RNA–Protein interactions for RNA: ENST00000346085.9

ARID1B-202, Transcript of AT-rich interaction domain 1B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARID1B, Length 10,194 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-202ENST00000346085 NRN1LQ496H8 165 aa14.28□□□□□ -0.12
ARID1B-202ENST00000346085 CELA2BP08218 269 aaPredicted RBP14.28□□□□□ -0.12
ARID1B-202ENST00000346085 CSPG4Q6UVK1 2322 aa14.28□□□□□ -0.12
ARID1B-202ENST00000346085 LTBP3Q9NS15 1303 aa14.28□□□□□ -0.12
ARID1B-202ENST00000346085 IGHV1-45A0A0A0MS14 117 aa14.28□□□□□ -0.12
ARID1B-202ENST00000346085 ATP5EP2Q5VTU8 51 aa14.28□□□□□ -0.12
ARID1B-202ENST00000346085 RFNGQ9Y644 331 aa14.28□□□□□ -0.12
ARID1B-202ENST00000346085 MRPL51Q4U2R6 128 aaKnown RBP14.28□□□□□ -0.12
ARID1B-202ENST00000346085 PDE6GP18545 87 aa14.28□□□□□ -0.12
ARID1B-202ENST00000346085 SUPT4H1P63272 117 aaKnown RBP14.28□□□□□ -0.12
ARID1B-202ENST00000346085 LINC01620Q4KN68 170 aa14.28□□□□□ -0.12
ARID1B-202ENST00000346085 FAM60AQ9NP50 221 aa14.28□□□□□ -0.12
ARID1B-202ENST00000346085 LCTP09848 1927 aa14.27□□□□□ -0.12
ARID1B-202ENST00000346085 CXCL10P02778 98 aa14.27□□□□□ -0.12
ARID1B-202ENST00000346085 SMIM2Q9BVW6 85 aa14.27□□□□□ -0.13
ARID1B-202ENST00000346085 HIGD1BQ9P298 99 aa14.27□□□□□ -0.13
ARID1B-202ENST00000346085 C9orf139Q6ZV77 190 aa14.27□□□□□ -0.13
ARID1B-202ENST00000346085 PDLIM4P50479 330 aa14.27□□□□□ -0.13
ARID1B-202ENST00000346085 NTN3O00634 580 aaPredicted RBP14.27□□□□□ -0.13
ARID1B-202ENST00000346085 NDUFS7O75251 213 aa14.26□□□□□ -0.13
ARID1B-202ENST00000346085 PRR31Q5SQ13 230 aa14.26□□□□□ -0.13
ARID1B-202ENST00000346085 UPK3BQ9BT76 320 aa14.26□□□□□ -0.13
ARID1B-202ENST00000346085 WISP3O95389 354 aaPredicted RBP14.26□□□□□ -0.13
ARID1B-202ENST00000346085 PMAIP1Q13794 54 aa14.26□□□□□ -0.13
ARID1B-202ENST00000346085 FANCD2OSQ96PS1 177 aa14.26□□□□□ -0.13
ARID1B-202ENST00000346085 ADAMTSL3P82987 1691 aa14.26□□□□□ -0.13
ARID1B-202ENST00000346085 A0A087WWL8 130 aa14.26□□□□□ -0.13
ARID1B-202ENST00000346085 ZFP36L2P47974 494 aaKnown RBP14.26□□□□□ -0.13
ARID1B-202ENST00000346085 FAM231DQ6ZW35 169 aa14.26□□□□□ -0.13
ARID1B-202ENST00000346085 TRBV12-3P01733 135 aa14.25□□□□□ -0.13
ARID1B-202ENST00000346085 B9A039 149 aa14.25□□□□□ -0.13
ARID1B-202ENST00000346085 SPSB3Q6PJ21 355 aa14.25□□□□□ -0.13
ARID1B-202ENST00000346085 RPL15P61313 204 aaKnown RBP14.25□□□□□ -0.13
ARID1B-202ENST00000346085 TRBV25-1A0A075B6N4 114 aa14.25□□□□□ -0.13
ARID1B-202ENST00000346085 TIMM17BO60830 172 aa14.25□□□□□ -0.13
ARID1B-202ENST00000346085 CLUHP3Q96NS8 147 aa14.25□□□□□ -0.13
ARID1B-202ENST00000346085 CHCHD2Q9Y6H1 151 aaPredicted RBP14.24□□□□□ -0.13
ARID1B-202ENST00000346085 M0QXV9 152 aa14.24□□□□□ -0.13
ARID1B-202ENST00000346085 PSCAO43653 123 aa14.24□□□□□ -0.13
ARID1B-202ENST00000346085 C5orf64Q2M2E5 130 aa14.24□□□□□ -0.13
ARID1B-202ENST00000346085 LHFPL1Q86WI0 220 aa14.24□□□□□ -0.13
ARID1B-202ENST00000346085 TMEM133Q9H2Q1 129 aa14.24□□□□□ -0.13
ARID1B-202ENST00000346085 TRBV7-1A0A0A6YYK4 115 aa14.24□□□□□ -0.13
ARID1B-202ENST00000346085 TRBV10-2A0A0K0K1G8 114 aa14.24□□□□□ -0.13
ARID1B-202ENST00000346085 Q8TAT8 98 aa14.24□□□□□ -0.13
ARID1B-202ENST00000346085 V9GYV3 84 aa14.24□□□□□ -0.13
ARID1B-202ENST00000346085 E9PQ18 207 aa14.23□□□□□ -0.13
ARID1B-202ENST00000346085 PCP2Q8IVA1 136 aa14.23□□□□□ -0.13
ARID1B-202ENST00000346085 WIPF2Q8TF74 440 aaPredicted RBP14.23□□□□□ -0.13
ARID1B-202ENST00000346085 A0A0G2JMZ2 1700 aa14.23□□□□□ -0.13
ARID1B-202ENST00000346085 LRRC37A2A6NM11 1700 aa14.23□□□□□ -0.13
ARID1B-202ENST00000346085 LRRC37AA6NMS7 1700 aa14.23□□□□□ -0.13
ARID1B-202ENST00000346085 LGALS9O00182 355 aa14.22□□□□□ -0.13
ARID1B-202ENST00000346085 C20orf78Q9BR46 151 aa14.22□□□□□ -0.13
ARID1B-202ENST00000346085 OTOGLQ3ZCN5 2332 aa14.22□□□□□ -0.13
ARID1B-202ENST00000346085 CECR9P0C854 216 aa14.22□□□□□ -0.13
ARID1B-202ENST00000346085 MT-ATP8P03928 68 aa14.21□□□□□ -0.13
ARID1B-202ENST00000346085 IL15RAQ13261 267 aa14.21□□□□□ -0.13
ARID1B-202ENST00000346085 MST1LQ2TV78 715 aa14.21□□□□□ -0.13
ARID1B-202ENST00000346085 HIGD2BQ4VC39 106 aa14.21□□□□□ -0.13
ARID1B-202ENST00000346085 COA6Q5JTJ3 125 aaKnown RBP14.21□□□□□ -0.13
ARID1B-202ENST00000346085 TRAV23DV6A0A075B6W5 121 aa14.21□□□□□ -0.13
ARID1B-202ENST00000346085 CDPF1Q6NVV7 123 aa14.21□□□□□ -0.14
ARID1B-202ENST00000346085 DEFB104AQ8WTQ1 72 aa14.21□□□□□ -0.14
ARID1B-202ENST00000346085 C15orf32Q32M92 178 aa14.2□□□□□ -0.14
ARID1B-202ENST00000346085 REPIN1Q9BWE0 567 aaKnown RBP14.2□□□□□ -0.14
ARID1B-202ENST00000346085 TMEM256-PLSCR3K7ERE1 68 aa14.2□□□□□ -0.14
ARID1B-202ENST00000346085 TMEM196Q5HYL7 178 aa14.2□□□□□ -0.14
ARID1B-202ENST00000346085 MRPL14Q6P1L8 145 aaKnown RBP14.2□□□□□ -0.14
ARID1B-202ENST00000346085 MRPS36P82909 103 aaKnown RBP14.2□□□□□ -0.14
ARID1B-202ENST00000346085 OPRPNQ99935 248 aaPredicted RBP14.2□□□□□ -0.14
ARID1B-202ENST00000346085 C2orf16Q68DN1 1984 aa14.19□□□□□ -0.14
ARID1B-202ENST00000346085 C20orf197Q8N268 126 aa14.19□□□□□ -0.14
ARID1B-202ENST00000346085 C3orf36Q3SXR2 165 aa14.19□□□□□ -0.14
ARID1B-202ENST00000346085 TMEM213A2RRL7 107 aa14.19□□□□□ -0.14
ARID1B-202ENST00000346085 SDHAF1A6NFY7 115 aa14.19□□□□□ -0.14
ARID1B-202ENST00000346085 TMEM61Q8N0U2 210 aa14.19□□□□□ -0.14
ARID1B-202ENST00000346085 COLQQ9Y215 455 aaPredicted RBP14.19□□□□□ -0.14
ARID1B-202ENST00000346085 C1orf162Q8NEQ5 155 aaPredicted RBP14.19□□□□□ -0.14
ARID1B-202ENST00000346085 PRDM6Q9NQX0 595 aa14.19□□□□□ -0.14
ARID1B-202ENST00000346085 NDPQ00604 133 aa14.18□□□□□ -0.14
ARID1B-202ENST00000346085 LINC00479Q96M42 142 aa14.18□□□□□ -0.14
ARID1B-202ENST00000346085 SMRP1Q8NCR6 262 aa14.18□□□□□ -0.14
ARID1B-202ENST00000346085 IMUPQ9GZP8 106 aa14.18□□□□□ -0.14
ARID1B-202ENST00000346085 C9JQL5 133 aa14.18□□□□□ -0.14
ARID1B-202ENST00000346085 RHOHQ15669 191 aa14.18□□□□□ -0.14
ARID1B-202ENST00000346085 DYNAPQ8N1N2 210 aa14.18□□□□□ -0.14
ARID1B-202ENST00000346085 LINC01465Q8N7H1 131 aa14.17□□□□□ -0.14
ARID1B-202ENST00000346085 UBE2E1P51965 193 aa14.17□□□□□ -0.14
ARID1B-202ENST00000346085 J3QRE1 110 aa14.17□□□□□ -0.14
ARID1B-202ENST00000346085 Q6ZT83 130 aa14.17□□□□□ -0.14
ARID1B-202ENST00000346085 ADAMTS9Q9P2N4 1935 aa14.17□□□□□ -0.14
ARID1B-202ENST00000346085 COX7B2Q8TF08 81 aa14.17□□□□□ -0.14
ARID1B-202ENST00000346085 SMIM9A6NGZ8 99 aa14.17□□□□□ -0.14
ARID1B-202ENST00000346085 RSPO2Q6UXX9 243 aaPredicted RBP14.17□□□□□ -0.14
ARID1B-202ENST00000346085 MDS2Q8NDY4 140 aa14.17□□□□□ -0.14
ARID1B-202ENST00000346085 LYZL4Q96KX0 146 aa14.17□□□□□ -0.14
ARID1B-202ENST00000346085 ZNF576Q9H609 170 aa14.16□□□□□ -0.14
ARID1B-202ENST00000346085 CCL21O00585 134 aa14.16□□□□□ -0.14
ARID1B-202ENST00000346085 VWC2Q2TAL6 325 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms