RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 CACNA1GO43497 2377 aa11.67□□□□□ -0.54
NUP50-201ENST00000347635 C22orf46C9J442 243 aa11.67□□□□□ -0.54
NUP50-201ENST00000347635 K7EP34 96 aa11.67□□□□□ -0.54
NUP50-201ENST00000347635 NPYP01303 97 aa11.67□□□□□ -0.54
NUP50-201ENST00000347635 PRSS57Q6UWY2 283 aa11.67□□□□□ -0.54
NUP50-201ENST00000347635 DPH3P1Q9H4G8 78 aa11.67□□□□□ -0.54
NUP50-201ENST00000347635 INS-IGF2F8WCM5 200 aa11.67□□□□□ -0.54
NUP50-201ENST00000347635 NDPQ00604 133 aa11.67□□□□□ -0.54
NUP50-201ENST00000347635 DEFB125Q8N687 156 aa11.67□□□□□ -0.54
NUP50-201ENST00000347635 Q8N8P6 123 aa11.67□□□□□ -0.54
NUP50-201ENST00000347635 ADORA2A-AS1P86434 159 aa11.66□□□□□ -0.54
NUP50-201ENST00000347635 RNF182Q8N6D2 247 aa11.66□□□□□ -0.54
NUP50-201ENST00000347635 ZNF491Q8N8L2 437 aa11.66□□□□□ -0.54
NUP50-201ENST00000347635 LINC01549A6NIU2 74 aa11.66□□□□□ -0.54
NUP50-201ENST00000347635 BRD3OSQ6XYD6 125 aa11.66□□□□□ -0.54
NUP50-201ENST00000347635 DUSP14O95147 198 aaKnown RBP11.66□□□□□ -0.54
NUP50-201ENST00000347635 GTSF1Q8WW33 167 aa11.66□□□□□ -0.54
NUP50-201ENST00000347635 GEMIN7Q9H840 131 aaKnown RBP11.66□□□□□ -0.54
NUP50-201ENST00000347635 LINC00527Q9UJ94 153 aa11.66□□□□□ -0.54
NUP50-201ENST00000347635 FAM120AOSQ5T036 256 aa11.66□□□□□ -0.54
NUP50-201ENST00000347635 IL17RELQ6ZVW7 336 aa11.66□□□□□ -0.54
NUP50-201ENST00000347635 Q8NA96 180 aa11.66□□□□□ -0.54
NUP50-201ENST00000347635 KLF12Q9Y4X4 402 aa11.66□□□□□ -0.54
NUP50-201ENST00000347635 SRD5A1P18405 259 aa11.65□□□□□ -0.54
NUP50-201ENST00000347635 CIRBPQ14011 172 aaKnown RBP11.65□□□□□ -0.54
NUP50-201ENST00000347635 RITA1Q96K30 269 aa11.65□□□□□ -0.54
NUP50-201ENST00000347635 TTC32Q5I0X7 151 aa11.65□□□□□ -0.54
NUP50-201ENST00000347635 SEM1Q6ZVN7 128 aa11.65□□□□□ -0.54
NUP50-201ENST00000347635 LINC00477Q96M19 166 aa11.65□□□□□ -0.54
NUP50-201ENST00000347635 SCRT2Q9NQ03 307 aa11.65□□□□□ -0.54
NUP50-201ENST00000347635 SIVA1O15304 175 aa11.65□□□□□ -0.54
NUP50-201ENST00000347635 IGLV2-8P01709 118 aa11.65□□□□□ -0.54
NUP50-201ENST00000347635 TNFRSF18Q9Y5U5 241 aa11.65□□□□□ -0.54
NUP50-201ENST00000347635 IGLV2-23P01705 113 aa11.64□□□□□ -0.55
NUP50-201ENST00000347635 Q96MF0 132 aa11.64□□□□□ -0.55
NUP50-201ENST00000347635 K7EP13 123 aa11.64□□□□□ -0.55
NUP50-201ENST00000347635 CDKN1BP46527 198 aa11.64□□□□□ -0.55
NUP50-201ENST00000347635 ITLN2Q8WWU7 325 aaPredicted RBP11.64□□□□□ -0.55
NUP50-201ENST00000347635 MSMPQ1L6U9 139 aa11.64□□□□□ -0.55
NUP50-201ENST00000347635 ADAMTSL5Q6ZMM2 481 aa11.64□□□□□ -0.55
NUP50-201ENST00000347635 TP53TG3Q9ULZ0 132 aa11.64□□□□□ -0.55
NUP50-201ENST00000347635 FAM110DQ8TAY7 271 aaPredicted RBP11.64□□□□□ -0.55
NUP50-201ENST00000347635 E7EUB6 86 aa11.63□□□□□ -0.55
NUP50-201ENST00000347635 TMEM219Q86XT9 240 aa11.63□□□□□ -0.55
NUP50-201ENST00000347635 C14orf178Q8N769 122 aaPredicted RBP11.63□□□□□ -0.55
NUP50-201ENST00000347635 LINC01545Q5VT33 79 aa11.63□□□□□ -0.55
NUP50-201ENST00000347635 COL5A1P20908 1838 aaPredicted RBP11.63□□□□□ -0.55
NUP50-201ENST00000347635 ROS1P08922 2347 aa11.63□□□□□ -0.55
NUP50-201ENST00000347635 NDUFS7O75251 213 aa11.63□□□□□ -0.55
NUP50-201ENST00000347635 COPS9Q8WXC6 57 aa11.63□□□□□ -0.55
NUP50-201ENST00000347635 NBASA2RRP1 2371 aa11.63□□□□□ -0.55
NUP50-201ENST00000347635 MRAP2Q96G30 205 aa11.63□□□□□ -0.55
NUP50-201ENST00000347635 ATG2AQ2TAZ0 1938 aa11.63□□□□□ -0.55
NUP50-201ENST00000347635 CHD3Q12873 2000 aaKnown RBP11.63□□□□□ -0.55
NUP50-201ENST00000347635 A0A1W2PPM0 123 aa11.63□□□□□ -0.55
NUP50-201ENST00000347635 VGLL1Q99990 258 aa11.63□□□□□ -0.55
NUP50-201ENST00000347635 OTOGLQ3ZCN5 2332 aa11.62□□□□□ -0.55
NUP50-201ENST00000347635 I3L2K1 104 aa11.62□□□□□ -0.55
NUP50-201ENST00000347635 C1orf229Q6ZS94 237 aaPredicted RBP11.62□□□□□ -0.55
NUP50-201ENST00000347635 CSTL1Q9H114 145 aa11.62□□□□□ -0.55
NUP50-201ENST00000347635 ZNF318Q5VUA4 2279 aa11.62□□□□□ -0.55
NUP50-201ENST00000347635 MRPL36Q9P0J6 103 aaKnown RBP11.62□□□□□ -0.55
NUP50-201ENST00000347635 UTF1Q5T230 341 aa11.61□□□□□ -0.55
NUP50-201ENST00000347635 DKK2Q9UBU2 259 aa11.61□□□□□ -0.55
NUP50-201ENST00000347635 DOCK10Q96BY6 2186 aa11.61□□□□□ -0.55
NUP50-201ENST00000347635 GRNP28799 593 aaKnown RBP11.61□□□□□ -0.55
NUP50-201ENST00000347635 GTSF1LQ9H1H1 148 aa11.61□□□□□ -0.55
NUP50-201ENST00000347635 A8MWV9 139 aa11.61□□□□□ -0.55
NUP50-201ENST00000347635 ATP6V0E1O15342 81 aa11.61□□□□□ -0.55
NUP50-201ENST00000347635 CGB3P0DN86 165 aa11.61□□□□□ -0.55
NUP50-201ENST00000347635 CGB7P0DN87 165 aa11.61□□□□□ -0.55
NUP50-201ENST00000347635 C19orf54Q5BKX5 351 aa11.61□□□□□ -0.55
NUP50-201ENST00000347635 EML5Q05BV3 1969 aa11.61□□□□□ -0.55
NUP50-201ENST00000347635 UBE2L6O14933 153 aa11.61□□□□□ -0.55
NUP50-201ENST00000347635 DLX4Q92988 240 aaPredicted RBP11.61□□□□□ -0.55
NUP50-201ENST00000347635 PGPEP1Q9NXJ5 209 aa11.61□□□□□ -0.55
NUP50-201ENST00000347635 ARHGAP21Q5T5U3 1957 aa11.61□□□□□ -0.55
NUP50-201ENST00000347635 CEP192Q8TEP8 1941 aa11.6□□□□□ -0.55
NUP50-201ENST00000347635 DTX2Q86UW9 622 aa11.6□□□□□ -0.55
NUP50-201ENST00000347635 FREM1Q5H8C1 2179 aa11.6□□□□□ -0.55
NUP50-201ENST00000347635 TRAV2A0A0B4J234 112 aa11.6□□□□□ -0.55
NUP50-201ENST00000347635 RNASE8Q8TDE3 154 aaKnown RBP11.6□□□□□ -0.55
NUP50-201ENST00000347635 WFDC12Q8WWY7 111 aa11.6□□□□□ -0.55
NUP50-201ENST00000347635 EML6Q6ZMW3 1958 aa11.6□□□□□ -0.55
NUP50-201ENST00000347635 IGHV3OR16-12A0A075B7B8 117 aa11.6□□□□□ -0.55
NUP50-201ENST00000347635 A0A1W2PRX2 142 aa11.6□□□□□ -0.55
NUP50-201ENST00000347635 EGR2P11161 476 aaPredicted RBP11.6□□□□□ -0.55
NUP50-201ENST00000347635 TRAV26-2A0A0B4J265 109 aa11.6□□□□□ -0.55
NUP50-201ENST00000347635 C2orf70A6NJV1 201 aa11.59□□□□□ -0.55
NUP50-201ENST00000347635 WISP2O76076 250 aa11.59□□□□□ -0.55
NUP50-201ENST00000347635 DUX3Q96PT4 197 aa11.59□□□□□ -0.55
NUP50-201ENST00000347635 IGKV1D-37A0A075B6S9 117 aa11.59□□□□□ -0.55
NUP50-201ENST00000347635 A0A1B0GXF2 115 aa11.59□□□□□ -0.55
NUP50-201ENST00000347635 DEFB113Q30KQ7 82 aa11.59□□□□□ -0.55
NUP50-201ENST00000347635 MEIG1Q5JSS6 88 aa11.59□□□□□ -0.55
NUP50-201ENST00000347635 RNF114Q9Y508 228 aa11.59□□□□□ -0.55
NUP50-201ENST00000347635 TRAV8-2A0A0B4J237 113 aa11.59□□□□□ -0.55
NUP50-201ENST00000347635 C19orf71A6NCJ1 209 aa11.59□□□□□ -0.55
NUP50-201ENST00000347635 IGKV1-17P01599 117 aa11.59□□□□□ -0.55
NUP50-201ENST00000347635 CEND1Q8N111 149 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms