RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 ERCC8Q13216 396 aa10.93□□□□□ -0.66
CCNE1-202ENST00000357943 VGLL1Q99990 258 aa10.93□□□□□ -0.66
CCNE1-202ENST00000357943 NKX6-2Q9C056 277 aaPredicted RBP10.93□□□□□ -0.66
CCNE1-202ENST00000357943 EPDR1Q9UM22 224 aa10.93□□□□□ -0.66
CCNE1-202ENST00000357943 FBN3Q75N90 2809 aa10.93□□□□□ -0.66
CCNE1-202ENST00000357943 DUSP14O95147 198 aaKnown RBP10.92□□□□□ -0.66
CCNE1-202ENST00000357943 TCRAP04437 139 aa10.92□□□□□ -0.66
CCNE1-202ENST00000357943 GOLT1AQ6ZVE7 132 aa10.92□□□□□ -0.66
CCNE1-202ENST00000357943 A8MTW9 85 aa10.91□□□□□ -0.66
CCNE1-202ENST00000357943 C11orf94C9JXX5 98 aa10.91□□□□□ -0.66
CCNE1-202ENST00000357943 NPIPB6E9PJ23 425 aa10.91□□□□□ -0.66
CCNE1-202ENST00000357943 SCO1O75880 301 aa10.91□□□□□ -0.66
CCNE1-202ENST00000357943 ADCYAP1P18509 176 aa10.91□□□□□ -0.66
CCNE1-202ENST00000357943 BTN1A1Q13410 526 aa10.91□□□□□ -0.66
CCNE1-202ENST00000357943 C10orf91Q5T1B1 145 aa10.91□□□□□ -0.66
CCNE1-202ENST00000357943 AMTNQ6UX39 209 aa10.91□□□□□ -0.66
CCNE1-202ENST00000357943 ARL6IP6Q8N6S5 226 aa10.91□□□□□ -0.66
CCNE1-202ENST00000357943 AGPAT4-IT1Q9H0P7 198 aa10.91□□□□□ -0.66
CCNE1-202ENST00000357943 SLC35B3Q9H1N7 401 aa10.91□□□□□ -0.66
CCNE1-202ENST00000357943 VAX2Q9UIW0 290 aa10.91□□□□□ -0.66
CCNE1-202ENST00000357943 TRAV8-1A0A0A6YYK1 113 aa10.91□□□□□ -0.66
CCNE1-202ENST00000357943 SRP19P09132 144 aaKnown RBP10.91□□□□□ -0.66
CCNE1-202ENST00000357943 SFTA3P0C7M3 94 aa10.91□□□□□ -0.66
CCNE1-202ENST00000357943 TAGLN2P37802 199 aaKnown RBP10.91□□□□□ -0.66
CCNE1-202ENST00000357943 FXYD7P58549 80 aa10.91□□□□□ -0.66
CCNE1-202ENST00000357943 C9orf47Q6ZRZ4 202 aa10.91□□□□□ -0.66
CCNE1-202ENST00000357943 SGK494Q96LW2 274 aa10.91□□□□□ -0.66
CCNE1-202ENST00000357943 LINC00479Q96M42 142 aa10.91□□□□□ -0.66
CCNE1-202ENST00000357943 RBAKDNA6NC62 111 aa10.9□□□□□ -0.66
CCNE1-202ENST00000357943 F8W036 122 aa10.9□□□□□ -0.66
CCNE1-202ENST00000357943 GIG44P09565 113 aaPredicted RBP10.9□□□□□ -0.66
CCNE1-202ENST00000357943 CT45A10P0DMU9 189 aa10.9□□□□□ -0.66
CCNE1-202ENST00000357943 FLI1Q01543 452 aaPredicted RBP10.9□□□□□ -0.66
CCNE1-202ENST00000357943 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.9□□□□□ -0.66
CCNE1-202ENST00000357943 CLUHP3Q96NS8 147 aa10.9□□□□□ -0.66
CCNE1-202ENST00000357943 ASCL2Q99929 193 aa10.9□□□□□ -0.66
CCNE1-202ENST00000357943 ATG101Q9BSB4 218 aa10.9□□□□□ -0.66
CCNE1-202ENST00000357943 SEC11CQ9BY50 192 aa10.9□□□□□ -0.66
CCNE1-202ENST00000357943 CSTL1Q9H114 145 aa10.9□□□□□ -0.66
CCNE1-202ENST00000357943 SCO2A0A1W2PP80 73 aa10.89□□□□□ -0.67
CCNE1-202ENST00000357943 PEX7O00628 323 aa10.89□□□□□ -0.67
CCNE1-202ENST00000357943 MEF2BQ02080 365 aaPredicted RBP10.89□□□□□ -0.67
CCNE1-202ENST00000357943 TMEM78Q5T7P6 136 aa10.89□□□□□ -0.67
CCNE1-202ENST00000357943 SBSPONQ8IVN8 264 aa10.89□□□□□ -0.67
CCNE1-202ENST00000357943 CYB561D1Q8N8Q1 229 aa10.89□□□□□ -0.67
CCNE1-202ENST00000357943 Q8TAT8 98 aa10.89□□□□□ -0.67
CCNE1-202ENST00000357943 HIST1H2BAQ96A08 127 aa10.89□□□□□ -0.67
CCNE1-202ENST00000357943 LINC00477Q96M19 166 aa10.89□□□□□ -0.67
CCNE1-202ENST00000357943 KIR2DL5BA0A0G2JN68 375 aa10.88□□□□□ -0.67
CCNE1-202ENST00000357943 KIR2DL5BA0A0G2JPC4 375 aa10.88□□□□□ -0.67
CCNE1-202ENST00000357943 M0R2Z0 102 aa10.88□□□□□ -0.67
CCNE1-202ENST00000357943 NDUFS6O75380 124 aaKnown RBP10.88□□□□□ -0.67
CCNE1-202ENST00000357943 CA1P00915 261 aaPredicted RBP10.88□□□□□ -0.67
CCNE1-202ENST00000357943 APOC4P55056 127 aa10.88□□□□□ -0.67
CCNE1-202ENST00000357943 NUTF2P61970 127 aaKnown RBP10.88□□□□□ -0.67
CCNE1-202ENST00000357943 SPINK13Q1W4C9 94 aa10.88□□□□□ -0.67
CCNE1-202ENST00000357943 KIR2DL5AQ8N109 375 aa10.88□□□□□ -0.67
CCNE1-202ENST00000357943 CLRN3Q8NCR9 226 aa10.88□□□□□ -0.67
CCNE1-202ENST00000357943 KIR2DL5BQ8NHK3 375 aa10.88□□□□□ -0.67
CCNE1-202ENST00000357943 ZNF492Q9P255 531 aa10.88□□□□□ -0.67
CCNE1-202ENST00000357943 CARHSP1Q9Y2V2 147 aaKnown RBP10.88□□□□□ -0.67
CCNE1-202ENST00000357943 TRAV34A0A0B4J273 112 aa10.87□□□□□ -0.67
CCNE1-202ENST00000357943 SERTM2A0A1B0GWG4 89 aa10.87□□□□□ -0.67
CCNE1-202ENST00000357943 IGLV2-11P01706 119 aa10.87□□□□□ -0.67
CCNE1-202ENST00000357943 MORN3Q6PF18 240 aaPredicted RBP10.87□□□□□ -0.67
CCNE1-202ENST00000357943 TXNDC17Q9BRA2 123 aa10.87□□□□□ -0.67
CCNE1-202ENST00000357943 TCEAL7Q9BRU2 100 aa10.87□□□□□ -0.67
CCNE1-202ENST00000357943 PPP1R14DQ9NXH3 145 aa10.87□□□□□ -0.67
CCNE1-202ENST00000357943 XCL2Q9UBD3 114 aa10.87□□□□□ -0.67
CCNE1-202ENST00000357943 NBEAL2Q6ZNJ1 2754 aa10.87□□□□□ -0.67
CCNE1-202ENST00000357943 K7EQM0 130 aa10.87□□□□□ -0.67
CCNE1-202ENST00000357943 APOC3P02656 99 aa10.87□□□□□ -0.67
CCNE1-202ENST00000357943 ZNF138P52744 262 aa10.87□□□□□ -0.67
CCNE1-202ENST00000357943 KIR3DS1Q14943 382 aa10.87□□□□□ -0.67
CCNE1-202ENST00000357943 FAM19A4Q96LR4 140 aa10.87□□□□□ -0.67
CCNE1-202ENST00000357943 TRAV12-2A0A075B6T6 113 aa10.86□□□□□ -0.67
CCNE1-202ENST00000357943 F6UZH7 168 aa10.86□□□□□ -0.67
CCNE1-202ENST00000357943 J3KRW8 73 aa10.86□□□□□ -0.67
CCNE1-202ENST00000357943 CDKN1BP46527 198 aa10.86□□□□□ -0.67
CCNE1-202ENST00000357943 SVBPQ8N300 66 aa10.86□□□□□ -0.67
CCNE1-202ENST00000357943 TMEM75Q8N9X5 138 aa10.86□□□□□ -0.67
CCNE1-202ENST00000357943 C2CD4CQ8TF44 421 aa10.86□□□□□ -0.67
CCNE1-202ENST00000357943 CRXO43186 299 aaPredicted RBP10.85□□□□□ -0.67
CCNE1-202ENST00000357943 DEFB135Q30KP9 77 aa10.85□□□□□ -0.67
CCNE1-202ENST00000357943 SOHLH1Q5JUK2 328 aa10.85□□□□□ -0.67
CCNE1-202ENST00000357943 C11orf52Q96A22 123 aa10.85□□□□□ -0.67
CCNE1-202ENST00000357943 TVP23CQ96ET8 276 aa10.85□□□□□ -0.67
CCNE1-202ENST00000357943 ODF3Q96PU9 254 aa10.85□□□□□ -0.67
CCNE1-202ENST00000357943 B9D2Q9BPU9 175 aa10.85□□□□□ -0.67
CCNE1-202ENST00000357943 PSG8Q9UQ74 426 aa10.85□□□□□ -0.67
CCNE1-202ENST00000357943 TMEM250H0YL14 139 aa10.84□□□□□ -0.67
CCNE1-202ENST00000357943 UBE2CO00762 179 aa10.84□□□□□ -0.67
CCNE1-202ENST00000357943 PDE6DO43924 150 aa10.84□□□□□ -0.67
CCNE1-202ENST00000357943 AKR1C3P42330 323 aa10.84□□□□□ -0.67
CCNE1-202ENST00000357943 PRNTQ86SH4 94 aa10.84□□□□□ -0.67
CCNE1-202ENST00000357943 CSNK1G2-AS1Q8NCQ2 148 aa10.84□□□□□ -0.67
CCNE1-202ENST00000357943 DERL1Q9BUN8 251 aa10.84□□□□□ -0.67
CCNE1-202ENST00000357943 KLF12Q9Y4X4 402 aa10.84□□□□□ -0.67
CCNE1-202ENST00000357943 CRISP2P16562 243 aa10.84□□□□□ -0.67
CCNE1-202ENST00000357943 CEBPGP53567 150 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms