RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 TCTAP57738 103 aa0.06□□□□□ -2.4
RNU6-428P-201ENST00000362942 LINC00269Q8N2A0 174 aa0.06□□□□□ -2.4
RNU6-428P-201ENST00000362942 PLEKHB2Q96CS7 222 aa0.06□□□□□ -2.4
RNU6-428P-201ENST00000362942 DSTQ03001 7570 aaKnown RBP0.05□□□□□ -2.4
RNU6-428P-201ENST00000362942 BBIP1A8MTZ0 92 aa0.05□□□□□ -2.4
RNU6-428P-201ENST00000362942 TRACP01848 142 aa0.05□□□□□ -2.4
RNU6-428P-201ENST00000362942 EVI2AP22794 236 aa0.05□□□□□ -2.4
RNU6-428P-201ENST00000362942 NDUFA6P56556 154 aa0.05□□□□□ -2.4
RNU6-428P-201ENST00000362942 ISOC1Q96CN7 298 aa0.05□□□□□ -2.4
RNU6-428P-201ENST00000362942 CIB3Q96Q77 187 aaPredicted RBP0.05□□□□□ -2.4
RNU6-428P-201ENST00000362942 ANKRD31Q8N7Z5 1873 aa0.04□□□□□ -2.4
RNU6-428P-201ENST00000362942 C3orf85A0A1B0GTC6 90 aa0.04□□□□□ -2.4
RNU6-428P-201ENST00000362942 ARL5CA6NH57 179 aa0.04□□□□□ -2.4
RNU6-428P-201ENST00000362942 CD3DP04234 171 aa0.04□□□□□ -2.4
RNU6-428P-201ENST00000362942 SNRPD3P62318 126 aaKnown RBP0.04□□□□□ -2.4
RNU6-428P-201ENST00000362942 MRPS15P82914 257 aaKnown RBP0.04□□□□□ -2.4
RNU6-428P-201ENST00000362942 IZUMO2Q6UXV1 221 aa0.04□□□□□ -2.4
RNU6-428P-201ENST00000362942 ZCCHC23Q6ZST2 131 aa0.04□□□□□ -2.4
RNU6-428P-201ENST00000362942 C3orf62Q6ZUJ4 267 aa0.04□□□□□ -2.4
RNU6-428P-201ENST00000362942 BORCS8Q96FH0 119 aa0.04□□□□□ -2.4
RNU6-428P-201ENST00000362942 SS18L2Q9UHA2 77 aa0.04□□□□□ -2.4
RNU6-428P-201ENST00000362942 YTHDC2Q9H6S0 1430 aaKnown RBP0.04□□□□□ -2.4
RNU6-428P-201ENST00000362942 TRAPPC8Q9Y2L5 1435 aa0.04□□□□□ -2.4
RNU6-428P-201ENST00000362942 ANK1P16157 1881 aa0.03□□□□□ -2.4
RNU6-428P-201ENST00000362942 PFDN1O60925 122 aa0.03□□□□□ -2.4
RNU6-428P-201ENST00000362942 CSN2P05814 226 aa0.03□□□□□ -2.4
RNU6-428P-201ENST00000362942 TPT1P13693 172 aaKnown RBP0.03□□□□□ -2.4
RNU6-428P-201ENST00000362942 RPL37P61927 97 aaKnown RBP0.03□□□□□ -2.4
RNU6-428P-201ENST00000362942 GNG3P63215 75 aa0.03□□□□□ -2.4
RNU6-428P-201ENST00000362942 CCSMST1Q4G0I0 132 aa0.03□□□□□ -2.4
RNU6-428P-201ENST00000362942 GLYATL3Q5SZD4 288 aa0.03□□□□□ -2.4
RNU6-428P-201ENST00000362942 LYG2Q86SG7 212 aa0.03□□□□□ -2.4
RNU6-428P-201ENST00000362942 STX19Q8N4C7 294 aa0.03□□□□□ -2.4
RNU6-428P-201ENST00000362942 FAM24BQ8N5W8 94 aa0.03□□□□□ -2.4
RNU6-428P-201ENST00000362942 TCTEX1D1Q8N7M0 179 aa0.03□□□□□ -2.4
RNU6-428P-201ENST00000362942 TMEM229BQ8NBD8 167 aa0.03□□□□□ -2.4
RNU6-428P-201ENST00000362942 CCL4L1Q8NHW4 92 aa0.03□□□□□ -2.4
RNU6-428P-201ENST00000362942 SPRR2GQ9BYE4 73 aa0.03□□□□□ -2.4
RNU6-428P-201ENST00000362942 IL20Q9NYY1 176 aa0.03□□□□□ -2.4
RNU6-428P-201ENST00000362942 MRPL35Q9NZE8 188 aaKnown RBP0.03□□□□□ -2.4
RNU6-428P-201ENST00000362942 MED11Q9P086 117 aa0.03□□□□□ -2.4
RNU6-428P-201ENST00000362942 NUBP2Q9Y5Y2 271 aa0.03□□□□□ -2.4
RNU6-428P-201ENST00000362942 RBBP6Q7Z6E9 1792 aaKnown RBP0.03□□□□□ -2.4
RNU6-428P-201ENST00000362942 TRPM7Q96QT4 1865 aa0.03□□□□□ -2.41
RNU6-428P-201ENST00000362942 FAT4Q6V0I7 4981 aa0.02□□□□□ -2.41
RNU6-428P-201ENST00000362942 A0A1W2PPB8 328 aa0.02□□□□□ -2.41
RNU6-428P-201ENST00000362942 A0A1W2PRS3 328 aa0.02□□□□□ -2.41
RNU6-428P-201ENST00000362942 KIR3DP1A8MWS1 328 aa0.02□□□□□ -2.41
RNU6-428P-201ENST00000362942 MFSD11O43934 449 aa0.02□□□□□ -2.41
RNU6-428P-201ENST00000362942 LY6G6CO95867 125 aa0.02□□□□□ -2.41
RNU6-428P-201ENST00000362942 SAA1P0DJI8 122 aaPredicted RBP0.02□□□□□ -2.41
RNU6-428P-201ENST00000362942 FABP2P12104 132 aa0.02□□□□□ -2.41
RNU6-428P-201ENST00000362942 DNAJB13P59910 316 aa0.02□□□□□ -2.41
RNU6-428P-201ENST00000362942 ANGPTL5Q86XS5 388 aa0.02□□□□□ -2.41
RNU6-428P-201ENST00000362942 OR5H6Q8NGV6 325 aa0.02□□□□□ -2.41
RNU6-428P-201ENST00000362942 DIRC1Q969H9 104 aa0.02□□□□□ -2.41
RNU6-428P-201ENST00000362942 BIN3Q9NQY0 253 aa0.02□□□□□ -2.41
RNU6-428P-201ENST00000362942 DSPPQ9NZW4 1301 aa0.02□□□□□ -2.41
RNU6-428P-201ENST00000362942 EIF3AQ14152 1382 aaKnown RBP0.02□□□□□ -2.41
RNU6-428P-201ENST00000362942 ZDBF2Q9HCK1 2354 aa0.02□□□□□ -2.41
RNU6-428P-201ENST00000362942 USP54Q70EL1 1684 aa0.02□□□□□ -2.41
RNU6-428P-201ENST00000362942 MYH3P11055 1940 aa0.01□□□□□ -2.41
RNU6-428P-201ENST00000362942 LTC4SQ16873 150 aa0.01□□□□□ -2.41
RNU6-428P-201ENST00000362942 DYDC1Q8WWB3 177 aa0.01□□□□□ -2.41
RNU6-428P-201ENST00000362942 AP3S1Q92572 193 aa0.01□□□□□ -2.41
RNU6-428P-201ENST00000362942 C19orf12Q9NSK7 152 aa0.01□□□□□ -2.41
RNU6-428P-201ENST00000362942 LAMTOR2Q9Y2Q5 125 aa0.01□□□□□ -2.41
RNU6-428P-201ENST00000362942 ZCCHC11Q5TAX3 1644 aaKnown RBP0.01□□□□□ -2.41
RNU6-428P-201ENST00000362942 CTTNBP2Q8WZ74 1663 aa0.01□□□□□ -2.41
RNU6-428P-201ENST00000362942 NUP210Q8TEM1 1887 aaPredicted RBP0.01□□□□□ -2.41
RNU6-428P-201ENST00000362942 LOC107986453A0A1B0GWG9 222 aa0□□□□□ -2.41
RNU6-428P-201ENST00000362942 HIGD1CA8MV81 97 aa0□□□□□ -2.41
RNU6-428P-201ENST00000362942 SDC2P34741 201 aa0□□□□□ -2.41
RNU6-428P-201ENST00000362942 AFDNP55196 1824 aaKnown RBP0□□□□□ -2.41
RNU6-428P-201ENST00000362942 TAS2R41P59536 307 aa0□□□□□ -2.41
RNU6-428P-201ENST00000362942 MAXP61244 160 aa0□□□□□ -2.41
RNU6-428P-201ENST00000362942 LSM3P62310 102 aaKnown RBP0□□□□□ -2.41
RNU6-428P-201ENST00000362942 BASP1P80723 227 aaKnown RBP0□□□□□ -2.41
RNU6-428P-201ENST00000362942 DEFB132Q7Z7B7 95 aa0□□□□□ -2.41
RNU6-428P-201ENST00000362942 CLEC2BQ92478 149 aa0□□□□□ -2.41
RNU6-428P-201ENST00000362942 PRELID3AQ96N28 172 aa0□□□□□ -2.41
RNU6-428P-201ENST00000362942 LRTM1Q9HBL6 345 aa0□□□□□ -2.41
RNU6-428P-201ENST00000362942 OTORQ9NRC9 128 aa0□□□□□ -2.41
RNU6-428P-201ENST00000362942 MPC1Q9Y5U8 109 aa0□□□□□ -2.41
RNU6-428P-201ENST00000362942 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.01□□□□□ -2.41
RNU6-428P-201ENST00000362942 ANKRD17O75179 2603 aaKnown RBP-0.01□□□□□ -2.41
RNU6-428P-201ENST00000362942 TRDV1A0A1B0GX56 115 aa-0.01□□□□□ -2.41
RNU6-428P-201ENST00000362942 IFITM5A6NNB3 132 aa-0.01□□□□□ -2.41
RNU6-428P-201ENST00000362942 FXYD1O00168 92 aa-0.01□□□□□ -2.41
RNU6-428P-201ENST00000362942 SPINK1P00995 79 aa-0.01□□□□□ -2.41
RNU6-428P-201ENST00000362942 IGF2P01344 180 aa-0.01□□□□□ -2.41
RNU6-428P-201ENST00000362942 BCL2P10415 239 aa-0.01□□□□□ -2.41
RNU6-428P-201ENST00000362942 GLRXP35754 106 aa-0.01□□□□□ -2.41
RNU6-428P-201ENST00000362942 SRP9P49458 86 aaKnown RBP-0.01□□□□□ -2.41
RNU6-428P-201ENST00000362942 FXYD3Q14802 87 aa-0.01□□□□□ -2.41
RNU6-428P-201ENST00000362942 ZNF56Q15929 161 aa-0.01□□□□□ -2.41
RNU6-428P-201ENST00000362942 SMIM20Q8N5G0 67 aa-0.01□□□□□ -2.41
RNU6-428P-201ENST00000362942 OR8J3Q8NGG0 315 aa-0.01□□□□□ -2.41
RNU6-428P-201ENST00000362942 LINC00208Q96KT6 92 aa-0.01□□□□□ -2.41
RNU6-428P-201ENST00000362942 MRPL36Q9P0J6 103 aaKnown RBP-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms