RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 MYOZ3Q8TDC0 251 aa9.41□□□□□ -0.9
CAPN9-203ENST00000366666 KCNS1Q96KK3 526 aa9.41□□□□□ -0.9
CAPN9-203ENST00000366666 TRBV7-1A0A0A6YYK4 115 aa9.4□□□□□ -0.9
CAPN9-203ENST00000366666 A0A1W2PRE2 83 aa9.4□□□□□ -0.9
CAPN9-203ENST00000366666 DIRC3C9JPN6 131 aa9.4□□□□□ -0.9
CAPN9-203ENST00000366666 CRYBB3P26998 211 aa9.4□□□□□ -0.9
CAPN9-203ENST00000366666 FCGR2BP31994 310 aaPredicted RBP9.4□□□□□ -0.9
CAPN9-203ENST00000366666 USMG5Q96IX5 58 aa9.4□□□□□ -0.9
CAPN9-203ENST00000366666 SMIM27A0A1W2PRY6 76 aa9.4□□□□□ -0.91
CAPN9-203ENST00000366666 K7ERU9 68 aa9.4□□□□□ -0.91
CAPN9-203ENST00000366666 ZNF253O75346 499 aa9.4□□□□□ -0.91
CAPN9-203ENST00000366666 ELANEP08246 267 aa9.4□□□□□ -0.91
CAPN9-203ENST00000366666 ORM2P19652 201 aa9.4□□□□□ -0.91
CAPN9-203ENST00000366666 TSPOP30536 169 aa9.4□□□□□ -0.91
CAPN9-203ENST00000366666 BMI1P35226 326 aa9.4□□□□□ -0.91
CAPN9-203ENST00000366666 TCF24Q7RTU0 167 aa9.4□□□□□ -0.91
CAPN9-203ENST00000366666 RNF152Q8N8N0 203 aa9.4□□□□□ -0.91
CAPN9-203ENST00000366666 NRN1Q9NPD7 142 aa9.4□□□□□ -0.91
CAPN9-203ENST00000366666 RPH3ALQ9UNE2 315 aa9.4□□□□□ -0.91
CAPN9-203ENST00000366666 A0A1W2PS18 150 aa9.39□□□□□ -0.91
CAPN9-203ENST00000366666 F2Z2F3 143 aa9.39□□□□□ -0.91
CAPN9-203ENST00000366666 NDUFA7O95182 113 aa9.39□□□□□ -0.91
CAPN9-203ENST00000366666 CD28P10747 220 aa9.39□□□□□ -0.91
CAPN9-203ENST00000366666 KRTAP10-3P60369 221 aa9.39□□□□□ -0.91
CAPN9-203ENST00000366666 KRTDAPP60985 99 aa9.39□□□□□ -0.91
CAPN9-203ENST00000366666 RASL11AQ6T310 242 aa9.39□□□□□ -0.91
CAPN9-203ENST00000366666 RNF114Q9Y508 228 aa9.39□□□□□ -0.91
CAPN9-203ENST00000366666 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.39□□□□□ -0.91
CAPN9-203ENST00000366666 TMEM89A2RUT3 159 aa9.39□□□□□ -0.91
CAPN9-203ENST00000366666 IZUMO1RA6ND01 250 aa9.39□□□□□ -0.91
CAPN9-203ENST00000366666 M0QZ24 198 aa9.39□□□□□ -0.91
CAPN9-203ENST00000366666 BMPR1BO00238 502 aa9.39□□□□□ -0.91
CAPN9-203ENST00000366666 FRMD6-AS1P0C7T7 363 aa9.39□□□□□ -0.91
CAPN9-203ENST00000366666 ARL3P36405 182 aa9.39□□□□□ -0.91
CAPN9-203ENST00000366666 AMTP48728 403 aa9.39□□□□□ -0.91
CAPN9-203ENST00000366666 PROK1P58294 105 aa9.39□□□□□ -0.91
CAPN9-203ENST00000366666 LYZP61626 148 aa9.39□□□□□ -0.91
CAPN9-203ENST00000366666 DEFB136Q30KP8 78 aa9.39□□□□□ -0.91
CAPN9-203ENST00000366666 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.39□□□□□ -0.91
CAPN9-203ENST00000366666 OR1B1Q8NGR6 318 aa9.39□□□□□ -0.91
CAPN9-203ENST00000366666 WNK1Q9H4A3 2382 aa9.38□□□□□ -0.91
CAPN9-203ENST00000366666 TRAV5A0A0B4J249 113 aa9.38□□□□□ -0.91
CAPN9-203ENST00000366666 A0A0G2JLM5 398 aa9.38□□□□□ -0.91
CAPN9-203ENST00000366666 ZNF324O75467 553 aaPredicted RBP9.38□□□□□ -0.91
CAPN9-203ENST00000366666 IGLV2-8P01709 118 aa9.38□□□□□ -0.91
CAPN9-203ENST00000366666 IL4P05112 153 aa9.38□□□□□ -0.91
CAPN9-203ENST00000366666 ZNF503Q96F45 646 aa9.38□□□□□ -0.91
CAPN9-203ENST00000366666 MRPL32Q9BYC8 188 aaKnown RBP9.38□□□□□ -0.91
CAPN9-203ENST00000366666 C8orf88P0DMB2 117 aa9.37□□□□□ -0.91
CAPN9-203ENST00000366666 KHDC1LQ5JSQ8 128 aa9.37□□□□□ -0.91
CAPN9-203ENST00000366666 IBA57Q5T440 356 aaKnown RBP9.37□□□□□ -0.91
CAPN9-203ENST00000366666 UNQ9165/PRO28630Q6UXU0 137 aa9.37□□□□□ -0.91
CAPN9-203ENST00000366666 PRIMA1Q86XR5 153 aa9.37□□□□□ -0.91
CAPN9-203ENST00000366666 IGF2BP2-AS1Q96M15 143 aa9.37□□□□□ -0.91
CAPN9-203ENST00000366666 DUX3Q96PT4 197 aa9.37□□□□□ -0.91
CAPN9-203ENST00000366666 RNASE7Q9H1E1 156 aaKnown RBP9.37□□□□□ -0.91
CAPN9-203ENST00000366666 ZFAND3Q9H8U3 227 aa9.37□□□□□ -0.91
CAPN9-203ENST00000366666 WI2-2373I1.2A0A1W2PRP0 233 aa9.37□□□□□ -0.91
CAPN9-203ENST00000366666 OR7C2O60412 319 aa9.37□□□□□ -0.91
CAPN9-203ENST00000366666 APCSP02743 223 aa9.37□□□□□ -0.91
CAPN9-203ENST00000366666 RNF125Q96EQ8 232 aa9.37□□□□□ -0.91
CAPN9-203ENST00000366666 UBE2E2Q96LR5 201 aa9.37□□□□□ -0.91
CAPN9-203ENST00000366666 CITED2Q99967 270 aaPredicted RBP9.37□□□□□ -0.91
CAPN9-203ENST00000366666 ZNF331Q9NQX6 463 aaPredicted RBP9.37□□□□□ -0.91
CAPN9-203ENST00000366666 A0A1W2PRX2 142 aa9.36□□□□□ -0.91
CAPN9-203ENST00000366666 CLPSL1A2RUU4 121 aa9.36□□□□□ -0.91
CAPN9-203ENST00000366666 GGTLC3B5MD39 225 aa9.36□□□□□ -0.91
CAPN9-203ENST00000366666 ZNF207O43670 478 aaKnown RBP9.36□□□□□ -0.91
CAPN9-203ENST00000366666 COX7A2P2O60397 106 aa9.36□□□□□ -0.91
CAPN9-203ENST00000366666 SRIP30626 198 aa9.36□□□□□ -0.91
CAPN9-203ENST00000366666 PMCHL1Q16048 86 aa9.36□□□□□ -0.91
CAPN9-203ENST00000366666 PET117Q6UWS5 81 aa9.36□□□□□ -0.91
CAPN9-203ENST00000366666 FAM231DQ6ZW35 169 aa9.36□□□□□ -0.91
CAPN9-203ENST00000366666 PEF1Q9UBV8 284 aaKnown RBP9.36□□□□□ -0.91
CAPN9-203ENST00000366666 IGHV4OR15-8A0A075B7B6 117 aa9.36□□□□□ -0.91
CAPN9-203ENST00000366666 A0A087WW49 117 aa9.36□□□□□ -0.91
CAPN9-203ENST00000366666 EDN2P20800 178 aa9.36□□□□□ -0.91
CAPN9-203ENST00000366666 PLP1P60201 277 aa9.36□□□□□ -0.91
CAPN9-203ENST00000366666 C10orf113Q5VZT2 155 aa9.36□□□□□ -0.91
CAPN9-203ENST00000366666 LINC00305Q7Z4B0 112 aa9.36□□□□□ -0.91
CAPN9-203ENST00000366666 BORCS7Q96B45 105 aa9.36□□□□□ -0.91
CAPN9-203ENST00000366666 SPINK4O60575 86 aa9.35□□□□□ -0.91
CAPN9-203ENST00000366666 LGALS1P09382 135 aaKnown RBP9.35□□□□□ -0.91
CAPN9-203ENST00000366666 C3orf79P0CE67 100 aa9.35□□□□□ -0.91
CAPN9-203ENST00000366666 PMCHP20382 165 aa9.35□□□□□ -0.91
CAPN9-203ENST00000366666 HINT1P49773 126 aaPredicted RBP9.35□□□□□ -0.91
CAPN9-203ENST00000366666 VAMP3Q15836 100 aa9.35□□□□□ -0.91
CAPN9-203ENST00000366666 KIAA1644Q3SXP7 199 aa9.35□□□□□ -0.91
CAPN9-203ENST00000366666 PRR27Q6MZM9 219 aa9.35□□□□□ -0.91
CAPN9-203ENST00000366666 NIT1Q86X76 327 aa9.35□□□□□ -0.91
CAPN9-203ENST00000366666 TSKUQ8WUA8 353 aa9.35□□□□□ -0.91
CAPN9-203ENST00000366666 RCHY1Q96PM5 261 aa9.35□□□□□ -0.91
CAPN9-203ENST00000366666 VWFP04275 2813 aa9.34□□□□□ -0.91
CAPN9-203ENST00000366666 IGHV3OR16-13A0A075B7E8 117 aa9.34□□□□□ -0.91
CAPN9-203ENST00000366666 IGHV3-49A0A0A0MS15 119 aa9.34□□□□□ -0.91
CAPN9-203ENST00000366666 IGHV3-74A0A0B4J1X5 117 aa9.34□□□□□ -0.91
CAPN9-203ENST00000366666 APOHP02749 345 aaPredicted RBP9.34□□□□□ -0.91
CAPN9-203ENST00000366666 MGST1P10620 155 aaKnown RBP9.34□□□□□ -0.91
CAPN9-203ENST00000366666 C16orf54Q6UWD8 224 aa9.34□□□□□ -0.91
CAPN9-203ENST00000366666 C8orf86Q6ZUL3 223 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms