RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 IGKV1D-39P04432 117 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 RPL8P62917 257 aaKnown RBP5.41□□□□□ -1.54
CSDE1-204ENST00000369530 TIGITQ495A1 244 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 ZFAND6Q6FIF0 208 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 FAM53AQ6NSI3 398 aaPredicted RBP5.41□□□□□ -1.54
CSDE1-204ENST00000369530 PIP4P2Q8N4L2 257 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 SYT8Q8NBV8 401 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 IFI27L2Q9H2X8 130 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 UBTD1Q9HAC8 227 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 A0A1B0GX51 115 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 TAL2Q16559 108 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 LGALS9BQ3B8N2 356 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 LGALS9CQ6DKI2 356 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 FAM90A1Q86YD7 464 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 OR2T6Q8NHC8 308 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 OSR1Q8TAX0 266 aaPredicted RBP5.41□□□□□ -1.54
CSDE1-204ENST00000369530 GAFA1Q96PS6 74 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 C20orf78Q9BR46 151 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 IGKV1D-17A0A075B6S4 117 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 J3QLI3 93 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 LEPROTL1O95214 131 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 CRYGBP07316 175 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 NDUFV3P56181 108 aaKnown RBP5.41□□□□□ -1.54
CSDE1-204ENST00000369530 DIAPH2-AS1Q14236 149 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 KPRPQ5T749 579 aaPredicted RBP5.41□□□□□ -1.54
CSDE1-204ENST00000369530 ACP7Q6ZNF0 438 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 LINC00596Q86U02 117 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 LEAP2Q969E1 77 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 PIMREGQ9BSJ6 248 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 RAB9BQ9NP90 201 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 CACNG5Q9UF02 275 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 IGKV1-6A0A0C4DH72 117 aa5.4□□□□□ -1.54
CSDE1-204ENST00000369530 SLC35B1P78383 322 aa5.4□□□□□ -1.54
CSDE1-204ENST00000369530 CATR1Q13166 79 aa5.4□□□□□ -1.54
CSDE1-204ENST00000369530 KRTAP24-1Q3LI83 254 aa5.4□□□□□ -1.54
CSDE1-204ENST00000369530 SPINK9Q5DT21 86 aa5.4□□□□□ -1.54
CSDE1-204ENST00000369530 CFHR4Q92496 578 aa5.4□□□□□ -1.54
CSDE1-204ENST00000369530 CCL13Q99616 98 aa5.4□□□□□ -1.54
CSDE1-204ENST00000369530 C16orf95Q9H693 158 aa5.4□□□□□ -1.54
CSDE1-204ENST00000369530 YTHDF2Q9Y5A9 579 aaKnown RBP5.4□□□□□ -1.54
CSDE1-204ENST00000369530 C12orf77C9JDV5 145 aa5.4□□□□□ -1.54
CSDE1-204ENST00000369530 F8WDY8 70 aa5.4□□□□□ -1.54
CSDE1-204ENST00000369530 IGKV1-5P01602 117 aa5.4□□□□□ -1.54
CSDE1-204ENST00000369530 RBP4P02753 201 aa5.4□□□□□ -1.54
CSDE1-204ENST00000369530 RPS28P62857 69 aaKnown RBP5.4□□□□□ -1.54
CSDE1-204ENST00000369530 SPANXN5Q5MJ07 72 aa5.4□□□□□ -1.54
CSDE1-204ENST00000369530 CFAP126Q5VTH2 177 aa5.4□□□□□ -1.54
CSDE1-204ENST00000369530 PPDPFQ9H3Y8 114 aa5.4□□□□□ -1.54
CSDE1-204ENST00000369530 SLC25A10Q9UBX3 287 aaPredicted RBP5.4□□□□□ -1.54
CSDE1-204ENST00000369530 DNAH8Q96JB1 4490 aa5.4□□□□□ -1.54
CSDE1-204ENST00000369530 ABCA1O95477 2261 aa5.4□□□□□ -1.54
CSDE1-204ENST00000369530 A0A1W2PRE2 83 aa5.4□□□□□ -1.55
CSDE1-204ENST00000369530 ADARB2-AS1A8MUL3 147 aa5.4□□□□□ -1.55
CSDE1-204ENST00000369530 C17orf98A8MV24 154 aa5.4□□□□□ -1.55
CSDE1-204ENST00000369530 IGLL5B9A064 214 aa5.4□□□□□ -1.55
CSDE1-204ENST00000369530 RPL31P62899 125 aaKnown RBP5.4□□□□□ -1.55
CSDE1-204ENST00000369530 OR13A1Q8NGR1 328 aa5.4□□□□□ -1.55
CSDE1-204ENST00000369530 IDI2-AS1Q9NZ38 188 aa5.4□□□□□ -1.55
CSDE1-204ENST00000369530 RNF7Q9UBF6 113 aa5.4□□□□□ -1.55
CSDE1-204ENST00000369530 OOEPA6NGQ2 149 aa5.39□□□□□ -1.55
CSDE1-204ENST00000369530 SMIM9A6NGZ8 99 aa5.39□□□□□ -1.55
CSDE1-204ENST00000369530 RNF223E7ERA6 249 aa5.39□□□□□ -1.55
CSDE1-204ENST00000369530 MRGPRG-AS1Q2M3A8 158 aa5.39□□□□□ -1.55
CSDE1-204ENST00000369530 GAGE13Q4V321 117 aa5.39□□□□□ -1.55
CSDE1-204ENST00000369530 DUX4L9Q6RFH8 374 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-204ENST00000369530 LINC00173Q6ZV60 143 aa5.39□□□□□ -1.55
CSDE1-204ENST00000369530 INAFM1C9JVW0 142 aa5.39□□□□□ -1.55
CSDE1-204ENST00000369530 INSL3P51460 131 aa5.39□□□□□ -1.55
CSDE1-204ENST00000369530 ZNF747Q9BV97 191 aa5.39□□□□□ -1.55
CSDE1-204ENST00000369530 C7orf69Q9H7B7 122 aa5.39□□□□□ -1.55
CSDE1-204ENST00000369530 ZNF331Q9NQX6 463 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-204ENST00000369530 ZNF580Q9UK33 172 aa5.39□□□□□ -1.55
CSDE1-204ENST00000369530 TMEM262E9PQX1 116 aa5.39□□□□□ -1.55
CSDE1-204ENST00000369530 FCGR3BO75015 233 aa5.39□□□□□ -1.55
CSDE1-204ENST00000369530 TGFAP01135 160 aa5.39□□□□□ -1.55
CSDE1-204ENST00000369530 PRTN3P24158 256 aa5.39□□□□□ -1.55
CSDE1-204ENST00000369530 G6PCP35575 357 aa5.39□□□□□ -1.55
CSDE1-204ENST00000369530 LINC00205P59089 165 aa5.39□□□□□ -1.55
CSDE1-204ENST00000369530 HILS1P60008 231 aa5.39□□□□□ -1.55
CSDE1-204ENST00000369530 EIF4EBP1Q13541 118 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-204ENST00000369530 LYPD2Q6UXB3 125 aa5.39□□□□□ -1.55
CSDE1-204ENST00000369530 ZNF497Q6ZNH5 498 aa5.39□□□□□ -1.55
CSDE1-204ENST00000369530 PQLC2Q6ZP29 291 aa5.39□□□□□ -1.55
CSDE1-204ENST00000369530 H2BFWTQ7Z2G1 175 aa5.39□□□□□ -1.55
CSDE1-204ENST00000369530 DRAM1Q8N682 238 aa5.39□□□□□ -1.55
CSDE1-204ENST00000369530 RASL10AQ92737 203 aa5.39□□□□□ -1.55
CSDE1-204ENST00000369530 TPPP3Q9BW30 176 aa5.39□□□□□ -1.55
CSDE1-204ENST00000369530 FNDC10F2Z333 226 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 RRHO14718 337 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 IGLV2-14P01704 120 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 ASIPP42127 132 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 SMCPP49901 116 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-204ENST00000369530 ETDBQ3ZM63 59 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 CT83Q5H943 113 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 RNASEKQ6P5S7 137 aaKnown RBP5.38□□□□□ -1.55
CSDE1-204ENST00000369530 TRAT1Q6PIZ9 186 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 CD177Q8N6Q3 437 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 LINC01356Q8N9X3 169 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 ARPC1AQ92747 370 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 PKHD1P08F94 4074 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms