RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 LY75O60449 1722 aa10.73□□□□□ -0.69
LMBR1-201ENST00000353442 IGHV4OR15-8A0A075B7B6 117 aa10.73□□□□□ -0.69
LMBR1-201ENST00000353442 A0A087WW49 117 aa10.73□□□□□ -0.69
LMBR1-201ENST00000353442 FGF6P10767 208 aa10.73□□□□□ -0.69
LMBR1-201ENST00000353442 PRSS33Q8NF86 280 aa10.73□□□□□ -0.69
LMBR1-201ENST00000353442 POLEQ07864 2286 aa10.72□□□□□ -0.69
LMBR1-201ENST00000353442 TAF1LQ8IZX4 1826 aa10.72□□□□□ -0.69
LMBR1-201ENST00000353442 SEC16AO15027 2179 aa10.72□□□□□ -0.69
LMBR1-201ENST00000353442 NDUFA4O00483 81 aa10.72□□□□□ -0.69
LMBR1-201ENST00000353442 VPREB3Q9UKI3 123 aa10.72□□□□□ -0.69
LMBR1-201ENST00000353442 SLAQ13239 276 aa10.72□□□□□ -0.69
LMBR1-201ENST00000353442 TPSG1Q9NRR2 321 aa10.72□□□□□ -0.69
LMBR1-201ENST00000353442 MRPL27Q9P0M9 148 aaKnown RBP10.72□□□□□ -0.69
LMBR1-201ENST00000353442 COL11A1P12107 1806 aaPredicted RBP10.72□□□□□ -0.69
LMBR1-201ENST00000353442 CXCL1P09341 107 aa10.72□□□□□ -0.69
LMBR1-201ENST00000353442 AMTNQ6UX39 209 aa10.71□□□□□ -0.69
LMBR1-201ENST00000353442 TMEM141Q96I45 108 aa10.71□□□□□ -0.69
LMBR1-201ENST00000353442 CADP27708 2225 aa10.71□□□□□ -0.69
LMBR1-201ENST00000353442 IGHV7-4-1A0A0J9YVY3 117 aa10.71□□□□□ -0.69
LMBR1-201ENST00000353442 ZNF134P52741 427 aa10.71□□□□□ -0.69
LMBR1-201ENST00000353442 Q6P435 159 aa10.71□□□□□ -0.69
LMBR1-201ENST00000353442 RNF144BQ7Z419 303 aa10.71□□□□□ -0.69
LMBR1-201ENST00000353442 PROP1O75360 226 aa10.71□□□□□ -0.69
LMBR1-201ENST00000353442 DOCK6Q96HP0 2047 aa10.71□□□□□ -0.7
LMBR1-201ENST00000353442 LAMB2P55268 1798 aa10.71□□□□□ -0.7
LMBR1-201ENST00000353442 PKIGQ9Y2B9 76 aa10.71□□□□□ -0.7
LMBR1-201ENST00000353442 CARHSP1Q9Y2V2 147 aaKnown RBP10.71□□□□□ -0.7
LMBR1-201ENST00000353442 SYS1-DBNDD2H3BUS1 97 aa10.7□□□□□ -0.7
LMBR1-201ENST00000353442 COX7B2Q8TF08 81 aa10.7□□□□□ -0.7
LMBR1-201ENST00000353442 IGHV4-38-2P0DP08 117 aa10.7□□□□□ -0.7
LMBR1-201ENST00000353442 HLA-DMBP28068 263 aa10.7□□□□□ -0.7
LMBR1-201ENST00000353442 TMEM258P61165 79 aa10.7□□□□□ -0.7
LMBR1-201ENST00000353442 IGHV4-30-2A0A087WSY4 118 aa10.7□□□□□ -0.7
LMBR1-201ENST00000353442 IGLV3-32A0A0A0MS00 114 aa10.7□□□□□ -0.7
LMBR1-201ENST00000353442 FBLN5Q9UBX5 448 aa10.7□□□□□ -0.7
LMBR1-201ENST00000353442 DIAPH2-AS1Q14236 149 aa10.7□□□□□ -0.7
LMBR1-201ENST00000353442 KLHDC3Q9BQ90 382 aa10.7□□□□□ -0.7
LMBR1-201ENST00000353442 DOCK7Q96N67 2140 aa10.7□□□□□ -0.7
LMBR1-201ENST00000353442 ATP5G1P05496 136 aa10.7□□□□□ -0.7
LMBR1-201ENST00000353442 MRPL23Q16540 153 aaKnown RBP10.7□□□□□ -0.7
LMBR1-201ENST00000353442 Q8NFD4 153 aa10.7□□□□□ -0.7
LMBR1-201ENST00000353442 H0YIZ8 118 aa10.7□□□□□ -0.7
LMBR1-201ENST00000353442 CTSGP08311 255 aa10.7□□□□□ -0.7
LMBR1-201ENST00000353442 HERVK_113P63121 156 aa10.7□□□□□ -0.7
LMBR1-201ENST00000353442 LYPD1Q8N2G4 141 aa10.7□□□□□ -0.7
LMBR1-201ENST00000353442 SVIPQ8NHG7 77 aa10.7□□□□□ -0.7
LMBR1-201ENST00000353442 MRPL53Q96EL3 112 aaKnown RBP10.7□□□□□ -0.7
LMBR1-201ENST00000353442 MARF1Q9Y4F3 1742 aaKnown RBP10.7□□□□□ -0.7
LMBR1-201ENST00000353442 TRAV13-2A0A0B4J235 113 aa10.69□□□□□ -0.7
LMBR1-201ENST00000353442 FLVCR1-AS1Q8TAF5 88 aa10.69□□□□□ -0.7
LMBR1-201ENST00000353442 MRPL36Q9P0J6 103 aaKnown RBP10.69□□□□□ -0.7
LMBR1-201ENST00000353442 M0R2N4 97 aa10.69□□□□□ -0.7
LMBR1-201ENST00000353442 EP300Q09472 2414 aaPredicted RBP10.69□□□□□ -0.7
LMBR1-201ENST00000353442 FUSP35637 526 aaKnown RBP eCLIP10.69□□□□□ -0.7
LMBR1-201ENST00000353442 GTF3C1Q12789 2109 aa10.69□□□□□ -0.7
LMBR1-201ENST00000353442 TNS1Q9HBL0 1735 aaKnown RBP10.69□□□□□ -0.7
LMBR1-201ENST00000353442 IGKV4-1P06312 121 aa10.69□□□□□ -0.7
LMBR1-201ENST00000353442 SMAD5-AS1Q9Y6J3 95 aa10.69□□□□□ -0.7
LMBR1-201ENST00000353442 HEATR1Q9H583 2144 aaKnown RBP10.69□□□□□ -0.7
LMBR1-201ENST00000353442 HIST1H2BKO60814 126 aa10.69□□□□□ -0.7
LMBR1-201ENST00000353442 HIST1H2BJP06899 126 aa10.69□□□□□ -0.7
LMBR1-201ENST00000353442 HIST1H2BOP23527 126 aa10.69□□□□□ -0.7
LMBR1-201ENST00000353442 HIST1H2BBP33778 126 aa10.69□□□□□ -0.7
LMBR1-201ENST00000353442 HIST1H2BDP58876 126 aa10.69□□□□□ -0.7
LMBR1-201ENST00000353442 HIST1H2BCP62807 126 aa10.69□□□□□ -0.7
LMBR1-201ENST00000353442 HIST2H2BEQ16778 126 aa10.69□□□□□ -0.7
LMBR1-201ENST00000353442 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.69□□□□□ -0.7
LMBR1-201ENST00000353442 HIST1H2BHQ93079 126 aa10.69□□□□□ -0.7
LMBR1-201ENST00000353442 HIST1H2BNQ99877 126 aa10.69□□□□□ -0.7
LMBR1-201ENST00000353442 HIST1H2BMQ99879 126 aa10.69□□□□□ -0.7
LMBR1-201ENST00000353442 CARD19Q96LW7 228 aa10.68□□□□□ -0.7
LMBR1-201ENST00000353442 HOXB4P17483 251 aaPredicted RBP10.68□□□□□ -0.7
LMBR1-201ENST00000353442 LYPD6BQ8NI32 183 aa10.68□□□□□ -0.7
LMBR1-201ENST00000353442 SCN4AP35499 1836 aa10.68□□□□□ -0.7
LMBR1-201ENST00000353442 A8MWP6 167 aa10.68□□□□□ -0.7
LMBR1-201ENST00000353442 C3orf79P0CE67 100 aa10.68□□□□□ -0.7
LMBR1-201ENST00000353442 ATP6V0E2Q8NHE4 81 aa10.68□□□□□ -0.7
LMBR1-201ENST00000353442 COL6A6A6NMZ7 2263 aa10.68□□□□□ -0.7
LMBR1-201ENST00000353442 IGKV1-6A0A0C4DH72 117 aa10.68□□□□□ -0.7
LMBR1-201ENST00000353442 C15orf62A8K5M9 175 aa10.67□□□□□ -0.7
LMBR1-201ENST00000353442 CASC2Q6XLA1 102 aa10.67□□□□□ -0.7
LMBR1-201ENST00000353442 FAM104BQ5XKR9 115 aa10.67□□□□□ -0.7
LMBR1-201ENST00000353442 TMEM75Q8N9X5 138 aa10.67□□□□□ -0.7
LMBR1-201ENST00000353442 COL4A5P29400 1685 aa10.67□□□□□ -0.7
LMBR1-201ENST00000353442 ELANEP08246 267 aa10.67□□□□□ -0.7
LMBR1-201ENST00000353442 CRYBA4P53673 196 aa10.67□□□□□ -0.7
LMBR1-201ENST00000353442 WIPF3A6NGB9 483 aa10.67□□□□□ -0.7
LMBR1-201ENST00000353442 LINC01551Q86U37 167 aa10.67□□□□□ -0.7
LMBR1-201ENST00000353442 LINC01559Q495D7 138 aa10.67□□□□□ -0.7
LMBR1-201ENST00000353442 Q9H8V8 135 aa10.66□□□□□ -0.7
LMBR1-201ENST00000353442 WIPF2Q8TF74 440 aaPredicted RBP10.66□□□□□ -0.7
LMBR1-201ENST00000353442 HIST2H2BCQ6DN03 193 aa10.66□□□□□ -0.7
LMBR1-201ENST00000353442 COX7A2LO14548 114 aa10.66□□□□□ -0.7
LMBR1-201ENST00000353442 FOXE3Q13461 319 aa10.66□□□□□ -0.7
LMBR1-201ENST00000353442 MRPL51Q4U2R6 128 aaKnown RBP10.66□□□□□ -0.7
LMBR1-201ENST00000353442 MPDZO75970 2070 aa10.66□□□□□ -0.7
LMBR1-201ENST00000353442 IGHG2P01859 326 aa10.66□□□□□ -0.7
LMBR1-201ENST00000353442 CSRP3P50461 194 aa10.65□□□□□ -0.7
LMBR1-201ENST00000353442 NMSQ5H8A3 153 aa10.65□□□□□ -0.7
LMBR1-201ENST00000353442 TRIOBPQ9H2D6 2365 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms