RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 IGHV3-73A0A0B4J1V6 119 aa12.94□□□□□ -0.34
SMARCA4-201ENST00000344626 PSCAO43653 123 aa12.94□□□□□ -0.34
SMARCA4-201ENST00000344626 RASL11AQ6T310 242 aa12.94□□□□□ -0.34
SMARCA4-201ENST00000344626 RNF182Q8N6D2 247 aa12.94□□□□□ -0.34
SMARCA4-201ENST00000344626 IGHV7-81A0A0B4J1V7 117 aa12.94□□□□□ -0.34
SMARCA4-201ENST00000344626 RHODO00212 210 aa12.94□□□□□ -0.34
SMARCA4-201ENST00000344626 CDX1P47902 265 aaPredicted RBP12.94□□□□□ -0.34
SMARCA4-201ENST00000344626 PAX9P55771 341 aa12.94□□□□□ -0.34
SMARCA4-201ENST00000344626 PCNX3Q9H6A9 2034 aa12.94□□□□□ -0.34
SMARCA4-201ENST00000344626 IGLC7A0M8Q6 106 aa12.94□□□□□ -0.34
SMARCA4-201ENST00000344626 TMEM242Q9NWH2 141 aa12.94□□□□□ -0.34
SMARCA4-201ENST00000344626 SMPXQ9UHP9 88 aa12.94□□□□□ -0.34
SMARCA4-201ENST00000344626 A0A087X0M5 115 aa12.93□□□□□ -0.34
SMARCA4-201ENST00000344626 A0A1B0GX30 115 aa12.93□□□□□ -0.34
SMARCA4-201ENST00000344626 SPINK13Q1W4C9 94 aa12.93□□□□□ -0.34
SMARCA4-201ENST00000344626 HBDP02042 147 aa12.93□□□□□ -0.34
SMARCA4-201ENST00000344626 ZNF876PQ49A33 203 aa12.93□□□□□ -0.34
SMARCA4-201ENST00000344626 ATP6V0BQ99437 205 aa12.93□□□□□ -0.34
SMARCA4-201ENST00000344626 GZMBP10144 247 aa12.93□□□□□ -0.34
SMARCA4-201ENST00000344626 CDKN1BP46527 198 aa12.93□□□□□ -0.34
SMARCA4-201ENST00000344626 SLURP1P55000 103 aa12.93□□□□□ -0.34
SMARCA4-201ENST00000344626 OR13C6PQ8NH95 151 aa12.93□□□□□ -0.34
SMARCA4-201ENST00000344626 PRRC2CQ9Y520 2896 aaKnown RBP12.93□□□□□ -0.34
SMARCA4-201ENST00000344626 TRAV8-1A0A0A6YYK1 113 aa12.93□□□□□ -0.34
SMARCA4-201ENST00000344626 TMEM89A2RUT3 159 aa12.92□□□□□ -0.34
SMARCA4-201ENST00000344626 LINC01551Q86U37 167 aa12.92□□□□□ -0.34
SMARCA4-201ENST00000344626 C5orf56Q8N8D9 126 aa12.92□□□□□ -0.34
SMARCA4-201ENST00000344626 SMR3AQ99954 134 aa12.92□□□□□ -0.34
SMARCA4-201ENST00000344626 CITED2Q99967 270 aaPredicted RBP12.92□□□□□ -0.34
SMARCA4-201ENST00000344626 GP9P14770 177 aa12.92□□□□□ -0.34
SMARCA4-201ENST00000344626 Q8N7P7 452 aa12.92□□□□□ -0.34
SMARCA4-201ENST00000344626 SRSF3P84103 164 aaKnown RBP12.92□□□□□ -0.34
SMARCA4-201ENST00000344626 VCYO14598 125 aa12.91□□□□□ -0.34
SMARCA4-201ENST00000344626 FSTL3O95633 263 aa12.91□□□□□ -0.34
SMARCA4-201ENST00000344626 EVI2AP22794 236 aa12.91□□□□□ -0.34
SMARCA4-201ENST00000344626 TRAV8-6A0A0B4J262 113 aa12.91□□□□□ -0.34
SMARCA4-201ENST00000344626 WIPF3A6NGB9 483 aa12.91□□□□□ -0.34
SMARCA4-201ENST00000344626 PFN1P07737 140 aaKnown RBP12.91□□□□□ -0.34
SMARCA4-201ENST00000344626 SLC25A2Q9BXI2 301 aa12.91□□□□□ -0.34
SMARCA4-201ENST00000344626 UQCR10Q9UDW1 63 aa12.91□□□□□ -0.34
SMARCA4-201ENST00000344626 EML6Q6ZMW3 1958 aa12.91□□□□□ -0.34
SMARCA4-201ENST00000344626 IGHV1OR15-1A0A075B7D0 117 aa12.9□□□□□ -0.34
SMARCA4-201ENST00000344626 LINC01559Q495D7 138 aa12.9□□□□□ -0.34
SMARCA4-201ENST00000344626 LBHQ53QV2 105 aaPredicted RBP12.9□□□□□ -0.34
SMARCA4-201ENST00000344626 H7C2G1 150 aa12.9□□□□□ -0.34
SMARCA4-201ENST00000344626 LINC00614P0C842 121 aa12.9□□□□□ -0.34
SMARCA4-201ENST00000344626 Q8N9W7 124 aa12.9□□□□□ -0.34
SMARCA4-201ENST00000344626 ZNF114Q8NC26 417 aa12.9□□□□□ -0.34
SMARCA4-201ENST00000344626 IGLV1-47P01700 117 aa12.9□□□□□ -0.34
SMARCA4-201ENST00000344626 DERL1Q9BUN8 251 aa12.9□□□□□ -0.34
SMARCA4-201ENST00000344626 OR5A1Q8NGJ0 315 aa12.9□□□□□ -0.34
SMARCA4-201ENST00000344626 CHD3Q12873 2000 aaKnown RBP12.9□□□□□ -0.34
SMARCA4-201ENST00000344626 NACAE9PAV3 2078 aa12.9□□□□□ -0.34
SMARCA4-201ENST00000344626 TNFRSF13BO14836 293 aaPredicted RBP12.89□□□□□ -0.35
SMARCA4-201ENST00000344626 LAGE3Q14657 143 aa12.89□□□□□ -0.35
SMARCA4-201ENST00000344626 FOXI2Q6ZQN5 318 aa12.89□□□□□ -0.35
SMARCA4-201ENST00000344626 TMEM170AQ8WVE7 144 aa12.89□□□□□ -0.35
SMARCA4-201ENST00000344626 MYCNOSP40205 109 aa12.89□□□□□ -0.35
SMARCA4-201ENST00000344626 KNCNA6PVL3 124 aa12.89□□□□□ -0.35
SMARCA4-201ENST00000344626 CFHR3Q02985 330 aa12.89□□□□□ -0.35
SMARCA4-201ENST00000344626 C14orf178Q8N769 122 aaPredicted RBP12.89□□□□□ -0.35
SMARCA4-201ENST00000344626 CHCHD1Q96BP2 118 aaKnown RBP12.89□□□□□ -0.35
SMARCA4-201ENST00000344626 SPAG8Q99932 426 aaPredicted RBP12.89□□□□□ -0.35
SMARCA4-201ENST00000344626 ZNF491Q8N8L2 437 aa12.89□□□□□ -0.35
SMARCA4-201ENST00000344626 GFRA4Q9GZZ7 299 aa12.89□□□□□ -0.35
SMARCA4-201ENST00000344626 ARMS2P0C7Q2 107 aa12.88□□□□□ -0.35
SMARCA4-201ENST00000344626 HAPLN4Q86UW8 402 aa12.88□□□□□ -0.35
SMARCA4-201ENST00000344626 ADMP35318 185 aa12.88□□□□□ -0.35
SMARCA4-201ENST00000344626 ZNF492Q9P255 531 aa12.88□□□□□ -0.35
SMARCA4-201ENST00000344626 SEC11AP67812 179 aa12.87□□□□□ -0.35
SMARCA4-201ENST00000344626 A8MWV9 139 aa12.87□□□□□ -0.35
SMARCA4-201ENST00000344626 NDUFA3O95167 84 aa12.87□□□□□ -0.35
SMARCA4-201ENST00000344626 MS4A6AQ9H2W1 248 aa12.87□□□□□ -0.35
SMARCA4-201ENST00000344626 ZNF25P17030 456 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-201ENST00000344626 AZU1P20160 251 aa12.86□□□□□ -0.35
SMARCA4-201ENST00000344626 ARHGAP32A7KAX9 2087 aa12.86□□□□□ -0.35
SMARCA4-201ENST00000344626 TRPT1Q86TN4 253 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-201ENST00000344626 IGHG2P01859 326 aa12.86□□□□□ -0.35
SMARCA4-201ENST00000344626 D6R8Y8 96 aa12.85□□□□□ -0.35
SMARCA4-201ENST00000344626 LYPD6Q86Y78 171 aa12.85□□□□□ -0.35
SMARCA4-201ENST00000344626 KLK9Q9UKQ9 250 aa12.85□□□□□ -0.35
SMARCA4-201ENST00000344626 IGLV11-55A0A075B6I3 123 aa12.85□□□□□ -0.35
SMARCA4-201ENST00000344626 NUP35Q8NFH5 326 aa12.85□□□□□ -0.35
SMARCA4-201ENST00000344626 SPXQ9BT56 116 aa12.85□□□□□ -0.35
SMARCA4-201ENST00000344626 IGKV3D-20A0A0C4DH25 116 aa12.85□□□□□ -0.35
SMARCA4-201ENST00000344626 LOC107984156A0A0G2JMH3 177 aa12.85□□□□□ -0.35
SMARCA4-201ENST00000344626 A6NDX4 124 aa12.85□□□□□ -0.35
SMARCA4-201ENST00000344626 ARL17AQ8IVW1 177 aa12.85□□□□□ -0.35
SMARCA4-201ENST00000344626 PIFOQ8TCI5 191 aa12.85□□□□□ -0.35
SMARCA4-201ENST00000344626 MRPL53Q96EL3 112 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-201ENST00000344626 CHTOPQ9Y3Y2 248 aaKnown RBP12.84□□□□□ -0.35
SMARCA4-201ENST00000344626 A0A087WWL8 130 aa12.84□□□□□ -0.35
SMARCA4-201ENST00000344626 LAMTOR2Q9Y2Q5 125 aa12.84□□□□□ -0.35
SMARCA4-201ENST00000344626 MORN3Q6PF18 240 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-201ENST00000344626 AJUBAQ96IF1 538 aa12.84□□□□□ -0.35
SMARCA4-201ENST00000344626 RBMY1BA6NDE4 496 aaKnown RBP12.84□□□□□ -0.35
SMARCA4-201ENST00000344626 RBMY1EA6NEQ0 496 aaKnown RBP12.84□□□□□ -0.35
SMARCA4-201ENST00000344626 DPM2O94777 84 aa12.84□□□□□ -0.35
SMARCA4-201ENST00000344626 RBMY1DP0C7P1 496 aaKnown RBP12.84□□□□□ -0.35
SMARCA4-201ENST00000344626 RBMY1A1P0DJD3 496 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms