RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 C1orf194Q5T5A4 169 aa6.66□□□□□ -1.34
TPM3-213ENST00000368545 C5orf17Q8NAS9 161 aa6.66□□□□□ -1.34
TPM3-213ENST00000368545 OR4X2Q8NGF9 303 aa6.66□□□□□ -1.34
TPM3-213ENST00000368545 MRAPQ8TCY5 172 aa6.66□□□□□ -1.34
TPM3-213ENST00000368545 ZNF414Q96IQ9 312 aa6.66□□□□□ -1.34
TPM3-213ENST00000368545 TUBA4BQ9H853 241 aa6.66□□□□□ -1.34
TPM3-213ENST00000368545 OTORQ9NRC9 128 aa6.66□□□□□ -1.34
TPM3-213ENST00000368545 IGHV3-35A0A0C4DH35 117 aa6.65□□□□□ -1.34
TPM3-213ENST00000368545 MRPS12O15235 138 aaKnown RBP6.65□□□□□ -1.34
TPM3-213ENST00000368545 AKR1C3P42330 323 aa6.65□□□□□ -1.34
TPM3-213ENST00000368545 RPL35P42766 123 aaKnown RBP6.65□□□□□ -1.34
TPM3-213ENST00000368545 RANP62826 216 aaKnown RBP6.65□□□□□ -1.34
TPM3-213ENST00000368545 RPL23P62829 140 aaKnown RBP6.65□□□□□ -1.34
TPM3-213ENST00000368545 ADIRFQ15847 76 aa6.65□□□□□ -1.34
TPM3-213ENST00000368545 CBLN2Q8IUK8 224 aa6.65□□□□□ -1.34
TPM3-213ENST00000368545 OR8I2Q8N0Y5 310 aa6.65□□□□□ -1.34
TPM3-213ENST00000368545 MYOZ3Q8TDC0 251 aa6.65□□□□□ -1.34
TPM3-213ENST00000368545 CITED1Q99966 193 aa6.65□□□□□ -1.34
TPM3-213ENST00000368545 DERL1Q9BUN8 251 aa6.65□□□□□ -1.34
TPM3-213ENST00000368545 Q9H3A6 140 aa6.65□□□□□ -1.34
TPM3-213ENST00000368545 TMEM242Q9NWH2 141 aa6.65□□□□□ -1.34
TPM3-213ENST00000368545 ZNF586Q9NXT0 402 aa6.65□□□□□ -1.34
TPM3-213ENST00000368545 PEF1Q9UBV8 284 aaKnown RBP6.65□□□□□ -1.34
TPM3-213ENST00000368545 PGPA6NDG6 321 aa6.65□□□□□ -1.35
TPM3-213ENST00000368545 HELTA6NFD8 242 aa6.65□□□□□ -1.35
TPM3-213ENST00000368545 PEX7O00628 323 aa6.65□□□□□ -1.35
TPM3-213ENST00000368545 BUB3O43684 328 aa6.65□□□□□ -1.35
TPM3-213ENST00000368545 GGCTO75223 188 aaKnown RBP6.65□□□□□ -1.35
TPM3-213ENST00000368545 ZNF253O75346 499 aa6.65□□□□□ -1.35
TPM3-213ENST00000368545 MT-ND4LP03901 98 aa6.65□□□□□ -1.35
TPM3-213ENST00000368545 SLC25A5P05141 298 aaKnown RBP6.65□□□□□ -1.35
TPM3-213ENST00000368545 TAS2R60P59551 318 aa6.65□□□□□ -1.35
TPM3-213ENST00000368545 LINC01551Q86U37 167 aa6.65□□□□□ -1.35
TPM3-213ENST00000368545 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.65□□□□□ -1.35
TPM3-213ENST00000368545 DUX5Q96PT3 197 aa6.65□□□□□ -1.35
TPM3-213ENST00000368545 CHTOPQ9Y3Y2 248 aaKnown RBP6.65□□□□□ -1.35
TPM3-213ENST00000368545 CLPSL1A2RUU4 121 aa6.64□□□□□ -1.35
TPM3-213ENST00000368545 IGHV3-11P01762 117 aa6.64□□□□□ -1.35
TPM3-213ENST00000368545 S100A9P06702 114 aaKnown RBP6.64□□□□□ -1.35
TPM3-213ENST00000368545 GALR1P47211 349 aa6.64□□□□□ -1.35
TPM3-213ENST00000368545 GNG4P50150 75 aa6.64□□□□□ -1.35
TPM3-213ENST00000368545 MEOX2P50222 304 aa6.64□□□□□ -1.35
TPM3-213ENST00000368545 PSG9Q00887 426 aa6.64□□□□□ -1.35
TPM3-213ENST00000368545 ODF3L2Q3SX64 289 aa6.64□□□□□ -1.35
TPM3-213ENST00000368545 C15orf54Q8N8G6 183 aa6.64□□□□□ -1.35
TPM3-213ENST00000368545 EPDR1Q9UM22 224 aa6.64□□□□□ -1.35
TPM3-213ENST00000368545 MGAM2Q2M2H8 2515 aa6.64□□□□□ -1.35
TPM3-213ENST00000368545 TRBV20OR9-2A0A075B6H5 130 aa6.64□□□□□ -1.35
TPM3-213ENST00000368545 IGHV4-28A0A0C4DH34 117 aa6.64□□□□□ -1.35
TPM3-213ENST00000368545 TRBV12-3P01733 135 aa6.64□□□□□ -1.35
TPM3-213ENST00000368545 CRYBA1P05813 215 aa6.64□□□□□ -1.35
TPM3-213ENST00000368545 CMTM2Q8TAZ6 248 aa6.64□□□□□ -1.35
TPM3-213ENST00000368545 SMIM12Q96EX1 92 aa6.64□□□□□ -1.35
TPM3-213ENST00000368545 UBE2E2Q96LR5 201 aa6.64□□□□□ -1.35
TPM3-213ENST00000368545 IGHV3OR16-8A0A075B7F1 116 aa6.63□□□□□ -1.35
TPM3-213ENST00000368545 PPP1R2P9O14990 202 aa6.63□□□□□ -1.35
TPM3-213ENST00000368545 LGALS1P09382 135 aaKnown RBP6.63□□□□□ -1.35
TPM3-213ENST00000368545 UBE2G1P62253 170 aa6.63□□□□□ -1.35
TPM3-213ENST00000368545 RNF212Q495C1 297 aa6.63□□□□□ -1.35
TPM3-213ENST00000368545 FAM106AQ4KMX7 169 aa6.63□□□□□ -1.35
TPM3-213ENST00000368545 CENPWQ5EE01 88 aa6.63□□□□□ -1.35
TPM3-213ENST00000368545 KLHDC1Q8N7A1 406 aa6.63□□□□□ -1.35
TPM3-213ENST00000368545 FMC1Q96HJ9 113 aa6.63□□□□□ -1.35
TPM3-213ENST00000368545 URB1-AS1Q96HZ7 61 aa6.63□□□□□ -1.35
TPM3-213ENST00000368545 ESM1Q9NQ30 184 aa6.63□□□□□ -1.35
TPM3-213ENST00000368545 SERTM2A0A1B0GWG4 89 aa6.62□□□□□ -1.35
TPM3-213ENST00000368545 A0A1W2PS18 150 aa6.62□□□□□ -1.35
TPM3-213ENST00000368545 K7EQM0 130 aa6.62□□□□□ -1.35
TPM3-213ENST00000368545 CCL24O00175 119 aa6.62□□□□□ -1.35
TPM3-213ENST00000368545 TCRAP04437 139 aa6.62□□□□□ -1.35
TPM3-213ENST00000368545 SNRPCP09234 159 aaKnown RBP6.62□□□□□ -1.35
TPM3-213ENST00000368545 TMEM183BQ1AE95 376 aa6.62□□□□□ -1.35
TPM3-213ENST00000368545 C10orf99Q6UWK7 81 aa6.62□□□□□ -1.35
TPM3-213ENST00000368545 GPHB5Q86YW7 130 aa6.62□□□□□ -1.35
TPM3-213ENST00000368545 ISOC2Q96AB3 205 aa6.62□□□□□ -1.35
TPM3-213ENST00000368545 IGF2BP2-AS1Q96M15 143 aa6.62□□□□□ -1.35
TPM3-213ENST00000368545 SLC50A1Q9BRV3 221 aa6.62□□□□□ -1.35
TPM3-213ENST00000368545 DAZ1Q9NQZ3 744 aaKnown RBP6.62□□□□□ -1.35
TPM3-213ENST00000368545 H3BTX0 84 aa6.62□□□□□ -1.35
TPM3-213ENST00000368545 BMI1P35226 326 aa6.62□□□□□ -1.35
TPM3-213ENST00000368545 RPEL1Q2QD12 228 aa6.62□□□□□ -1.35
TPM3-213ENST00000368545 EXOC3-AS1Q8N2X6 119 aa6.62□□□□□ -1.35
TPM3-213ENST00000368545 SFRP2Q96HF1 295 aa6.62□□□□□ -1.35
TPM3-213ENST00000368545 KLF12Q9Y4X4 402 aa6.62□□□□□ -1.35
TPM3-213ENST00000368545 H7BYZ3 331 aa6.61□□□□□ -1.35
TPM3-213ENST00000368545 K7EMT4 169 aa6.61□□□□□ -1.35
TPM3-213ENST00000368545 SLC17A3O00476 420 aa6.61□□□□□ -1.35
TPM3-213ENST00000368545 CSN1S1P47710 185 aa6.61□□□□□ -1.35
TPM3-213ENST00000368545 PROK1P58294 105 aa6.61□□□□□ -1.35
TPM3-213ENST00000368545 GNG5P63218 68 aa6.61□□□□□ -1.35
TPM3-213ENST00000368545 UNQ9165/PRO28630Q6UXU0 137 aa6.61□□□□□ -1.35
TPM3-213ENST00000368545 C17orf77Q96MU5 243 aa6.61□□□□□ -1.35
TPM3-213ENST00000368545 C16orf95Q9H693 158 aa6.61□□□□□ -1.35
TPM3-213ENST00000368545 RPH3ALQ9UNE2 315 aa6.61□□□□□ -1.35
TPM3-213ENST00000368545 UFC1Q9Y3C8 167 aa6.61□□□□□ -1.35
TPM3-213ENST00000368545 NOTCH1P46531 2555 aa6.61□□□□□ -1.35
TPM3-213ENST00000368545 TRBV6-1A0A0K0K1D8 114 aa6.61□□□□□ -1.35
TPM3-213ENST00000368545 FBLL1A6NHQ2 334 aaKnown RBP6.61□□□□□ -1.35
TPM3-213ENST00000368545 TMEM75Q8N9X5 138 aa6.61□□□□□ -1.35
TPM3-213ENST00000368545 OR5B12Q96R08 314 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms