RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 DOPEY2Q9Y3R5 2298 aa13.39□□□□□ -0.27
VEGFA-205ENST00000372067 A1L4Q6 167 aa13.39□□□□□ -0.27
VEGFA-205ENST00000372067 H0Y8G0 127 aa13.39□□□□□ -0.27
VEGFA-205ENST00000372067 NPFFO15130 113 aa13.39□□□□□ -0.27
VEGFA-205ENST00000372067 NPBQ8NG41 125 aa13.39□□□□□ -0.27
VEGFA-205ENST00000372067 M0R2Z0 102 aa13.39□□□□□ -0.27
VEGFA-205ENST00000372067 ATP6V0E1O15342 81 aa13.39□□□□□ -0.27
VEGFA-205ENST00000372067 CLEC3BP05452 202 aa13.39□□□□□ -0.27
VEGFA-205ENST00000372067 UBE2E1P51965 193 aa13.39□□□□□ -0.27
VEGFA-205ENST00000372067 USP9YO00507 2555 aaPredicted RBP13.39□□□□□ -0.27
VEGFA-205ENST00000372067 IGHV4-39P01824 125 aa13.38□□□□□ -0.27
VEGFA-205ENST00000372067 HIST1H1AQ02539 215 aaPredicted RBP13.38□□□□□ -0.27
VEGFA-205ENST00000372067 ATP5G2Q06055 141 aa13.38□□□□□ -0.27
VEGFA-205ENST00000372067 OR10AG1Q8NH19 301 aa13.38□□□□□ -0.27
VEGFA-205ENST00000372067 SRSF8Q9BRL6 282 aaKnown RBP13.38□□□□□ -0.27
VEGFA-205ENST00000372067 FSTL3O95633 263 aa13.38□□□□□ -0.27
VEGFA-205ENST00000372067 HIF1ANQ9NWT6 349 aa13.38□□□□□ -0.27
VEGFA-205ENST00000372067 OOSP1A8MZH6 123 aa13.38□□□□□ -0.27
VEGFA-205ENST00000372067 NDUFA3O95167 84 aa13.38□□□□□ -0.27
VEGFA-205ENST00000372067 RPL11P62913 178 aaKnown RBP13.38□□□□□ -0.27
VEGFA-205ENST00000372067 FANCD2OSQ96PS1 177 aa13.38□□□□□ -0.27
VEGFA-205ENST00000372067 CREBBPQ92793 2442 aa13.37□□□□□ -0.27
VEGFA-205ENST00000372067 IGHV7-81A0A0B4J1V7 117 aa13.37□□□□□ -0.27
VEGFA-205ENST00000372067 TMEM189A5PLL7 270 aa13.37□□□□□ -0.27
VEGFA-205ENST00000372067 FBLL1A6NHQ2 334 aaKnown RBP13.37□□□□□ -0.27
VEGFA-205ENST00000372067 VWC2LB2RUY7 222 aa13.37□□□□□ -0.27
VEGFA-205ENST00000372067 SIRPDQ9H106 197 aa13.37□□□□□ -0.27
VEGFA-205ENST00000372067 IGKV3-7A0A075B6H7 116 aa13.37□□□□□ -0.27
VEGFA-205ENST00000372067 A0A0G2JLM5 398 aa13.37□□□□□ -0.27
VEGFA-205ENST00000372067 TRBV7-9A0A0J9YWB2 115 aa13.37□□□□□ -0.27
VEGFA-205ENST00000372067 SMIM27A0A1W2PRY6 76 aa13.37□□□□□ -0.27
VEGFA-205ENST00000372067 URB1-AS1Q96HZ7 61 aa13.37□□□□□ -0.27
VEGFA-205ENST00000372067 TRBV19A0A075B6N1 114 aa13.36□□□□□ -0.27
VEGFA-205ENST00000372067 IGKV2-40A0A087WW87 121 aaPredicted RBP13.36□□□□□ -0.27
VEGFA-205ENST00000372067 IGKV2D-40P01614 121 aaPredicted RBP13.36□□□□□ -0.27
VEGFA-205ENST00000372067 Q86TA4 180 aa13.36□□□□□ -0.27
VEGFA-205ENST00000372067 RPL7P18124 248 aaKnown RBP13.36□□□□□ -0.27
VEGFA-205ENST00000372067 RAB37Q96AX2 223 aa13.36□□□□□ -0.27
VEGFA-205ENST00000372067 RNF183Q96D59 192 aa13.36□□□□□ -0.27
VEGFA-205ENST00000372067 H3BRN7 92 aa13.36□□□□□ -0.27
VEGFA-205ENST00000372067 LMO4P61968 165 aa13.36□□□□□ -0.27
VEGFA-205ENST00000372067 LINC00322Q6ZN03 302 aaPredicted RBP13.36□□□□□ -0.27
VEGFA-205ENST00000372067 NRGNQ92686 78 aa13.36□□□□□ -0.27
VEGFA-205ENST00000372067 C7orf69Q9H7B7 122 aa13.36□□□□□ -0.27
VEGFA-205ENST00000372067 J3KRW8 73 aa13.35□□□□□ -0.27
VEGFA-205ENST00000372067 HBBP68871 147 aa13.35□□□□□ -0.27
VEGFA-205ENST00000372067 Q8N9W7 124 aa13.35□□□□□ -0.27
VEGFA-205ENST00000372067 SPCS1Q9Y6A9 102 aa13.35□□□□□ -0.27
VEGFA-205ENST00000372067 POLQO75417 2590 aa13.35□□□□□ -0.27
VEGFA-205ENST00000372067 IGLV11-55A0A075B6I3 123 aa13.35□□□□□ -0.27
VEGFA-205ENST00000372067 C18orf15Q96N68 181 aa13.35□□□□□ -0.27
VEGFA-205ENST00000372067 TMEM70Q9BUB7 260 aa13.35□□□□□ -0.27
VEGFA-205ENST00000372067 IGHV4-61A0A0C4DH41 118 aa13.34□□□□□ -0.27
VEGFA-205ENST00000372067 LINC01548A6NM66 108 aa13.34□□□□□ -0.27
VEGFA-205ENST00000372067 NPIPB5A8MRT5 1133 aa13.34□□□□□ -0.27
VEGFA-205ENST00000372067 CRXO43186 299 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-205ENST00000372067 PRB1P04280 392 aa13.34□□□□□ -0.27
VEGFA-205ENST00000372067 Q8TAT8 98 aa13.34□□□□□ -0.27
VEGFA-205ENST00000372067 H3BRM9 83 aa13.34□□□□□ -0.27
VEGFA-205ENST00000372067 FAM110AQ9BQ89 295 aa13.34□□□□□ -0.27
VEGFA-205ENST00000372067 FOXI2Q6ZQN5 318 aa13.34□□□□□ -0.27
VEGFA-205ENST00000372067 A0A1W2PPM0 123 aa13.33□□□□□ -0.28
VEGFA-205ENST00000372067 TMEM97Q5BJF2 176 aa13.33□□□□□ -0.28
VEGFA-205ENST00000372067 TTC9CQ8N5M4 171 aa13.33□□□□□ -0.28
VEGFA-205ENST00000372067 SIVA1O15304 175 aa13.33□□□□□ -0.28
VEGFA-205ENST00000372067 IGHV3-11P01762 117 aa13.33□□□□□ -0.28
VEGFA-205ENST00000372067 INSL3P51460 131 aa13.33□□□□□ -0.28
VEGFA-205ENST00000372067 Q71RC1 249 aaPredicted RBP13.33□□□□□ -0.28
VEGFA-205ENST00000372067 PIP4P2Q8N4L2 257 aa13.33□□□□□ -0.28
VEGFA-205ENST00000372067 PMCHL2Q9BQD1 86 aa13.33□□□□□ -0.28
VEGFA-205ENST00000372067 OR11H12B2RN74 326 aa13.33□□□□□ -0.28
VEGFA-205ENST00000372067 HLA-DMBP28068 263 aa13.33□□□□□ -0.28
VEGFA-205ENST00000372067 KIR3DS1Q14943 382 aa13.33□□□□□ -0.28
VEGFA-205ENST00000372067 FAM231DQ6ZW35 169 aa13.33□□□□□ -0.28
VEGFA-205ENST00000372067 OR11H1Q8NG94 326 aa13.33□□□□□ -0.28
VEGFA-205ENST00000372067 OR11H2Q8NH07 326 aa13.33□□□□□ -0.28
VEGFA-205ENST00000372067 ORM1P02763 201 aa13.32□□□□□ -0.28
VEGFA-205ENST00000372067 TRGV3P03979 118 aa13.32□□□□□ -0.28
VEGFA-205ENST00000372067 RBPMS2Q6ZRY4 209 aaKnown RBP13.32□□□□□ -0.28
VEGFA-205ENST00000372067 SPAG8Q99932 426 aaPredicted RBP13.32□□□□□ -0.28
VEGFA-205ENST00000372067 TMEM14CQ9P0S9 112 aa13.32□□□□□ -0.28
VEGFA-205ENST00000372067 LRRK2Q5S007 2527 aa13.32□□□□□ -0.28
VEGFA-205ENST00000372067 CENPVL3A0A0U1RRI6 287 aa13.32□□□□□ -0.28
VEGFA-205ENST00000372067 PF4V1P10720 104 aa13.32□□□□□ -0.28
VEGFA-205ENST00000372067 C8orf49Q96NF6 230 aa13.32□□□□□ -0.28
VEGFA-205ENST00000372067 SEC11AP67812 179 aa13.31□□□□□ -0.28
VEGFA-205ENST00000372067 GDF5OSQ5U4N7 250 aa13.31□□□□□ -0.28
VEGFA-205ENST00000372067 PET117Q6UWS5 81 aa13.31□□□□□ -0.28
VEGFA-205ENST00000372067 ZNF414Q96IQ9 312 aa13.31□□□□□ -0.28
VEGFA-205ENST00000372067 NDFIP1Q9BT67 221 aa13.31□□□□□ -0.28
VEGFA-205ENST00000372067 BSNQ9UPA5 3926 aa13.31□□□□□ -0.28
VEGFA-205ENST00000372067 SYS1-DBNDD2H3BUS1 97 aa13.31□□□□□ -0.28
VEGFA-205ENST00000372067 MYCNOSP40205 109 aa13.31□□□□□ -0.28
VEGFA-205ENST00000372067 ADAMTSL5Q6ZMM2 481 aa13.31□□□□□ -0.28
VEGFA-205ENST00000372067 MAPK1IP1LQ8NDC0 245 aa13.31□□□□□ -0.28
VEGFA-205ENST00000372067 EEF1AKMT3Q96AZ1 226 aa13.31□□□□□ -0.28
VEGFA-205ENST00000372067 AP1S3Q96PC3 154 aa13.31□□□□□ -0.28
VEGFA-205ENST00000372067 LTAP01374 205 aa13.31□□□□□ -0.28
VEGFA-205ENST00000372067 SPANXB1Q9NS25 103 aaPredicted RBP13.31□□□□□ -0.28
VEGFA-205ENST00000372067 SOX21Q9Y651 276 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms