TMEM53-204ENST00000372243 IGLV2-8P01709 118 aa11.63□□□□□ -0.55
TMEM53-204ENST00000372243 LINC00322Q6ZN03 302 aaPredicted RBP11.63□□□□□ -0.55
TMEM53-204ENST00000372243 ZFAND2AQ8N6M9 145 aa11.63□□□□□ -0.55
TMEM53-204ENST00000372243 SEC11CQ9BY50 192 aa11.63□□□□□ -0.55
TMEM53-204ENST00000372243 NOTCH1P46531 2555 aa11.63□□□□□ -0.55
TMEM53-204ENST00000372243 KIR2DL5BA0A0G2JN68 375 aa11.62□□□□□ -0.55
TMEM53-204ENST00000372243 KIR2DL5BA0A0G2JPC4 375 aa11.62□□□□□ -0.55
TMEM53-204ENST00000372243 RPL35AP18077 110 aaKnown RBP11.62□□□□□ -0.55
TMEM53-204ENST00000372243 SPINK13Q1W4C9 94 aa11.62□□□□□ -0.55
TMEM53-204ENST00000372243 TMEM241Q24JQ0 296 aa11.62□□□□□ -0.55
TMEM53-204ENST00000372243 SMUG1Q53HV7 270 aa11.62□□□□□ -0.55
TMEM53-204ENST00000372243 KIR2DL5AQ8N109 375 aa11.62□□□□□ -0.55
TMEM53-204ENST00000372243 KIR2DL5BQ8NHK3 375 aa11.62□□□□□ -0.55
TMEM53-204ENST00000372243 ASCL2Q99929 193 aa11.62□□□□□ -0.55
TMEM53-204ENST00000372243 NIPSNAP3BQ9BS92 247 aa11.62□□□□□ -0.55
TMEM53-204ENST00000372243 NAT8Q9UHE5 227 aa11.62□□□□□ -0.55
TMEM53-204ENST00000372243 F8W036 122 aa11.62□□□□□ -0.55
TMEM53-204ENST00000372243 M0R2Z0 102 aa11.62□□□□□ -0.55
TMEM53-204ENST00000372243 GPX1P07203 203 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms