RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 DEFB1P60022 68 aa12.21□□□□□ -0.46
CEACAM1-202ENST00000344391 ERCC8Q13216 396 aa12.21□□□□□ -0.46
CEACAM1-202ENST00000344391 RHEBQ15382 184 aa12.21□□□□□ -0.46
CEACAM1-202ENST00000344391 PSMG4Q5JS54 123 aa12.21□□□□□ -0.46
CEACAM1-202ENST00000344391 C9orf47Q6ZRZ4 202 aa12.21□□□□□ -0.46
CEACAM1-202ENST00000344391 NHLRC2Q8NBF2 726 aa12.21□□□□□ -0.46
CEACAM1-202ENST00000344391 OR2K2Q8NGT1 345 aa12.21□□□□□ -0.46
CEACAM1-202ENST00000344391 ISOC2Q96AB3 205 aa12.21□□□□□ -0.46
CEACAM1-202ENST00000344391 AGPAT4-IT1Q9H0P7 198 aa12.21□□□□□ -0.46
CEACAM1-202ENST00000344391 ZFP30Q9Y2G7 519 aa12.21□□□□□ -0.46
CEACAM1-202ENST00000344391 OR4C46A6NHA9 309 aa12.2□□□□□ -0.46
CEACAM1-202ENST00000344391 TMEM183AQ8IXX5 376 aa12.2□□□□□ -0.46
CEACAM1-202ENST00000344391 OR8A1Q8NGG7 326 aa12.2□□□□□ -0.46
CEACAM1-202ENST00000344391 ZNF256Q9Y2P7 627 aaPredicted RBP12.2□□□□□ -0.46
CEACAM1-202ENST00000344391 F6UB75 175 aa12.19□□□□□ -0.46
CEACAM1-202ENST00000344391 GCGP01275 180 aa12.19□□□□□ -0.46
CEACAM1-202ENST00000344391 ZNF705DP0CH99 300 aaPredicted RBP12.19□□□□□ -0.46
CEACAM1-202ENST00000344391 ZNF705BP0CI00 300 aaPredicted RBP12.19□□□□□ -0.46
CEACAM1-202ENST00000344391 WFDC9Q8NEX5 89 aa12.19□□□□□ -0.46
CEACAM1-202ENST00000344391 ASCL2Q99929 193 aa12.19□□□□□ -0.46
CEACAM1-202ENST00000344391 RPS10P5Q9NQ39 176 aa12.19□□□□□ -0.46
CEACAM1-202ENST00000344391 NOTCH3Q9UM47 2321 aa12.19□□□□□ -0.46
CEACAM1-202ENST00000344391 NPIPB6E9PJ23 425 aa12.19□□□□□ -0.46
CEACAM1-202ENST00000344391 SCO1O75880 301 aa12.19□□□□□ -0.46
CEACAM1-202ENST00000344391 MGST1P10620 155 aaKnown RBP12.19□□□□□ -0.46
CEACAM1-202ENST00000344391 OR5I1Q13606 314 aa12.19□□□□□ -0.46
CEACAM1-202ENST00000344391 TMEM78Q5T7P6 136 aa12.19□□□□□ -0.46
CEACAM1-202ENST00000344391 OR10J6PQ8NGY7 276 aa12.19□□□□□ -0.46
CEACAM1-202ENST00000344391 Q8TAT8 98 aa12.19□□□□□ -0.46
CEACAM1-202ENST00000344391 PRR25Q96S07 402 aa12.19□□□□□ -0.46
CEACAM1-202ENST00000344391 PPP1R14DQ9NXH3 145 aa12.19□□□□□ -0.46
CEACAM1-202ENST00000344391 INSL3P51460 131 aa12.18□□□□□ -0.46
CEACAM1-202ENST00000344391 ZNF138P52744 262 aa12.18□□□□□ -0.46
CEACAM1-202ENST00000344391 RNF212Q495C1 297 aa12.18□□□□□ -0.46
CEACAM1-202ENST00000344391 SAPCD1Q5SSQ6 148 aa12.18□□□□□ -0.46
CEACAM1-202ENST00000344391 LINC00477Q96M19 166 aa12.18□□□□□ -0.46
CEACAM1-202ENST00000344391 ZNF492Q9P255 531 aa12.18□□□□□ -0.46
CEACAM1-202ENST00000344391 A0A087WWC5 75 aa12.17□□□□□ -0.46
CEACAM1-202ENST00000344391 DEFB131AP59861 70 aa12.17□□□□□ -0.46
CEACAM1-202ENST00000344391 HIST1H1AQ02539 215 aaPredicted RBP12.17□□□□□ -0.46
CEACAM1-202ENST00000344391 C9orf66Q5T8R8 295 aa12.17□□□□□ -0.46
CEACAM1-202ENST00000344391 GDF5OSQ5U4N7 250 aa12.17□□□□□ -0.46
CEACAM1-202ENST00000344391 COX8CQ7Z4L0 72 aa12.17□□□□□ -0.46
CEACAM1-202ENST00000344391 GPR61Q9BZJ8 451 aa12.17□□□□□ -0.46
CEACAM1-202ENST00000344391 MAP6D1Q9H9H5 199 aa12.17□□□□□ -0.46
CEACAM1-202ENST00000344391 AGRNO00468 2067 aa12.16□□□□□ -0.46
CEACAM1-202ENST00000344391 A0A0J9YX75 114 aa12.16□□□□□ -0.46
CEACAM1-202ENST00000344391 MT-ND4LP03901 98 aa12.16□□□□□ -0.46
CEACAM1-202ENST00000344391 CD33P20138 364 aa12.16□□□□□ -0.46
CEACAM1-202ENST00000344391 ZC2HC1AQ96GY0 325 aa12.16□□□□□ -0.46
CEACAM1-202ENST00000344391 SFRP2Q96HF1 295 aa12.16□□□□□ -0.46
CEACAM1-202ENST00000344391 C8orf49Q96NF6 230 aa12.16□□□□□ -0.46
CEACAM1-202ENST00000344391 CT45A10P0DMU9 189 aa12.15□□□□□ -0.46
CEACAM1-202ENST00000344391 FOXI2Q6ZQN5 318 aa12.15□□□□□ -0.46
CEACAM1-202ENST00000344391 NDFIP1Q9BT67 221 aa12.15□□□□□ -0.46
CEACAM1-202ENST00000344391 MCRIP2Q9BUT9 160 aaKnown RBP12.15□□□□□ -0.46
CEACAM1-202ENST00000344391 SAV1Q9H4B6 383 aaPredicted RBP12.15□□□□□ -0.46
CEACAM1-202ENST00000344391 BIN3Q9NQY0 253 aa12.15□□□□□ -0.46
CEACAM1-202ENST00000344391 LENEPQ9Y5L5 61 aa12.15□□□□□ -0.46
CEACAM1-202ENST00000344391 BEAN1Q3B7T3 259 aa12.15□□□□□ -0.47
CEACAM1-202ENST00000344391 ODF3L2Q3SX64 289 aa12.15□□□□□ -0.47
CEACAM1-202ENST00000344391 PRR27Q6MZM9 219 aa12.15□□□□□ -0.47
CEACAM1-202ENST00000344391 EBLN2Q6P2I7 272 aa12.15□□□□□ -0.47
CEACAM1-202ENST00000344391 LINC00322Q6ZN03 302 aaPredicted RBP12.15□□□□□ -0.47
CEACAM1-202ENST00000344391 FAM231DQ6ZW35 169 aa12.15□□□□□ -0.47
CEACAM1-202ENST00000344391 ANAPC16Q96DE5 110 aa12.15□□□□□ -0.47
CEACAM1-202ENST00000344391 CTDSP1Q9GZU7 261 aa12.15□□□□□ -0.47
CEACAM1-202ENST00000344391 RNASE7Q9H1E1 156 aaKnown RBP12.15□□□□□ -0.47
CEACAM1-202ENST00000344391 OSTCQ9NRP0 149 aa12.15□□□□□ -0.47
CEACAM1-202ENST00000344391 ANK2Q01484 3957 aa12.15□□□□□ -0.47
CEACAM1-202ENST00000344391 ERVFC1-1P60608 527 aa12.14□□□□□ -0.47
CEACAM1-202ENST00000344391 LURAP1LQ8IV03 231 aa12.14□□□□□ -0.47
CEACAM1-202ENST00000344391 OR10G8Q8NGN5 311 aa12.14□□□□□ -0.47
CEACAM1-202ENST00000344391 FAM19A4Q96LR4 140 aa12.14□□□□□ -0.47
CEACAM1-202ENST00000344391 TMEM242Q9NWH2 141 aa12.14□□□□□ -0.47
CEACAM1-202ENST00000344391 C19orf71A6NCJ1 209 aa12.13□□□□□ -0.47
CEACAM1-202ENST00000344391 PPP1R2P9O14990 202 aa12.13□□□□□ -0.47
CEACAM1-202ENST00000344391 CRIP1P50238 77 aa12.13□□□□□ -0.47
CEACAM1-202ENST00000344391 IBA57Q5T440 356 aaKnown RBP12.13□□□□□ -0.47
CEACAM1-202ENST00000344391 CMYA5Q8N3K9 4069 aa12.13□□□□□ -0.47
CEACAM1-202ENST00000344391 TRBV7-9A0A0J9YWB2 115 aa12.12□□□□□ -0.47
CEACAM1-202ENST00000344391 H7BYZ3 331 aa12.12□□□□□ -0.47
CEACAM1-202ENST00000344391 DUSP14O95147 198 aaKnown RBP12.12□□□□□ -0.47
CEACAM1-202ENST00000344391 CMC4P56277 68 aaPredicted RBP12.12□□□□□ -0.47
CEACAM1-202ENST00000344391 ZNF124Q15973 351 aa12.12□□□□□ -0.47
CEACAM1-202ENST00000344391 SMUG1Q53HV7 270 aa12.12□□□□□ -0.47
CEACAM1-202ENST00000344391 TMEM88Q6PEY1 159 aa12.12□□□□□ -0.47
CEACAM1-202ENST00000344391 CBLN2Q8IUK8 224 aa12.12□□□□□ -0.47
CEACAM1-202ENST00000344391 C15orf54Q8N8G6 183 aa12.12□□□□□ -0.47
CEACAM1-202ENST00000344391 NUDT10Q8NFP7 164 aa12.12□□□□□ -0.47
CEACAM1-202ENST00000344391 NUDT11Q96G61 164 aa12.12□□□□□ -0.47
CEACAM1-202ENST00000344391 KNCNA6PVL3 124 aa12.11□□□□□ -0.47
CEACAM1-202ENST00000344391 OR11H12B2RN74 326 aa12.11□□□□□ -0.47
CEACAM1-202ENST00000344391 HLA-DRB4P13762 266 aa12.11□□□□□ -0.47
CEACAM1-202ENST00000344391 ZNF80P51504 273 aaPredicted RBP12.11□□□□□ -0.47
CEACAM1-202ENST00000344391 BTN1A1Q13410 526 aa12.11□□□□□ -0.47
CEACAM1-202ENST00000344391 APRG1Q8IVJ8 170 aa12.11□□□□□ -0.47
CEACAM1-202ENST00000344391 V9GYV3 84 aa12.11□□□□□ -0.47
CEACAM1-202ENST00000344391 HLA-DRB4X5D2U9 266 aa12.11□□□□□ -0.47
CEACAM1-202ENST00000344391 WIPF1O43516 503 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms