RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 PPP1R17O96001 155 aa9.79□□□□□ -0.84
COLCA1-201ENST00000355430 ZNF479Q96JC4 524 aa9.79□□□□□ -0.84
COLCA1-201ENST00000355430 ZMAT4Q9H898 229 aa9.79□□□□□ -0.84
COLCA1-201ENST00000355430 IGKV3OR2-268A0A0C4DH90 116 aa9.79□□□□□ -0.84
COLCA1-201ENST00000355430 CRXO43186 299 aaPredicted RBP9.79□□□□□ -0.84
COLCA1-201ENST00000355430 LRRC75A-AS1Q8N1F1 130 aa9.79□□□□□ -0.84
COLCA1-201ENST00000355430 WIPF2Q8TF74 440 aaPredicted RBP9.79□□□□□ -0.84
COLCA1-201ENST00000355430 ZC2HC1AQ96GY0 325 aa9.79□□□□□ -0.84
COLCA1-201ENST00000355430 IGF2BP2-AS1Q96M15 143 aa9.79□□□□□ -0.84
COLCA1-201ENST00000355430 EML6Q6ZMW3 1958 aa9.79□□□□□ -0.84
COLCA1-201ENST00000355430 KAAG1Q9UBP8 84 aa9.79□□□□□ -0.84
COLCA1-201ENST00000355430 IGHV4-61A0A0C4DH41 118 aa9.78□□□□□ -0.84
COLCA1-201ENST00000355430 P0C879 139 aa9.78□□□□□ -0.84
COLCA1-201ENST00000355430 SYNJ2BPP57105 145 aa9.78□□□□□ -0.84
COLCA1-201ENST00000355430 KLF5Q13887 457 aaPredicted RBP9.78□□□□□ -0.84
COLCA1-201ENST00000355430 DAZ1Q9NQZ3 744 aaKnown RBP9.78□□□□□ -0.84
COLCA1-201ENST00000355430 SMPXQ9UHP9 88 aa9.78□□□□□ -0.84
COLCA1-201ENST00000355430 ZNF256Q9Y2P7 627 aaPredicted RBP9.78□□□□□ -0.84
COLCA1-201ENST00000355430 LTAP01374 205 aa9.78□□□□□ -0.84
COLCA1-201ENST00000355430 CD7P09564 240 aa9.78□□□□□ -0.84
COLCA1-201ENST00000355430 ZNF562Q6V9R5 426 aa9.78□□□□□ -0.84
COLCA1-201ENST00000355430 CHD3Q12873 2000 aaKnown RBP9.78□□□□□ -0.84
COLCA1-201ENST00000355430 TRAV21A0A0B4J279 112 aa9.78□□□□□ -0.84
COLCA1-201ENST00000355430 NDPQ00604 133 aa9.78□□□□□ -0.84
COLCA1-201ENST00000355430 ORMDL2Q53FV1 153 aa9.78□□□□□ -0.84
COLCA1-201ENST00000355430 LINC00311Q8N616 119 aa9.78□□□□□ -0.84
COLCA1-201ENST00000355430 CST9LQ9H4G1 147 aa9.78□□□□□ -0.84
COLCA1-201ENST00000355430 LHBP01229 141 aa9.77□□□□□ -0.84
COLCA1-201ENST00000355430 FAM104BQ5XKR9 115 aa9.77□□□□□ -0.84
COLCA1-201ENST00000355430 DEFB104AQ8WTQ1 72 aa9.77□□□□□ -0.84
COLCA1-201ENST00000355430 COX6CP09669 75 aa9.77□□□□□ -0.85
COLCA1-201ENST00000355430 FAM120AOSQ5T036 256 aa9.77□□□□□ -0.85
COLCA1-201ENST00000355430 NRGNQ92686 78 aa9.77□□□□□ -0.85
COLCA1-201ENST00000355430 VGLL1Q99990 258 aa9.77□□□□□ -0.85
COLCA1-201ENST00000355430 ZNF815PA8K554 130 aa9.77□□□□□ -0.85
COLCA1-201ENST00000355430 ELANEP08246 267 aa9.77□□□□□ -0.85
COLCA1-201ENST00000355430 BRWD1-AS2P59051 145 aa9.77□□□□□ -0.85
COLCA1-201ENST00000355430 DEFB112Q30KQ8 113 aa9.77□□□□□ -0.85
COLCA1-201ENST00000355430 WFDC12Q8WWY7 111 aa9.77□□□□□ -0.85
COLCA1-201ENST00000355430 TSSC4Q9Y5U2 329 aaPredicted RBP9.77□□□□□ -0.85
COLCA1-201ENST00000355430 PIEZO1Q92508 2521 aa9.77□□□□□ -0.85
COLCA1-201ENST00000355430 PKDREJQ9NTG1 2253 aa9.77□□□□□ -0.85
COLCA1-201ENST00000355430 TMEM14CQ9P0S9 112 aa9.77□□□□□ -0.85
COLCA1-201ENST00000355430 LRP4O75096 1905 aa9.76□□□□□ -0.85
COLCA1-201ENST00000355430 H3BRN7 92 aa9.76□□□□□ -0.85
COLCA1-201ENST00000355430 ATP6V0E1O15342 81 aa9.76□□□□□ -0.85
COLCA1-201ENST00000355430 PDE6HQ13956 83 aa9.76□□□□□ -0.85
COLCA1-201ENST00000355430 OCIAD2Q56VL3 154 aa9.76□□□□□ -0.85
COLCA1-201ENST00000355430 PRSS57Q6UWY2 283 aa9.76□□□□□ -0.85
COLCA1-201ENST00000355430 ZGRF1Q86YA3 2104 aa9.76□□□□□ -0.85
COLCA1-201ENST00000355430 PRSS46E5RG02 174 aa9.76□□□□□ -0.85
COLCA1-201ENST00000355430 RNF182Q8N6D2 247 aa9.76□□□□□ -0.85
COLCA1-201ENST00000355430 C17orf77Q96MU5 243 aa9.76□□□□□ -0.85
COLCA1-201ENST00000355430 TNFRSF6BO95407 300 aa9.76□□□□□ -0.85
COLCA1-201ENST00000355430 CRPP02741 224 aa9.76□□□□□ -0.85
COLCA1-201ENST00000355430 MRPL51Q4U2R6 128 aaKnown RBP9.76□□□□□ -0.85
COLCA1-201ENST00000355430 ZC2HC1BQ5TFG8 222 aa9.76□□□□□ -0.85
COLCA1-201ENST00000355430 IGLC1P0CG04 106 aa9.76□□□□□ -0.85
COLCA1-201ENST00000355430 APOC4P55056 127 aa9.76□□□□□ -0.85
COLCA1-201ENST00000355430 BVES-AS1Q5T3Y7 98 aa9.76□□□□□ -0.85
COLCA1-201ENST00000355430 CHAC1Q9BUX1 264 aa9.76□□□□□ -0.85
COLCA1-201ENST00000355430 IGLC7A0M8Q6 106 aa9.75□□□□□ -0.85
COLCA1-201ENST00000355430 COX8AP10176 69 aa9.75□□□□□ -0.85
COLCA1-201ENST00000355430 CD300EQ496F6 205 aaPredicted RBP9.75□□□□□ -0.85
COLCA1-201ENST00000355430 PATE2Q6UY27 113 aa9.75□□□□□ -0.85
COLCA1-201ENST00000355430 C9orf139Q6ZV77 190 aa9.75□□□□□ -0.85
COLCA1-201ENST00000355430 SIGLEC8Q9NYZ4 499 aa9.75□□□□□ -0.85
COLCA1-201ENST00000355430 CREBBPQ92793 2442 aa9.75□□□□□ -0.85
COLCA1-201ENST00000355430 A0A1B0GV72 72 aa9.75□□□□□ -0.85
COLCA1-201ENST00000355430 OVOL3O00110 214 aa9.75□□□□□ -0.85
COLCA1-201ENST00000355430 IGKV1OR2-108A0A075B7D4 117 aa9.75□□□□□ -0.85
COLCA1-201ENST00000355430 RHPN1-AS1Q9BWJ2 59 aa9.75□□□□□ -0.85
COLCA1-201ENST00000355430 CUL9Q8IWT3 2517 aa9.75□□□□□ -0.85
COLCA1-201ENST00000355430 NDUFB8O95169 186 aa9.75□□□□□ -0.85
COLCA1-201ENST00000355430 ZNF688P0C7X2 276 aa9.75□□□□□ -0.85
COLCA1-201ENST00000355430 LINC00173Q6ZV60 143 aa9.75□□□□□ -0.85
COLCA1-201ENST00000355430 CYSLTR1Q9Y271 337 aa9.75□□□□□ -0.85
COLCA1-201ENST00000355430 CADP27708 2225 aa9.75□□□□□ -0.85
COLCA1-201ENST00000355430 INSP01308 110 aa9.74□□□□□ -0.85
COLCA1-201ENST00000355430 PRADC1Q9BSG0 188 aa9.74□□□□□ -0.85
COLCA1-201ENST00000355430 ESDP10768 282 aa9.74□□□□□ -0.85
COLCA1-201ENST00000355430 LINC01559Q495D7 138 aa9.74□□□□□ -0.85
COLCA1-201ENST00000355430 RITA1Q96K30 269 aa9.74□□□□□ -0.85
COLCA1-201ENST00000355430 FAM167A-AS1Q96KT0 104 aa9.74□□□□□ -0.85
COLCA1-201ENST00000355430 GAGE13Q4V321 117 aa9.74□□□□□ -0.85
COLCA1-201ENST00000355430 SIGMAR1Q99720 223 aa9.74□□□□□ -0.85
COLCA1-201ENST00000355430 GEMIN7Q9H840 131 aaKnown RBP9.74□□□□□ -0.85
COLCA1-201ENST00000355430 DNAH12Q6ZR08 3092 aa9.73□□□□□ -0.85
COLCA1-201ENST00000355430 CTSZQ9UBR2 303 aa9.73□□□□□ -0.85
COLCA1-201ENST00000355430 CCL25O15444 150 aa9.73□□□□□ -0.85
COLCA1-201ENST00000355430 H3BRM9 83 aa9.73□□□□□ -0.85
COLCA1-201ENST00000355430 WISP2O76076 250 aa9.73□□□□□ -0.85
COLCA1-201ENST00000355430 PLA2G2AP14555 144 aa9.73□□□□□ -0.85
COLCA1-201ENST00000355430 UTRNP46939 3433 aa9.73□□□□□ -0.85
COLCA1-201ENST00000355430 PCNX1Q96RV3 2341 aa9.72□□□□□ -0.85
COLCA1-201ENST00000355430 IGHV4-59P01825 116 aa9.72□□□□□ -0.85
COLCA1-201ENST00000355430 ZNF415Q09FC8 603 aa9.72□□□□□ -0.85
COLCA1-201ENST00000355430 EML5Q05BV3 1969 aa9.72□□□□□ -0.85
COLCA1-201ENST00000355430 C9orf118A6NHY6 69 aa9.72□□□□□ -0.85
COLCA1-201ENST00000355430 NPYP01303 97 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms