RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 RBPMS2Q6ZRY4 209 aaKnown RBP5.28□□□□□ -1.56
TRIM55-203ENST00000350034 LCNL1Q6ZST4 164 aa5.28□□□□□ -1.56
TRIM55-203ENST00000350034 C8orf86Q6ZUL3 223 aa5.28□□□□□ -1.56
TRIM55-203ENST00000350034 TCF24Q7RTU0 167 aa5.28□□□□□ -1.56
TRIM55-203ENST00000350034 GPHB5Q86YW7 130 aa5.28□□□□□ -1.56
TRIM55-203ENST00000350034 GATD1Q8NB37 220 aa5.28□□□□□ -1.56
TRIM55-203ENST00000350034 DAZAP1Q96EP5 407 aaKnown RBP5.28□□□□□ -1.56
TRIM55-203ENST00000350034 C8orf49Q96NF6 230 aa5.28□□□□□ -1.56
TRIM55-203ENST00000350034 C12orf57Q99622 126 aa5.28□□□□□ -1.56
TRIM55-203ENST00000350034 VGLL1Q99990 258 aa5.28□□□□□ -1.56
TRIM55-203ENST00000350034 NPFFR1Q9GZQ6 430 aa5.28□□□□□ -1.56
TRIM55-203ENST00000350034 PPP1R14DQ9NXH3 145 aa5.28□□□□□ -1.56
TRIM55-203ENST00000350034 PEF1Q9UBV8 284 aaKnown RBP5.28□□□□□ -1.56
TRIM55-203ENST00000350034 TP53TG3Q9ULZ0 132 aa5.28□□□□□ -1.56
TRIM55-203ENST00000350034 COL6A5A8TX70 2615 aa5.28□□□□□ -1.56
TRIM55-203ENST00000350034 IGHV3OR16-13A0A075B7E8 117 aa5.27□□□□□ -1.57
TRIM55-203ENST00000350034 IGHV3-49A0A0A0MS15 119 aa5.27□□□□□ -1.57
TRIM55-203ENST00000350034 IGHV3-74A0A0B4J1X5 117 aa5.27□□□□□ -1.57
TRIM55-203ENST00000350034 IGHV7-4-1A0A0J9YVY3 117 aa5.27□□□□□ -1.57
TRIM55-203ENST00000350034 A0A1W2PS18 150 aa5.27□□□□□ -1.57
TRIM55-203ENST00000350034 ZNF705FA8MVS1 300 aaPredicted RBP5.27□□□□□ -1.57
TRIM55-203ENST00000350034 PRAC2D3DTV9 90 aa5.27□□□□□ -1.57
TRIM55-203ENST00000350034 SPINK4O60575 86 aa5.27□□□□□ -1.57
TRIM55-203ENST00000350034 S100A2P29034 98 aa5.27□□□□□ -1.57
TRIM55-203ENST00000350034 LINC00310P59036 64 aa5.27□□□□□ -1.57
TRIM55-203ENST00000350034 SRSF2Q01130 221 aaKnown RBP5.27□□□□□ -1.57
TRIM55-203ENST00000350034 DNLZQ5SXM8 178 aa5.27□□□□□ -1.57
TRIM55-203ENST00000350034 IGFL4Q6B9Z1 124 aa5.27□□□□□ -1.57
TRIM55-203ENST00000350034 C10orf99Q6UWK7 81 aa5.27□□□□□ -1.57
TRIM55-203ENST00000350034 OR2D3Q8NGH3 330 aa5.27□□□□□ -1.57
TRIM55-203ENST00000350034 OR10D4PQ8NGN7 298 aa5.27□□□□□ -1.57
TRIM55-203ENST00000350034 ASCL2Q99929 193 aa5.27□□□□□ -1.57
TRIM55-203ENST00000350034 SMPXQ9UHP9 88 aa5.27□□□□□ -1.57
TRIM55-203ENST00000350034 A8MWP6 167 aa5.26□□□□□ -1.57
TRIM55-203ENST00000350034 NUPR1O60356 82 aa5.26□□□□□ -1.57
TRIM55-203ENST00000350034 SH2D1AO60880 128 aa5.26□□□□□ -1.57
TRIM55-203ENST00000350034 APCSP02743 223 aa5.26□□□□□ -1.57
TRIM55-203ENST00000350034 CT45A10P0DMU9 189 aa5.26□□□□□ -1.57
TRIM55-203ENST00000350034 PRB4P10163 310 aaPredicted RBP5.26□□□□□ -1.57
TRIM55-203ENST00000350034 CRISP2P16562 243 aa5.26□□□□□ -1.57
TRIM55-203ENST00000350034 ZNF80P51504 273 aaPredicted RBP5.26□□□□□ -1.57
TRIM55-203ENST00000350034 HBBP68871 147 aa5.26□□□□□ -1.57
TRIM55-203ENST00000350034 SLAQ13239 276 aa5.26□□□□□ -1.57
TRIM55-203ENST00000350034 PDZD11Q5EBL8 140 aa5.26□□□□□ -1.57
TRIM55-203ENST00000350034 PYY3Q5JQD4 70 aa5.26□□□□□ -1.57
TRIM55-203ENST00000350034 C9orf47Q6ZRZ4 202 aa5.26□□□□□ -1.57
TRIM55-203ENST00000350034 ZNF575Q86XF7 245 aa5.26□□□□□ -1.57
TRIM55-203ENST00000350034 TMEM256Q8N2U0 113 aa5.26□□□□□ -1.57
TRIM55-203ENST00000350034 RNF182Q8N6D2 247 aa5.26□□□□□ -1.57
TRIM55-203ENST00000350034 SIGLECL1Q8N7X8 197 aa5.26□□□□□ -1.57
TRIM55-203ENST00000350034 PACRGQ96M98 296 aaPredicted RBP5.26□□□□□ -1.57
TRIM55-203ENST00000350034 AGPAT4-IT1Q9H0P7 198 aa5.26□□□□□ -1.57
TRIM55-203ENST00000350034 DAZ1Q9NQZ3 744 aaKnown RBP5.26□□□□□ -1.57
TRIM55-203ENST00000350034 CSPG4Q6UVK1 2322 aa5.26□□□□□ -1.57
TRIM55-203ENST00000350034 MEGF8Q7Z7M0 2845 aa5.25□□□□□ -1.57
TRIM55-203ENST00000350034 A0A1B0GUS0 222 aa5.25□□□□□ -1.57
TRIM55-203ENST00000350034 GRIFINA4D1Z8 144 aa5.25□□□□□ -1.57
TRIM55-203ENST00000350034 LGALS9O00182 355 aa5.25□□□□□ -1.57
TRIM55-203ENST00000350034 CD5LO43866 347 aa5.25□□□□□ -1.57
TRIM55-203ENST00000350034 RPLP1P05386 114 aaKnown RBP5.25□□□□□ -1.57
TRIM55-203ENST00000350034 LGALS1P09382 135 aaKnown RBP5.25□□□□□ -1.57
TRIM55-203ENST00000350034 GZMBP10144 247 aa5.25□□□□□ -1.57
TRIM55-203ENST00000350034 FABP4P15090 132 aa5.25□□□□□ -1.57
TRIM55-203ENST00000350034 BMI1P35226 326 aa5.25□□□□□ -1.57
TRIM55-203ENST00000350034 RPS20P60866 119 aaKnown RBP5.25□□□□□ -1.57
TRIM55-203ENST00000350034 ERCC8Q13216 396 aa5.25□□□□□ -1.57
TRIM55-203ENST00000350034 KLF5Q13887 457 aaPredicted RBP5.25□□□□□ -1.57
TRIM55-203ENST00000350034 KIAA1644Q3SXP7 199 aa5.25□□□□□ -1.57
TRIM55-203ENST00000350034 FAM106AQ4KMX7 169 aa5.25□□□□□ -1.57
TRIM55-203ENST00000350034 TM4SF20Q53R12 229 aa5.25□□□□□ -1.57
TRIM55-203ENST00000350034 OR10J3Q5JRS4 329 aa5.25□□□□□ -1.57
TRIM55-203ENST00000350034 FAM162BQ5T6X4 162 aa5.25□□□□□ -1.57
TRIM55-203ENST00000350034 Q6AWC8 147 aa5.25□□□□□ -1.57
TRIM55-203ENST00000350034 REC114Q7Z4M0 266 aa5.25□□□□□ -1.57
TRIM55-203ENST00000350034 Q8TAT8 98 aa5.25□□□□□ -1.57
TRIM55-203ENST00000350034 PGLYRP4Q96LB8 373 aa5.25□□□□□ -1.57
TRIM55-203ENST00000350034 C20orf173Q96LM9 149 aa5.25□□□□□ -1.57
TRIM55-203ENST00000350034 UBE2E2Q96LR5 201 aa5.25□□□□□ -1.57
TRIM55-203ENST00000350034 NDFIP1Q9BT67 221 aa5.25□□□□□ -1.57
TRIM55-203ENST00000350034 RHPN1-AS1Q9BWJ2 59 aa5.25□□□□□ -1.57
TRIM55-203ENST00000350034 UFC1Q9Y3C8 167 aa5.25□□□□□ -1.57
TRIM55-203ENST00000350034 LENEPQ9Y5L5 61 aa5.25□□□□□ -1.57
TRIM55-203ENST00000350034 A0A1B0GUT8 65 aa5.24□□□□□ -1.57
TRIM55-203ENST00000350034 A0A1B0GW15 77 aa5.24□□□□□ -1.57
TRIM55-203ENST00000350034 TMEM213A2RRL7 107 aa5.24□□□□□ -1.57
TRIM55-203ENST00000350034 TMEM189A5PLL7 270 aa5.24□□□□□ -1.57
TRIM55-203ENST00000350034 FABP5P3A8MUU1 101 aa5.24□□□□□ -1.57
TRIM55-203ENST00000350034 OVOL1O14753 267 aa5.24□□□□□ -1.57
TRIM55-203ENST00000350034 SERF1AO75920 110 aa5.24□□□□□ -1.57
TRIM55-203ENST00000350034 IGLC6P0CF74 106 aa5.24□□□□□ -1.57
TRIM55-203ENST00000350034 ZNF138P52744 262 aa5.24□□□□□ -1.57
TRIM55-203ENST00000350034 RAB4BP61018 213 aa5.24□□□□□ -1.57
TRIM55-203ENST00000350034 RIGQ13278 110 aa5.24□□□□□ -1.57
TRIM55-203ENST00000350034 JOSD1Q15040 202 aaPredicted RBP5.24□□□□□ -1.57
TRIM55-203ENST00000350034 LINC01559Q495D7 138 aa5.24□□□□□ -1.57
TRIM55-203ENST00000350034 IL17RELQ6ZVW7 336 aa5.24□□□□□ -1.57
TRIM55-203ENST00000350034 TMEM18Q96B42 140 aa5.24□□□□□ -1.57
TRIM55-203ENST00000350034 C16orf92Q96LL3 132 aa5.24□□□□□ -1.57
TRIM55-203ENST00000350034 FAM19A4Q96LR4 140 aa5.24□□□□□ -1.57
TRIM55-203ENST00000350034 ALKBH7Q9BT30 221 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms