RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 KHDC1LQ5JSQ8 128 aa8.21□□□□□ -1.1
TRAPPC4-201ENST00000359005 OR10J6PQ8NGY7 276 aa8.21□□□□□ -1.1
TRAPPC4-201ENST00000359005 TSKUQ8WUA8 353 aa8.21□□□□□ -1.1
TRAPPC4-201ENST00000359005 BORCS7Q96B45 105 aa8.21□□□□□ -1.1
TRAPPC4-201ENST00000359005 LINC00479Q96M42 142 aa8.21□□□□□ -1.1
TRAPPC4-201ENST00000359005 C17orf77Q96MU5 243 aa8.21□□□□□ -1.1
TRAPPC4-201ENST00000359005 RPP21Q9H633 154 aaKnown RBP8.21□□□□□ -1.1
TRAPPC4-201ENST00000359005 SMAD5-AS1Q9Y6J3 95 aa8.21□□□□□ -1.1
TRAPPC4-201ENST00000359005 V9GYV3 84 aa8.21□□□□□ -1.1
TRAPPC4-201ENST00000359005 A0A1B0GUS0 222 aa8.2□□□□□ -1.1
TRAPPC4-201ENST00000359005 TRBV12-3P01733 135 aa8.2□□□□□ -1.1
TRAPPC4-201ENST00000359005 SNRPD3P62318 126 aaKnown RBP8.2□□□□□ -1.1
TRAPPC4-201ENST00000359005 OR5I1Q13606 314 aa8.2□□□□□ -1.1
TRAPPC4-201ENST00000359005 SMUG1Q53HV7 270 aa8.2□□□□□ -1.1
TRAPPC4-201ENST00000359005 UNQ9165/PRO28630Q6UXU0 137 aa8.2□□□□□ -1.1
TRAPPC4-201ENST00000359005 COX8CQ7Z4L0 72 aa8.2□□□□□ -1.1
TRAPPC4-201ENST00000359005 ATP5L2Q7Z4Y8 100 aa8.2□□□□□ -1.1
TRAPPC4-201ENST00000359005 NUDT10Q8NFP7 164 aa8.2□□□□□ -1.1
TRAPPC4-201ENST00000359005 NUDT11Q96G61 164 aa8.2□□□□□ -1.1
TRAPPC4-201ENST00000359005 ASCL2Q99929 193 aa8.2□□□□□ -1.1
TRAPPC4-201ENST00000359005 RNASE7Q9H1E1 156 aaKnown RBP8.2□□□□□ -1.1
TRAPPC4-201ENST00000359005 PPP1R14DQ9NXH3 145 aa8.2□□□□□ -1.1
TRAPPC4-201ENST00000359005 IGHV3-66A0A0C4DH42 116 aa8.19□□□□□ -1.1
TRAPPC4-201ENST00000359005 A0A1B0GW15 77 aa8.19□□□□□ -1.1
TRAPPC4-201ENST00000359005 SMIM27A0A1W2PRY6 76 aa8.19□□□□□ -1.1
TRAPPC4-201ENST00000359005 IZUMO1RA6ND01 250 aa8.19□□□□□ -1.1
TRAPPC4-201ENST00000359005 M0R3E3 92 aa8.19□□□□□ -1.1
TRAPPC4-201ENST00000359005 CXCL1P09341 107 aa8.19□□□□□ -1.1
TRAPPC4-201ENST00000359005 HOXD3P31249 432 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC4-201ENST00000359005 FAM162BQ5T6X4 162 aa8.19□□□□□ -1.1
TRAPPC4-201ENST00000359005 LCNL1Q6ZST4 164 aa8.19□□□□□ -1.1
TRAPPC4-201ENST00000359005 TCF24Q7RTU0 167 aa8.19□□□□□ -1.1
TRAPPC4-201ENST00000359005 NHLRC2Q8NBF2 726 aa8.19□□□□□ -1.1
TRAPPC4-201ENST00000359005 ZNF738Q8NE65 137 aa8.19□□□□□ -1.1
TRAPPC4-201ENST00000359005 OR1N2Q8NGR9 330 aa8.19□□□□□ -1.1
TRAPPC4-201ENST00000359005 LINC00477Q96M19 166 aa8.19□□□□□ -1.1
TRAPPC4-201ENST00000359005 TSSC4Q9Y5U2 329 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC4-201ENST00000359005 IGHV3OR16-13A0A075B7E8 117 aa8.18□□□□□ -1.1
TRAPPC4-201ENST00000359005 IGHV3-49A0A0A0MS15 119 aa8.18□□□□□ -1.1
TRAPPC4-201ENST00000359005 IGHV3-74A0A0B4J1X5 117 aa8.18□□□□□ -1.1
TRAPPC4-201ENST00000359005 TRBV7-9A0A0J9YWB2 115 aa8.18□□□□□ -1.1
TRAPPC4-201ENST00000359005 IGLV2-11P01706 119 aa8.18□□□□□ -1.1
TRAPPC4-201ENST00000359005 APOHP02749 345 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC4-201ENST00000359005 ZNF138P52744 262 aa8.18□□□□□ -1.1
TRAPPC4-201ENST00000359005 TM4SF20Q53R12 229 aa8.18□□□□□ -1.1
TRAPPC4-201ENST00000359005 HIST2H2BDQ6DRA6 164 aa8.18□□□□□ -1.1
TRAPPC4-201ENST00000359005 C9orf47Q6ZRZ4 202 aa8.18□□□□□ -1.1
TRAPPC4-201ENST00000359005 KLHL30-AS1Q8NEE0 82 aa8.18□□□□□ -1.1
TRAPPC4-201ENST00000359005 PRR25Q96S07 402 aa8.18□□□□□ -1.1
TRAPPC4-201ENST00000359005 GNB1LQ9BYB4 327 aa8.18□□□□□ -1.1
TRAPPC4-201ENST00000359005 TRAPPC1Q9Y5R8 145 aa8.18□□□□□ -1.1
TRAPPC4-201ENST00000359005 IGHV4OR15-8A0A075B7B6 117 aa8.17□□□□□ -1.1
TRAPPC4-201ENST00000359005 A0A087WW49 117 aa8.17□□□□□ -1.1
TRAPPC4-201ENST00000359005 TRAV8-1A0A0A6YYK1 113 aa8.17□□□□□ -1.1
TRAPPC4-201ENST00000359005 TRAV2A0A0B4J234 112 aa8.17□□□□□ -1.1
TRAPPC4-201ENST00000359005 C19orf71A6NCJ1 209 aa8.17□□□□□ -1.1
TRAPPC4-201ENST00000359005 FABP5P3A8MUU1 101 aa8.17□□□□□ -1.1
TRAPPC4-201ENST00000359005 WIPF1O43516 503 aa8.17□□□□□ -1.1
TRAPPC4-201ENST00000359005 HLA-DQA1P01909 254 aa8.17□□□□□ -1.1
TRAPPC4-201ENST00000359005 SYNJ2BPP57105 145 aa8.17□□□□□ -1.1
TRAPPC4-201ENST00000359005 KLF5Q13887 457 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC4-201ENST00000359005 PRR31Q5SQ13 230 aa8.17□□□□□ -1.1
TRAPPC4-201ENST00000359005 SHISA2Q6UWI4 295 aa8.17□□□□□ -1.1
TRAPPC4-201ENST00000359005 RBPMS2Q6ZRY4 209 aaKnown RBP8.17□□□□□ -1.1
TRAPPC4-201ENST00000359005 OR11H1Q8NG94 326 aa8.17□□□□□ -1.1
TRAPPC4-201ENST00000359005 TMEM189A5PLL7 270 aa8.16□□□□□ -1.1
TRAPPC4-201ENST00000359005 NPIPB6E9PJ23 425 aa8.16□□□□□ -1.1
TRAPPC4-201ENST00000359005 TRGC2P03986 189 aa8.16□□□□□ -1.1
TRAPPC4-201ENST00000359005 CBLN1P23435 193 aa8.16□□□□□ -1.1
TRAPPC4-201ENST00000359005 HIST1H1AQ02539 215 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC4-201ENST00000359005 OR2D3Q8NGH3 330 aa8.16□□□□□ -1.1
TRAPPC4-201ENST00000359005 LINC01006Q8NI28 216 aa8.16□□□□□ -1.1
TRAPPC4-201ENST00000359005 WIPF2Q8TF74 440 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC4-201ENST00000359005 FRZBQ92765 325 aa8.16□□□□□ -1.1
TRAPPC4-201ENST00000359005 SGK494Q96LW2 274 aa8.16□□□□□ -1.1
TRAPPC4-201ENST00000359005 NOTCH3Q9UM47 2321 aa8.15□□□□□ -1.1
TRAPPC4-201ENST00000359005 IGKV2-40A0A087WW87 121 aaPredicted RBP8.15□□□□□ -1.1
TRAPPC4-201ENST00000359005 TMEM213A2RRL7 107 aa8.15□□□□□ -1.1
TRAPPC4-201ENST00000359005 IGKV2D-40P01614 121 aaPredicted RBP8.15□□□□□ -1.1
TRAPPC4-201ENST00000359005 CMC4P56277 68 aaPredicted RBP8.15□□□□□ -1.1
TRAPPC4-201ENST00000359005 RIGQ13278 110 aa8.15□□□□□ -1.1
TRAPPC4-201ENST00000359005 ACTL10Q5JWF8 245 aa8.15□□□□□ -1.1
TRAPPC4-201ENST00000359005 C10orf99Q6UWK7 81 aa8.15□□□□□ -1.1
TRAPPC4-201ENST00000359005 OR9G4Q8NGQ1 327 aa8.15□□□□□ -1.1
TRAPPC4-201ENST00000359005 DYNLRB2Q8TF09 96 aa8.15□□□□□ -1.1
TRAPPC4-201ENST00000359005 ZC2HC1AQ96GY0 325 aa8.15□□□□□ -1.1
TRAPPC4-201ENST00000359005 RNF114Q9Y508 228 aa8.15□□□□□ -1.1
TRAPPC4-201ENST00000359005 TGP01266 2768 aa8.14□□□□□ -1.11
TRAPPC4-201ENST00000359005 TRAV8-2A0A0B4J237 113 aa8.14□□□□□ -1.11
TRAPPC4-201ENST00000359005 TRAV25A0A0B4J276 109 aa8.14□□□□□ -1.11
TRAPPC4-201ENST00000359005 C2orf70A6NJV1 201 aa8.14□□□□□ -1.11
TRAPPC4-201ENST00000359005 HIGD1CA8MV81 97 aa8.14□□□□□ -1.11
TRAPPC4-201ENST00000359005 DUSP14O95147 198 aaKnown RBP8.14□□□□□ -1.11
TRAPPC4-201ENST00000359005 FOXA3P55318 350 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC4-201ENST00000359005 PROK1P58294 105 aa8.14□□□□□ -1.11
TRAPPC4-201ENST00000359005 RAB4BP61018 213 aa8.14□□□□□ -1.11
TRAPPC4-201ENST00000359005 EBLN2Q6P2I7 272 aa8.14□□□□□ -1.11
TRAPPC4-201ENST00000359005 ZFP82Q8N141 532 aa8.14□□□□□ -1.11
TRAPPC4-201ENST00000359005 RNF182Q8N6D2 247 aa8.14□□□□□ -1.11
TRAPPC4-201ENST00000359005 CITED1Q99966 193 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms