RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 A6NED7 52 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 MT-ATP8P03928 68 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 CD55P08174 381 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 BEAN1Q3B7T3 259 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 SH2D6Q7Z4S9 175 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 NCKAP5O14513 1909 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 CASP8AP2Q9UKL3 1982 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 TRBV25-1A0A075B6N4 114 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 AGPAT4-IT1Q9H0P7 198 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 ZNF561-AS1K7EIQ3 104 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 CCDC179H3BU77 68 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 CCL21O00585 134 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 CD52P31358 61 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 LINC01465Q8N7H1 131 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 PCNX3Q9H6A9 2034 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 IGHV1-58A0A0C4DH39 117 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 LYZL4Q96KX0 146 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 A0A0A6YYD4 124 aa3.03□□□□□ -1.93
SYNE2-202ENST00000344113 ADARB2-AS1A8MUL3 147 aa3.03□□□□□ -1.93
SYNE2-202ENST00000344113 C1orf61Q13536 156 aa3.03□□□□□ -1.93
SYNE2-202ENST00000344113 PCOLCEQ15113 449 aa3.03□□□□□ -1.93
SYNE2-202ENST00000344113 GFI1Q99684 422 aa3.03□□□□□ -1.93
SYNE2-202ENST00000344113 FAM216BQ8N7L0 139 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 NDUFA12Q9UI09 145 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 COL24A1Q17RW2 1714 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 TRAV23DV6A0A075B6W5 121 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 TRAV40A0A0B4J280 105 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 J3QLI3 93 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 RNASE7Q9H1E1 156 aaKnown RBP3.02□□□□□ -1.93
SYNE2-202ENST00000344113 A0A0U1RRA0 63 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 CCL4P13236 92 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 JMJD8Q96S16 334 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 CDIP1Q9H305 208 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 TOMM6Q96B49 74 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 C9orf85Q96MD7 179 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 C21orf62Q9NYP8 219 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 TMEM14CQ9P0S9 112 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 A0A1B0GXF2 115 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 ERC2-IT1O76042 136 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 MRPL53Q96EL3 112 aaKnown RBP3.02□□□□□ -1.93
SYNE2-202ENST00000344113 KLK15Q9H2R5 256 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 A0A0G2JNJ9 132 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 Q9UFV3 132 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 UBR2Q8IWV8 1755 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 THAP8Q8NA92 274 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 LTBP3Q9NS15 1303 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 NBR2O15453 112 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 SLURP2P0DP57 97 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 MUC7Q8TAX7 377 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 RITA1Q96K30 269 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 TANC2Q9HCD6 1990 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 A0A0J9YX75 114 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 SPAARA0A1B0GVQ0 90 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 Q8N976 141 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 MCRIP2Q9BUT9 160 aaKnown RBP3.02□□□□□ -1.93
SYNE2-202ENST00000344113 KLF16Q9BXK1 252 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-202ENST00000344113 PRSS22Q9GZN4 317 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 RPL35AP18077 110 aaKnown RBP3.02□□□□□ -1.93
SYNE2-202ENST00000344113 COX7A1P24310 79 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 IGLC6P0CF74 106 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 PMS2CLQ68D20 193 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 C2orf91Q6ZV80 131 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 PRSS12P56730 875 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-202ENST00000344113 DAZ2Q13117 558 aaKnown RBP3.02□□□□□ -1.93
SYNE2-202ENST00000344113 LENEPQ9Y5L5 61 aa3.02□□□□□ -1.93
SYNE2-202ENST00000344113 RBBP6Q7Z6E9 1792 aaKnown RBP3.02□□□□□ -1.93
SYNE2-202ENST00000344113 BGLAPP02818 100 aa3.01□□□□□ -1.93
SYNE2-202ENST00000344113 A0A1W2PRU2 124 aa3.01□□□□□ -1.93
SYNE2-202ENST00000344113 ZMAT4Q9H898 229 aa3.01□□□□□ -1.93
SYNE2-202ENST00000344113 FAM90A27PA6NNH2 459 aa3.01□□□□□ -1.93
SYNE2-202ENST00000344113 SAA2P0DJI9 122 aaPredicted RBP3.01□□□□□ -1.93
SYNE2-202ENST00000344113 Q8N1Y9 231 aa3.01□□□□□ -1.93
SYNE2-202ENST00000344113 KLHDC9Q8NEP7 349 aa3.01□□□□□ -1.93
SYNE2-202ENST00000344113 TIMM17AQ99595 171 aa3.01□□□□□ -1.93
SYNE2-202ENST00000344113 ALS2Q96Q42 1657 aa3.01□□□□□ -1.93
SYNE2-202ENST00000344113 UBE2D1P51668 147 aa3.01□□□□□ -1.93
SYNE2-202ENST00000344113 C1orf159Q96HA4 380 aa3.01□□□□□ -1.93
SYNE2-202ENST00000344113 AMELYQ99218 206 aa3.01□□□□□ -1.93
SYNE2-202ENST00000344113 LINC01546A6NGU7 62 aa3.01□□□□□ -1.93
SYNE2-202ENST00000344113 K7ERJ3 54 aa3.01□□□□□ -1.93
SYNE2-202ENST00000344113 DLEC1Q9Y238 1755 aa3.01□□□□□ -1.93
SYNE2-202ENST00000344113 AFDNP55196 1824 aaKnown RBP3.01□□□□□ -1.93
SYNE2-202ENST00000344113 SSC4DQ8WTU2 575 aa3.01□□□□□ -1.93
SYNE2-202ENST00000344113 NUPR1O60356 82 aa3.01□□□□□ -1.93
SYNE2-202ENST00000344113 MRPS21P82921 87 aaKnown RBP3.01□□□□□ -1.93
SYNE2-202ENST00000344113 CCL3P10147 92 aa3.01□□□□□ -1.93
SYNE2-202ENST00000344113 SDHAF1A6NFY7 115 aa3.01□□□□□ -1.93
SYNE2-202ENST00000344113 CNFNQ9BYD5 112 aa3.01□□□□□ -1.93
SYNE2-202ENST00000344113 ANKHD1Q8IWZ3 2542 aaKnown RBP3.01□□□□□ -1.93
SYNE2-202ENST00000344113 NTN3O00634 580 aaPredicted RBP3.01□□□□□ -1.93
SYNE2-202ENST00000344113 PRCDQ00LT1 54 aa3.01□□□□□ -1.93
SYNE2-202ENST00000344113 CCL4L1Q8NHW4 92 aa3.01□□□□□ -1.93
SYNE2-202ENST00000344113 C8orf49Q96NF6 230 aa3.01□□□□□ -1.93
SYNE2-202ENST00000344113 TRBV27A0A0K0K1C4 114 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 MORN5Q5VZ52 161 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 MIR17HGQ75NE6 70 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 FAM19A3Q7Z5A8 133 aa3□□□□□ -1.93
SYNE2-202ENST00000344113 ZNF501Q96CX3 271 aaPredicted RBP3□□□□□ -1.93
SYNE2-202ENST00000344113 SMIM14Q96QK8 99 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms