RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 KIR2DL5BA0A0G2JN68 375 aa11.2□□□□□ -0.62
TPM1-206ENST00000358278 KIR2DL5BA0A0G2JPC4 375 aa11.2□□□□□ -0.62
TPM1-206ENST00000358278 CA1P00915 261 aaPredicted RBP11.2□□□□□ -0.62
TPM1-206ENST00000358278 FXYD7P58549 80 aa11.2□□□□□ -0.62
TPM1-206ENST00000358278 LINC00322Q6ZN03 302 aaPredicted RBP11.2□□□□□ -0.62
TPM1-206ENST00000358278 KIR2DL5AQ8N109 375 aa11.2□□□□□ -0.62
TPM1-206ENST00000358278 KIR2DL5BQ8NHK3 375 aa11.2□□□□□ -0.62
TPM1-206ENST00000358278 LINC00477Q96M19 166 aa11.2□□□□□ -0.62
TPM1-206ENST00000358278 SLC35B3Q9H1N7 401 aa11.2□□□□□ -0.62
TPM1-206ENST00000358278 VAX2Q9UIW0 290 aa11.2□□□□□ -0.62
TPM1-206ENST00000358278 A8MTW9 85 aa11.19□□□□□ -0.62
TPM1-206ENST00000358278 TOR2AQ5JU69 321 aa11.19□□□□□ -0.62
TPM1-206ENST00000358278 AMTNQ6UX39 209 aa11.19□□□□□ -0.62
TPM1-206ENST00000358278 Q8TAT8 98 aa11.19□□□□□ -0.62
TPM1-206ENST00000358278 AGPAT4-IT1Q9H0P7 198 aa11.19□□□□□ -0.62
TPM1-206ENST00000358278 COL7A1Q02388 2944 aa11.19□□□□□ -0.62
TPM1-206ENST00000358278 TRAV8-1A0A0A6YYK1 113 aa11.18□□□□□ -0.62
TPM1-206ENST00000358278 LOC102723971A0A1B0GUV8 181 aa11.18□□□□□ -0.62
TPM1-206ENST00000358278 SCO2A0A1W2PP80 73 aa11.18□□□□□ -0.62
TPM1-206ENST00000358278 RBFOX3A6NFN3 312 aa11.18□□□□□ -0.62
TPM1-206ENST00000358278 M0R2Z0 102 aa11.18□□□□□ -0.62
TPM1-206ENST00000358278 SPINK13Q1W4C9 94 aa11.18□□□□□ -0.62
TPM1-206ENST00000358278 SGK494Q96LW2 274 aa11.18□□□□□ -0.62
TPM1-206ENST00000358278 RARRES2Q99969 163 aa11.18□□□□□ -0.62
TPM1-206ENST00000358278 EIF5A2Q9GZV4 153 aaKnown RBP11.18□□□□□ -0.62
TPM1-206ENST00000358278 PDE6DO43924 150 aa11.18□□□□□ -0.62
TPM1-206ENST00000358278 CT45A10P0DMU9 189 aa11.18□□□□□ -0.62
TPM1-206ENST00000358278 AKR1C3P42330 323 aa11.18□□□□□ -0.62
TPM1-206ENST00000358278 ZNF138P52744 262 aa11.18□□□□□ -0.62
TPM1-206ENST00000358278 TMEM75Q8N9X5 138 aa11.18□□□□□ -0.62
TPM1-206ENST00000358278 FAM210AQ96ND0 272 aa11.18□□□□□ -0.62
TPM1-206ENST00000358278 ODF3Q96PU9 254 aa11.18□□□□□ -0.62
TPM1-206ENST00000358278 C1QTNF4Q9BXJ3 329 aa11.18□□□□□ -0.62
TPM1-206ENST00000358278 ZNF492Q9P255 531 aa11.18□□□□□ -0.62
TPM1-206ENST00000358278 XCL2Q9UBD3 114 aa11.18□□□□□ -0.62
TPM1-206ENST00000358278 TRAV34A0A0B4J273 112 aa11.17□□□□□ -0.62
TPM1-206ENST00000358278 UBE2CO00762 179 aa11.17□□□□□ -0.62
TPM1-206ENST00000358278 TSPOP30536 169 aa11.17□□□□□ -0.62
TPM1-206ENST00000358278 LEPP41159 167 aa11.17□□□□□ -0.62
TPM1-206ENST00000358278 CDKN1BP46527 198 aa11.17□□□□□ -0.62
TPM1-206ENST00000358278 UBE2G1P62253 170 aa11.17□□□□□ -0.62
TPM1-206ENST00000358278 CLLU1Q5K131 121 aa11.17□□□□□ -0.62
TPM1-206ENST00000358278 FBLL1A6NHQ2 334 aaKnown RBP11.16□□□□□ -0.62
TPM1-206ENST00000358278 J3KRW8 73 aa11.16□□□□□ -0.62
TPM1-206ENST00000358278 AMBPP02760 352 aa11.16□□□□□ -0.62
TPM1-206ENST00000358278 FLI1Q01543 452 aaPredicted RBP11.16□□□□□ -0.62
TPM1-206ENST00000358278 DEFB135Q30KP9 77 aa11.16□□□□□ -0.62
TPM1-206ENST00000358278 ZNF506Q5JVG8 444 aa11.16□□□□□ -0.62
TPM1-206ENST00000358278 SBSPONQ8IVN8 264 aa11.16□□□□□ -0.62
TPM1-206ENST00000358278 LINC00479Q96M42 142 aa11.16□□□□□ -0.62
TPM1-206ENST00000358278 ASCL2Q99929 193 aa11.16□□□□□ -0.62
TPM1-206ENST00000358278 B9D2Q9BPU9 175 aa11.16□□□□□ -0.62
TPM1-206ENST00000358278 NDFIP1Q9BT67 221 aa11.16□□□□□ -0.62
TPM1-206ENST00000358278 RGS13O14921 159 aa11.15□□□□□ -0.62
TPM1-206ENST00000358278 PRNTQ86SH4 94 aa11.15□□□□□ -0.62
TPM1-206ENST00000358278 FMC1Q96HJ9 113 aa11.15□□□□□ -0.62
TPM1-206ENST00000358278 PSG8Q9UQ74 426 aa11.15□□□□□ -0.62
TPM1-206ENST00000358278 TENM3Q9P273 2699 aa11.15□□□□□ -0.63
TPM1-206ENST00000358278 TRAV12-2A0A075B6T6 113 aa11.15□□□□□ -0.63
TPM1-206ENST00000358278 GIG44P09565 113 aaPredicted RBP11.15□□□□□ -0.63
TPM1-206ENST00000358278 C11orf52Q96A22 123 aa11.15□□□□□ -0.63
TPM1-206ENST00000358278 LENEPQ9Y5L5 61 aa11.15□□□□□ -0.63
TPM1-206ENST00000358278 INSP01308 110 aa11.14□□□□□ -0.63
TPM1-206ENST00000358278 IGLV2-11P01706 119 aa11.14□□□□□ -0.63
TPM1-206ENST00000358278 Q6ZWC4 215 aa11.14□□□□□ -0.63
TPM1-206ENST00000358278 Q86TA4 180 aa11.14□□□□□ -0.63
TPM1-206ENST00000358278 C2CD4CQ8TF44 421 aa11.14□□□□□ -0.63
TPM1-206ENST00000358278 MED9Q9NWA0 146 aa11.14□□□□□ -0.63
TPM1-206ENST00000358278 TRBV7-9A0A0J9YWB2 115 aa11.13□□□□□ -0.63
TPM1-206ENST00000358278 GPX1P07203 203 aa11.13□□□□□ -0.63
TPM1-206ENST00000358278 CRISP2P16562 243 aa11.13□□□□□ -0.63
TPM1-206ENST00000358278 TMEM183BQ1AE95 376 aa11.13□□□□□ -0.63
TPM1-206ENST00000358278 FAM19A4Q96LR4 140 aa11.13□□□□□ -0.63
TPM1-206ENST00000358278 IGF2BP2-AS1Q96M15 143 aa11.13□□□□□ -0.63
TPM1-206ENST00000358278 RCHY1Q96PM5 261 aa11.13□□□□□ -0.63
TPM1-206ENST00000358278 TREM1Q9NP99 234 aa11.13□□□□□ -0.63
TPM1-206ENST00000358278 KLF12Q9Y4X4 402 aa11.13□□□□□ -0.63
TPM1-206ENST00000358278 S100A9P06702 114 aaKnown RBP11.12□□□□□ -0.63
TPM1-206ENST00000358278 RPL35P42766 123 aaKnown RBP11.12□□□□□ -0.63
TPM1-206ENST00000358278 KIR3DS1Q14943 382 aa11.12□□□□□ -0.63
TPM1-206ENST00000358278 DERL1Q9BUN8 251 aa11.12□□□□□ -0.63
TPM1-206ENST00000358278 KLLNB2CW77 178 aa11.12□□□□□ -0.63
TPM1-206ENST00000358278 CRXO43186 299 aaPredicted RBP11.12□□□□□ -0.63
TPM1-206ENST00000358278 CEBPGP53567 150 aa11.12□□□□□ -0.63
TPM1-206ENST00000358278 SAPCD1Q5SSQ6 148 aa11.12□□□□□ -0.63
TPM1-206ENST00000358278 GFI1BQ5VTD9 330 aa11.12□□□□□ -0.63
TPM1-206ENST00000358278 ZFAND2AQ8N6M9 145 aa11.12□□□□□ -0.63
TPM1-206ENST00000358278 SPATA25Q9BR10 227 aa11.12□□□□□ -0.63
TPM1-206ENST00000358278 TMEM208Q9BTX3 173 aa11.12□□□□□ -0.63
TPM1-206ENST00000358278 ZMAT4Q9H898 229 aa11.12□□□□□ -0.63
TPM1-206ENST00000358278 IGHV3OR16-12A0A075B7B8 117 aa11.11□□□□□ -0.63
TPM1-206ENST00000358278 C7orf71A4D174 169 aa11.11□□□□□ -0.63
TPM1-206ENST00000358278 TMEM250H0YL14 139 aa11.11□□□□□ -0.63
TPM1-206ENST00000358278 RNASE4P34096 147 aaKnown RBP11.11□□□□□ -0.63
TPM1-206ENST00000358278 BTN1A1Q13410 526 aa11.11□□□□□ -0.63
TPM1-206ENST00000358278 PEA15Q15121 130 aa11.11□□□□□ -0.63
TPM1-206ENST00000358278 CSNK1G2-AS1Q8NCQ2 148 aa11.11□□□□□ -0.63
TPM1-206ENST00000358278 TVP23CQ96ET8 276 aa11.11□□□□□ -0.63
TPM1-206ENST00000358278 C8orf49Q96NF6 230 aa11.11□□□□□ -0.63
TPM1-206ENST00000358278 TM2D3Q9BRN9 247 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 315.7 ms