RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 TMEM200BQ69YZ2 307 aa10.04□□□□□ -0.8
BDNF-202ENST00000356660 C17orf77Q96MU5 243 aa10.04□□□□□ -0.8
BDNF-202ENST00000356660 IGKV2-40A0A087WW87 121 aaPredicted RBP10.04□□□□□ -0.8
BDNF-202ENST00000356660 NDUFA3O95167 84 aa10.04□□□□□ -0.8
BDNF-202ENST00000356660 IGKV2D-40P01614 121 aaPredicted RBP10.04□□□□□ -0.8
BDNF-202ENST00000356660 CNTFRP26992 372 aa10.04□□□□□ -0.8
BDNF-202ENST00000356660 TET2Q6N021 2002 aaPredicted RBP10.04□□□□□ -0.8
BDNF-202ENST00000356660 TIMM23O14925 209 aa10.04□□□□□ -0.8
BDNF-202ENST00000356660 ZNF502Q8TBZ5 544 aa10.04□□□□□ -0.8
BDNF-202ENST00000356660 MBD6Q96DN6 1003 aa10.04□□□□□ -0.8
BDNF-202ENST00000356660 TGFAP01135 160 aa10.03□□□□□ -0.8
BDNF-202ENST00000356660 LYPD2Q6UXB3 125 aa10.03□□□□□ -0.8
BDNF-202ENST00000356660 TNRC6AQ8NDV7 1962 aaKnown RBP10.03□□□□□ -0.8
BDNF-202ENST00000356660 A0A0G2JNJ9 132 aa10.03□□□□□ -0.8
BDNF-202ENST00000356660 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.03□□□□□ -0.8
BDNF-202ENST00000356660 Q1RN00 199 aa10.03□□□□□ -0.8
BDNF-202ENST00000356660 NEU4Q8WWR8 484 aaPredicted RBP10.03□□□□□ -0.8
BDNF-202ENST00000356660 SIGLEC8Q9NYZ4 499 aa10.03□□□□□ -0.8
BDNF-202ENST00000356660 Q9UFV3 132 aa10.03□□□□□ -0.8
BDNF-202ENST00000356660 COL5A1P20908 1838 aaPredicted RBP10.03□□□□□ -0.8
BDNF-202ENST00000356660 FAM106AQ4KMX7 169 aa10.03□□□□□ -0.8
BDNF-202ENST00000356660 FAM120AOSQ5T036 256 aa10.03□□□□□ -0.8
BDNF-202ENST00000356660 ZC2HC1BQ5TFG8 222 aa10.03□□□□□ -0.8
BDNF-202ENST00000356660 METTL26Q96S19 204 aa10.03□□□□□ -0.8
BDNF-202ENST00000356660 DKK2Q9UBU2 259 aa10.03□□□□□ -0.8
BDNF-202ENST00000356660 LRRK2Q5S007 2527 aa10.02□□□□□ -0.8
BDNF-202ENST00000356660 ZNF418Q8TF45 676 aaPredicted RBP10.02□□□□□ -0.8
BDNF-202ENST00000356660 C8orf49Q96NF6 230 aa10.02□□□□□ -0.8
BDNF-202ENST00000356660 C21orf62Q9NYP8 219 aa10.02□□□□□ -0.8
BDNF-202ENST00000356660 APOMO95445 188 aa10.02□□□□□ -0.81
BDNF-202ENST00000356660 MSMPQ1L6U9 139 aa10.02□□□□□ -0.81
BDNF-202ENST00000356660 TTC9CQ8N5M4 171 aa10.02□□□□□ -0.81
BDNF-202ENST00000356660 TRGV9Q99603 122 aa10.02□□□□□ -0.81
BDNF-202ENST00000356660 POU2AF1Q16633 256 aa10.02□□□□□ -0.81
BDNF-202ENST00000356660 DGAT2L7PQ6IED9 249 aa10.02□□□□□ -0.81
BDNF-202ENST00000356660 NPFFR1Q9GZQ6 430 aa10.02□□□□□ -0.81
BDNF-202ENST00000356660 NACAE9PAV3 2078 aa10.01□□□□□ -0.81
BDNF-202ENST00000356660 A0A1W2PPM0 123 aa10.01□□□□□ -0.81
BDNF-202ENST00000356660 LOXL1Q08397 574 aaPredicted RBP10.01□□□□□ -0.81
BDNF-202ENST00000356660 CT83Q5H943 113 aa10.01□□□□□ -0.81
BDNF-202ENST00000356660 LINC01545Q5VT33 79 aa10.01□□□□□ -0.81
BDNF-202ENST00000356660 RNF125Q96EQ8 232 aa10.01□□□□□ -0.81
BDNF-202ENST00000356660 ZNF492Q9P255 531 aa10.01□□□□□ -0.81
BDNF-202ENST00000356660 WT1P19544 449 aaPredicted RBP10.01□□□□□ -0.81
BDNF-202ENST00000356660 KLRD1Q13241 179 aa10.01□□□□□ -0.81
BDNF-202ENST00000356660 AMTNQ6UX39 209 aa10.01□□□□□ -0.81
BDNF-202ENST00000356660 ABCA12Q86UK0 2595 aa10.01□□□□□ -0.81
BDNF-202ENST00000356660 Q6AWC8 147 aa10.01□□□□□ -0.81
BDNF-202ENST00000356660 CLEC19AQ6UXS0 136 aa10.01□□□□□ -0.81
BDNF-202ENST00000356660 GFRA4Q9GZZ7 299 aa10.01□□□□□ -0.81
BDNF-202ENST00000356660 IGHV3OR16-12A0A075B7B8 117 aa10□□□□□ -0.81
BDNF-202ENST00000356660 A0A1B0GXF2 115 aa10□□□□□ -0.81
BDNF-202ENST00000356660 GAGE12JA6NER3 117 aa10□□□□□ -0.81
BDNF-202ENST00000356660 HAX1O00165 279 aa10□□□□□ -0.81
BDNF-202ENST00000356660 GAGE7O76087 117 aa10□□□□□ -0.81
BDNF-202ENST00000356660 GAGE12FP0CL80 117 aa10□□□□□ -0.81
BDNF-202ENST00000356660 GAGE12GP0CL81 117 aa10□□□□□ -0.81
BDNF-202ENST00000356660 GAGE12IP0CL82 117 aa10□□□□□ -0.81
BDNF-202ENST00000356660 GAGE4Q13068 117 aa10□□□□□ -0.81
BDNF-202ENST00000356660 ZNF672Q499Z4 452 aaPredicted RBP10□□□□□ -0.81
BDNF-202ENST00000356660 LTAP01374 205 aa10□□□□□ -0.81
BDNF-202ENST00000356660 DEFB104AQ8WTQ1 72 aa10□□□□□ -0.81
BDNF-202ENST00000356660 ADIPOQQ15848 244 aa10□□□□□ -0.81
BDNF-202ENST00000356660 URB1-AS1Q96HZ7 61 aa10□□□□□ -0.81
BDNF-202ENST00000356660 IGHG3P01860 377 aa9.99□□□□□ -0.81
BDNF-202ENST00000356660 TRGV3P03979 118 aa9.99□□□□□ -0.81
BDNF-202ENST00000356660 TMEM30BQ3MIR4 351 aa9.99□□□□□ -0.81
BDNF-202ENST00000356660 Q6ZS92 163 aa9.99□□□□□ -0.81
BDNF-202ENST00000356660 RNF183Q96D59 192 aa9.99□□□□□ -0.81
BDNF-202ENST00000356660 CHAC1Q9BUX1 264 aa9.99□□□□□ -0.81
BDNF-202ENST00000356660 H7C2G1 150 aa9.99□□□□□ -0.81
BDNF-202ENST00000356660 IGKCP01834 107 aa9.99□□□□□ -0.81
BDNF-202ENST00000356660 FAM74A4Q5TZK3 123 aa9.99□□□□□ -0.81
BDNF-202ENST00000356660 C10orf126Q8N4M7 172 aa9.99□□□□□ -0.81
BDNF-202ENST00000356660 CEP192Q8TEP8 1941 aa9.99□□□□□ -0.81
BDNF-202ENST00000356660 DSPP15924 2871 aaKnown RBP9.99□□□□□ -0.81
BDNF-202ENST00000356660 TRBV20-1A0A075B6N2 111 aa9.99□□□□□ -0.81
BDNF-202ENST00000356660 OR11H12B2RN74 326 aa9.99□□□□□ -0.81
BDNF-202ENST00000356660 M0R381 172 aa9.99□□□□□ -0.81
BDNF-202ENST00000356660 SH2D1AO60880 128 aa9.99□□□□□ -0.81
BDNF-202ENST00000356660 OR11H1Q8NG94 326 aa9.99□□□□□ -0.81
BDNF-202ENST00000356660 OR11H2Q8NH07 326 aa9.99□□□□□ -0.81
BDNF-202ENST00000356660 RITA1Q96K30 269 aa9.99□□□□□ -0.81
BDNF-202ENST00000356660 PSMB11A5LHX3 300 aa9.98□□□□□ -0.81
BDNF-202ENST00000356660 TMEM178BH3BS89 294 aa9.98□□□□□ -0.81
BDNF-202ENST00000356660 NPYP01303 97 aa9.98□□□□□ -0.81
BDNF-202ENST00000356660 MBD3L4A6NDZ8 208 aaPredicted RBP9.98□□□□□ -0.81
BDNF-202ENST00000356660 MBD3L3A6NE82 208 aaPredicted RBP9.98□□□□□ -0.81
BDNF-202ENST00000356660 MBD3L5A6NJ08 208 aaPredicted RBP9.98□□□□□ -0.81
BDNF-202ENST00000356660 MRPL51Q4U2R6 128 aaKnown RBP9.98□□□□□ -0.81
BDNF-202ENST00000356660 OR10J6PQ8NGY7 276 aa9.98□□□□□ -0.81
BDNF-202ENST00000356660 MBD3L2Q8NHZ7 208 aaPredicted RBP9.98□□□□□ -0.81
BDNF-202ENST00000356660 GLMPQ8WWB7 406 aa9.98□□□□□ -0.81
BDNF-202ENST00000356660 ARPC1AQ92747 370 aa9.98□□□□□ -0.81
BDNF-202ENST00000356660 POLQO75417 2590 aa9.98□□□□□ -0.81
BDNF-202ENST00000356660 H3BMG7 143 aa9.98□□□□□ -0.81
BDNF-202ENST00000356660 DPM2O94777 84 aa9.98□□□□□ -0.81
BDNF-202ENST00000356660 GAGE13Q4V321 117 aa9.98□□□□□ -0.81
BDNF-202ENST00000356660 FAM104BQ5XKR9 115 aa9.98□□□□□ -0.81
BDNF-202ENST00000356660 TMEM75Q8N9X5 138 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms