RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 IMMP1LQ96LU5 166 aa6.45□□□□□ -1.38
ATG4A-201ENST00000343524 SGK494Q96LW2 274 aa6.45□□□□□ -1.38
ATG4A-201ENST00000343524 FOXC2Q99958 501 aa6.45□□□□□ -1.38
ATG4A-201ENST00000343524 CALYQ9NYX4 217 aa6.45□□□□□ -1.38
ATG4A-201ENST00000343524 USF3Q68DE3 2245 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 C16orf97H3BN30 126 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 NPYP01303 97 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 SCGB1C2P0DMR2 95 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 COX6A1P12074 109 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 PSMB2P49721 201 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 C5orf47Q569G3 176 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 MORN3Q6PF18 240 aaPredicted RBP6.44□□□□□ -1.38
ATG4A-201ENST00000343524 NPIPB3Q92617 1050 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 CITED2Q99967 270 aaPredicted RBP6.44□□□□□ -1.38
ATG4A-201ENST00000343524 RASL11BQ9BPW5 248 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 FAM173AQ9BQD7 235 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 NDUFA4L2Q9NRX3 87 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 FAM90A27PA6NNH2 459 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 WNT9BO14905 357 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 ORM2P19652 201 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 COL8A2P25067 703 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 PPIFP30405 207 aaKnown RBP6.44□□□□□ -1.38
ATG4A-201ENST00000343524 PRDX2P32119 198 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 LEPP41159 167 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 NXPH1P58417 271 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 HIST2H2BCQ6DN03 193 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 GOLT1AQ6ZVE7 132 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 MDP1Q86V88 176 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 TUSC5Q8IXB3 177 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 AMN1Q8IY45 258 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 OR4C13Q8NGP0 309 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 MYOZ3Q8TDC0 251 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 TPPP3Q9BW30 176 aa6.44□□□□□ -1.38
ATG4A-201ENST00000343524 IGKV1D-37A0A075B6S9 117 aa6.43□□□□□ -1.38
ATG4A-201ENST00000343524 LOC107984156A0A0G2JMH3 177 aa6.43□□□□□ -1.38
ATG4A-201ENST00000343524 A0A1W2PPI3 338 aa6.43□□□□□ -1.38
ATG4A-201ENST00000343524 ZNF785A8K8V0 405 aa6.43□□□□□ -1.38
ATG4A-201ENST00000343524 BRI3O95415 125 aa6.43□□□□□ -1.38
ATG4A-201ENST00000343524 IGLV2-11P01706 119 aa6.43□□□□□ -1.38
ATG4A-201ENST00000343524 SAA1P0DJI8 122 aaPredicted RBP6.43□□□□□ -1.38
ATG4A-201ENST00000343524 ARL17AQ8IVW1 177 aa6.43□□□□□ -1.38
ATG4A-201ENST00000343524 FLYWCH2Q96CP2 140 aaKnown RBP6.43□□□□□ -1.38
ATG4A-201ENST00000343524 CARD19Q96LW7 228 aa6.43□□□□□ -1.38
ATG4A-201ENST00000343524 VPREB3Q9UKI3 123 aa6.43□□□□□ -1.38
ATG4A-201ENST00000343524 HIGD1AQ9Y241 93 aa6.43□□□□□ -1.38
ATG4A-201ENST00000343524 ZNF407Q9C0G0 2248 aa6.43□□□□□ -1.38
ATG4A-201ENST00000343524 RTTNQ86VV8 2226 aa6.43□□□□□ -1.38
ATG4A-201ENST00000343524 TRAV12-1A0A0B4J245 112 aa6.42□□□□□ -1.38
ATG4A-201ENST00000343524 FAM229AH3BQW9 127 aa6.42□□□□□ -1.38
ATG4A-201ENST00000343524 CCDC179H3BU77 68 aa6.42□□□□□ -1.38
ATG4A-201ENST00000343524 PLAUP00749 431 aa6.42□□□□□ -1.38
ATG4A-201ENST00000343524 UBE2D1P51668 147 aa6.42□□□□□ -1.38
ATG4A-201ENST00000343524 DIAPH2-AS1Q14236 149 aa6.42□□□□□ -1.38
ATG4A-201ENST00000343524 LYZL1Q6UWQ5 148 aa6.42□□□□□ -1.38
ATG4A-201ENST00000343524 MDFICQ9P1T7 246 aa6.42□□□□□ -1.38
ATG4A-201ENST00000343524 ITPR2Q14571 2701 aa6.42□□□□□ -1.38
ATG4A-201ENST00000343524 ZNF883P0CG24 379 aa6.42□□□□□ -1.38
ATG4A-201ENST00000343524 MYOD1P15172 320 aa6.42□□□□□ -1.38
ATG4A-201ENST00000343524 ZNF134P52741 427 aa6.42□□□□□ -1.38
ATG4A-201ENST00000343524 SRSF2Q01130 221 aaKnown RBP6.42□□□□□ -1.38
ATG4A-201ENST00000343524 ESPL1Q14674 2120 aa6.42□□□□□ -1.38
ATG4A-201ENST00000343524 C11orf53Q8IXP5 236 aa6.42□□□□□ -1.38
ATG4A-201ENST00000343524 ANKRD29Q8N6D5 301 aa6.42□□□□□ -1.38
ATG4A-201ENST00000343524 Q8N8P6 123 aa6.42□□□□□ -1.38
ATG4A-201ENST00000343524 PTH2Q96A98 100 aa6.42□□□□□ -1.38
ATG4A-201ENST00000343524 TTTY13Q9BZ97 58 aa6.42□□□□□ -1.38
ATG4A-201ENST00000343524 TMEM160Q9NX00 188 aa6.42□□□□□ -1.38
ATG4A-201ENST00000343524 TRAV8-2A0A0B4J237 113 aa6.41□□□□□ -1.38
ATG4A-201ENST00000343524 LINC01549A6NIU2 74 aa6.41□□□□□ -1.38
ATG4A-201ENST00000343524 CELA2AP08217 269 aa6.41□□□□□ -1.38
ATG4A-201ENST00000343524 ZNF826PQ6ZT77 177 aa6.41□□□□□ -1.38
ATG4A-201ENST00000343524 CD177Q8N6Q3 437 aa6.41□□□□□ -1.38
ATG4A-201ENST00000343524 TMEM167AQ8TBQ9 72 aa6.41□□□□□ -1.38
ATG4A-201ENST00000343524 NRGNQ92686 78 aa6.41□□□□□ -1.38
ATG4A-201ENST00000343524 DCTN5Q9BTE1 182 aa6.41□□□□□ -1.38
ATG4A-201ENST00000343524 UTP20O75691 2785 aaKnown RBP6.41□□□□□ -1.38
ATG4A-201ENST00000343524 TRAV40A0A0B4J280 105 aa6.4□□□□□ -1.38
ATG4A-201ENST00000343524 IGHV1OR15-9A0A0B4J2B8 117 aa6.4□□□□□ -1.38
ATG4A-201ENST00000343524 H7C1H1 209 aa6.4□□□□□ -1.38
ATG4A-201ENST00000343524 ZNHIT1O43257 154 aa6.4□□□□□ -1.38
ATG4A-201ENST00000343524 FOXG1P55316 489 aaPredicted RBP6.4□□□□□ -1.38
ATG4A-201ENST00000343524 MLANAQ16655 118 aa6.4□□□□□ -1.38
ATG4A-201ENST00000343524 MEIG1Q5JSS6 88 aa6.4□□□□□ -1.38
ATG4A-201ENST00000343524 ZNF71Q9NQZ8 489 aaPredicted RBP6.4□□□□□ -1.38
ATG4A-201ENST00000343524 MRPL35Q9NZE8 188 aaKnown RBP6.4□□□□□ -1.38
ATG4A-201ENST00000343524 DIDO1Q9BTC0 2240 aaKnown RBP6.4□□□□□ -1.38
ATG4A-201ENST00000343524 SETD2Q9BYW2 2564 aaPredicted RBP6.4□□□□□ -1.39
ATG4A-201ENST00000343524 TRAV8-1A0A0A6YYK1 113 aa6.4□□□□□ -1.39
ATG4A-201ENST00000343524 TMEM213A2RRL7 107 aa6.4□□□□□ -1.39
ATG4A-201ENST00000343524 SRRM5B3KS81 715 aa6.4□□□□□ -1.39
ATG4A-201ENST00000343524 F8VRH5 84 aa6.4□□□□□ -1.39
ATG4A-201ENST00000343524 K7EM74 188 aa6.4□□□□□ -1.39
ATG4A-201ENST00000343524 TIMM8AO60220 97 aaPredicted RBP6.4□□□□□ -1.39
ATG4A-201ENST00000343524 RFPL3SP0C7P2 107 aa6.4□□□□□ -1.39
ATG4A-201ENST00000343524 HES1Q14469 280 aa6.4□□□□□ -1.39
ATG4A-201ENST00000343524 SPRNQ5BIV9 151 aa6.4□□□□□ -1.39
ATG4A-201ENST00000343524 FAM159AQ6UWV7 190 aa6.4□□□□□ -1.39
ATG4A-201ENST00000343524 COX8CQ7Z4L0 72 aa6.4□□□□□ -1.39
ATG4A-201ENST00000343524 CXorf67Q86X51 503 aaPredicted RBP6.4□□□□□ -1.39
ATG4A-201ENST00000343524 MAPKAPK5-AS1Q8N8E1 139 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms