RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 ALKBH7Q9BT30 221 aaPredicted RBP14.32□□□□□ -0.12
HOXA9-201ENST00000343483 KRTDAPP60985 99 aa14.32□□□□□ -0.12
HOXA9-201ENST00000343483 KLF5Q13887 457 aaPredicted RBP14.32□□□□□ -0.12
HOXA9-201ENST00000343483 PRR31Q5SQ13 230 aa14.32□□□□□ -0.12
HOXA9-201ENST00000343483 KRTAP1-3Q8IUG1 177 aa14.32□□□□□ -0.12
HOXA9-201ENST00000343483 NDUFAF3Q9BU61 184 aa14.32□□□□□ -0.12
HOXA9-201ENST00000343483 RNF114Q9Y508 228 aa14.32□□□□□ -0.12
HOXA9-201ENST00000343483 BRI3O95415 125 aa14.31□□□□□ -0.12
HOXA9-201ENST00000343483 FSHBP01225 129 aa14.31□□□□□ -0.12
HOXA9-201ENST00000343483 C16orf54Q6UWD8 224 aa14.31□□□□□ -0.12
HOXA9-201ENST00000343483 HIVEP1P15822 2718 aa14.31□□□□□ -0.12
HOXA9-201ENST00000343483 IGKV2-40A0A087WW87 121 aaPredicted RBP14.3□□□□□ -0.12
HOXA9-201ENST00000343483 IGKV2D-40P01614 121 aaPredicted RBP14.3□□□□□ -0.12
HOXA9-201ENST00000343483 IGLV1-40P01703 118 aa14.3□□□□□ -0.12
HOXA9-201ENST00000343483 HLA-DMBP28068 263 aa14.3□□□□□ -0.12
HOXA9-201ENST00000343483 ACANP16112 2415 aa14.3□□□□□ -0.12
HOXA9-201ENST00000343483 KIR2DL5BA0A0G2JN68 375 aa14.3□□□□□ -0.12
HOXA9-201ENST00000343483 KIR2DL5BA0A0G2JPC4 375 aa14.3□□□□□ -0.12
HOXA9-201ENST00000343483 TEX43Q6ZNM6 134 aa14.3□□□□□ -0.12
HOXA9-201ENST00000343483 KIR2DL5AQ8N109 375 aa14.3□□□□□ -0.12
HOXA9-201ENST00000343483 FAM19A2Q8N3H0 131 aa14.3□□□□□ -0.12
HOXA9-201ENST00000343483 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.29□□□□□ -0.12
HOXA9-201ENST00000343483 SERTM2A0A1B0GWG4 89 aa14.29□□□□□ -0.12
HOXA9-201ENST00000343483 CHEK1O14757 476 aa14.29□□□□□ -0.12
HOXA9-201ENST00000343483 NTF3P20783 257 aa14.29□□□□□ -0.12
HOXA9-201ENST00000343483 CFHR3Q02985 330 aa14.29□□□□□ -0.12
HOXA9-201ENST00000343483 CYB5R2Q6BCY4 276 aa14.29□□□□□ -0.12
HOXA9-201ENST00000343483 PRSS57Q6UWY2 283 aa14.29□□□□□ -0.12
HOXA9-201ENST00000343483 LINC00469Q8N7U9 141 aa14.29□□□□□ -0.12
HOXA9-201ENST00000343483 OR4X2Q8NGF9 303 aa14.29□□□□□ -0.12
HOXA9-201ENST00000343483 CR1P17927 2039 aa14.29□□□□□ -0.12
HOXA9-201ENST00000343483 A0A087X0K7 114 aa14.29□□□□□ -0.12
HOXA9-201ENST00000343483 UNQ9165/PRO28630Q6UXU0 137 aa14.29□□□□□ -0.12
HOXA9-201ENST00000343483 VPREB3Q9UKI3 123 aa14.29□□□□□ -0.12
HOXA9-201ENST00000343483 A0A0G2JLM5 398 aa14.28□□□□□ -0.12
HOXA9-201ENST00000343483 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.28□□□□□ -0.12
HOXA9-201ENST00000343483 NIT1Q86X76 327 aa14.28□□□□□ -0.12
HOXA9-201ENST00000343483 WFDC11Q8NEX6 87 aa14.28□□□□□ -0.12
HOXA9-201ENST00000343483 FLNAP21333 2647 aaKnown RBP14.28□□□□□ -0.12
HOXA9-201ENST00000343483 IGHG4P01861 327 aa14.27□□□□□ -0.12
HOXA9-201ENST00000343483 TDRG1Q3Y452 100 aa14.27□□□□□ -0.12
HOXA9-201ENST00000343483 Q6YL49 198 aa14.27□□□□□ -0.12
HOXA9-201ENST00000343483 C9orf139Q6ZV77 190 aa14.27□□□□□ -0.12
HOXA9-201ENST00000343483 RNF182Q8N6D2 247 aa14.27□□□□□ -0.12
HOXA9-201ENST00000343483 C8orf49Q96NF6 230 aa14.27□□□□□ -0.12
HOXA9-201ENST00000343483 TEP1Q99973 2627 aaKnown RBP14.27□□□□□ -0.13
HOXA9-201ENST00000343483 HAX1O00165 279 aa14.27□□□□□ -0.13
HOXA9-201ENST00000343483 NDUFA4O00483 81 aa14.27□□□□□ -0.13
HOXA9-201ENST00000343483 HSBP1O75506 76 aa14.27□□□□□ -0.13
HOXA9-201ENST00000343483 CT45A10P0DMU9 189 aa14.27□□□□□ -0.13
HOXA9-201ENST00000343483 CRIP1P50238 77 aa14.27□□□□□ -0.13
HOXA9-201ENST00000343483 FOXA3P55318 350 aaPredicted RBP14.27□□□□□ -0.13
HOXA9-201ENST00000343483 RNASEKQ6P5S7 137 aaKnown RBP14.27□□□□□ -0.13
HOXA9-201ENST00000343483 U3KQE9 123 aa14.27□□□□□ -0.13
HOXA9-201ENST00000343483 LCN12Q6JVE5 192 aa14.26□□□□□ -0.13
HOXA9-201ENST00000343483 BORCS7Q96B45 105 aa14.26□□□□□ -0.13
HOXA9-201ENST00000343483 VAMP8Q9BV40 100 aa14.26□□□□□ -0.13
HOXA9-201ENST00000343483 HOXA3O43365 443 aaPredicted RBP14.26□□□□□ -0.13
HOXA9-201ENST00000343483 ARL6IP6Q8N6S5 226 aa14.26□□□□□ -0.13
HOXA9-201ENST00000343483 Q8N976 141 aa14.26□□□□□ -0.13
HOXA9-201ENST00000343483 Q8TAT8 98 aa14.26□□□□□ -0.13
HOXA9-201ENST00000343483 FOXC2Q99958 501 aa14.26□□□□□ -0.13
HOXA9-201ENST00000343483 VGLL1Q99990 258 aa14.26□□□□□ -0.13
HOXA9-201ENST00000343483 ZNF580Q9UK33 172 aa14.26□□□□□ -0.13
HOXA9-201ENST00000343483 F8P00451 2351 aa14.25□□□□□ -0.13
HOXA9-201ENST00000343483 SLC50A1Q9BRV3 221 aa14.25□□□□□ -0.13
HOXA9-201ENST00000343483 PAM16Q9Y3D7 125 aa14.25□□□□□ -0.13
HOXA9-201ENST00000343483 A0A1B0GUT8 65 aa14.24□□□□□ -0.13
HOXA9-201ENST00000343483 C3orf79P0CE67 100 aa14.24□□□□□ -0.13
HOXA9-201ENST00000343483 M0R2Z0 102 aa14.24□□□□□ -0.13
HOXA9-201ENST00000343483 C10orf99Q6UWK7 81 aa14.24□□□□□ -0.13
HOXA9-201ENST00000343483 C8orf86Q6ZUL3 223 aa14.24□□□□□ -0.13
HOXA9-201ENST00000343483 LOC102724200A0A096LPH7 203 aaPredicted RBP14.23□□□□□ -0.13
HOXA9-201ENST00000343483 SMAD7O15105 426 aaKnown RBP14.23□□□□□ -0.13
HOXA9-201ENST00000343483 PSMB8P28062 276 aa14.23□□□□□ -0.13
HOXA9-201ENST00000343483 RIGQ13278 110 aa14.23□□□□□ -0.13
HOXA9-201ENST00000343483 SAPCD1Q5SSQ6 148 aa14.23□□□□□ -0.13
HOXA9-201ENST00000343483 C20orf144Q9BQM9 153 aa14.23□□□□□ -0.13
HOXA9-201ENST00000343483 NPFFR1Q9GZQ6 430 aa14.23□□□□□ -0.13
HOXA9-201ENST00000343483 PRAC2D3DTV9 90 aa14.22□□□□□ -0.13
HOXA9-201ENST00000343483 ARMS2P0C7Q2 107 aa14.22□□□□□ -0.13
HOXA9-201ENST00000343483 FAM162BQ5T6X4 162 aa14.22□□□□□ -0.13
HOXA9-201ENST00000343483 GLMPQ8WWB7 406 aa14.22□□□□□ -0.13
HOXA9-201ENST00000343483 PRR25Q96S07 402 aa14.22□□□□□ -0.13
HOXA9-201ENST00000343483 FBLL1A6NHQ2 334 aaKnown RBP14.22□□□□□ -0.13
HOXA9-201ENST00000343483 URB1-AS1Q96HZ7 61 aa14.22□□□□□ -0.13
HOXA9-201ENST00000343483 TPPP3Q9BW30 176 aa14.22□□□□□ -0.13
HOXA9-201ENST00000343483 MXRA5Q9NR99 2828 aa14.22□□□□□ -0.13
HOXA9-201ENST00000343483 TRAV8-2A0A0B4J237 113 aa14.21□□□□□ -0.13
HOXA9-201ENST00000343483 SH2D1AO60880 128 aa14.21□□□□□ -0.13
HOXA9-201ENST00000343483 ERCC8Q13216 396 aa14.21□□□□□ -0.13
HOXA9-201ENST00000343483 Q6AWC8 147 aa14.21□□□□□ -0.13
HOXA9-201ENST00000343483 IL17RELQ6ZVW7 336 aa14.21□□□□□ -0.13
HOXA9-201ENST00000343483 DUX5Q96PT3 197 aa14.21□□□□□ -0.13
HOXA9-201ENST00000343483 NDFIP1Q9BT67 221 aa14.21□□□□□ -0.13
HOXA9-201ENST00000343483 PEF1Q9UBV8 284 aaKnown RBP14.21□□□□□ -0.13
HOXA9-201ENST00000343483 FAM181BA6NEQ2 426 aa14.21□□□□□ -0.14
HOXA9-201ENST00000343483 LBHQ53QV2 105 aaPredicted RBP14.21□□□□□ -0.14
HOXA9-201ENST00000343483 TMEM189A5PLL7 270 aa14.2□□□□□ -0.14
HOXA9-201ENST00000343483 M0QZ24 198 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms